1. Browse the Database
  2. View Redoxidase
Entry information : PplHalPrx04
Entry ID 6732
Creation 2009-04-30 (Christophe Dunand)
Last sequence changes 2009-04-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-17 (Catherine Mathe (Scipio))
Peroxidase information: PplHalPrx04
Name PplHalPrx04
Class Haloperoxidase (haem)    [Orthogroup: HalPrx001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Postia
Organism Postia placenta    [TaxId: 104341 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PplHalPrx04
start..stop		 S start..stop
PcHalPrx02 255 7.36e-82 1..283 1..284
PcarHalPrx04 251 8.64e-82 17..275 3..258
PcHalPrx03 234 5.73e-75 7..269 6..268
LbiHalPrx04 198 1.91e-61 7..275 14..253
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6732' 'join(413542..414807)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 413542..414807 1264  
join(413542..414807)


exon

Literature and cross-references PplHalPrx04
DNA ref. JGI genome:   scaffold_30 (413542..414807)
mRNA ref. JGI transcript:   127397
Protein sequence: PplHalPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   421
PWM (Da):   %s   46142.17  
PI (pH):   %s   6.59
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSASQEHTHQ HGECPVTGKT NGFCPAQTGD SRSPCPALNT LANHGYIPRD GKCITPHVLM HGLRKGYRLS APLAWVLVHG GFYLLGQRRQ RICLHDLSRH MCIEHDASLV HPDVEHRDEY  APIHVHQNML EALMGFSSDG HLMTPDDIAR ARVLREAEYL KPMDRLHAEI ARGEMAIVMH LFNNPAPDPS LPAHPPSFFG KLKRFFKGKC SASGQHHAQP LPGVPLDLLR VWLHEERLPD  GWEPYHHTGL VHTIEMSGRI RTEMNKLAKE VAKEKARLRS STEAEQEVIA AAVTAAPDEP PFGIVIEQGE IGDEPLSDPP HRYHHHHQLS PSGTLRSTAS TSSSASASLQ VETPITPDAA 
VPQTILELPV LTDSPPDSPQ VEEKITMITE LRPVRDISYS AGSEGELEGV AALPRVAVAA C 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 10 ESTs (sequence variability!!!).
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCGCCT CCCAAGAGCA CACCCACCAG CACGGCGAGT GTCCCGTCAC CGGCAAGACC AACGGCTTCT GTCCCGCACA AACGGGCGAC AGCCGCTCCC CCTGCCCCGC CCTCAACACC  CTTGCCAACC ACGGCTACAT TCCCCGCGAC GGCAAATGCA TCACCCCCCA CGTCCTCATG CACGGCCTCC GCAAGGGCTA CCGCCTCTCC GCGCCCCTCG CCTGGGTCCT CGTCCACGGC  GGCTTCTACC TCCTCGGCCA GCGCCGTCAG CGCATCTGCC TCCACGACCT CTCCCGCCAC ATGTGTATCG AGCACGACGC GTCCCTCGTC CACCCCGACG TCGAGCACCG CGACGAGTAC  GCCCCCATCC ACGTCCACCA GAACATGCTC GAGGCTCTCA TGGGCTTCTC CTCTGACGGC CACCTTATGA CTCCCGACGA CATCGCCCGC GCCCGCGTCC TCCGCGAGGC CGAGTACCTC  AAGCCCATGG ACCGCCTCCA CGCCGAGATC GCCCGCGGCG AGATGGCCAT CGTCATGCAC CTCTTCAACA ACCCCGCCCC CGATCCGTCC CTCCCCGCGC ACCCTCCCTC GTTCTTCGGC  AAGCTCAAGC GCTTCTTCAA GGGCAAGTGC TCCGCGTCGG GCCAGCACCA CGCGCAGCCG CTCCCCGGCG TCCCGCTCGA CCTCCTCCGT GTGTGGCTGC ACGAGGAGCG CCTGCCGGAC  GGCTGGGAGC CGTACCACCA CACGGGCCTC GTCCACACGA TCGAGATGTC GGGGCGCATC CGCACGGAGA TGAACAAGCT CGCGAAGGAG GTCGCAAAGG AGAAGGCGCG GCTGCGCTCC  AGCACGGAGG CGGAGCAAGA GGTCATCGCC GCCGCCGTCA CCGCCGCGCC CGACGAGCCG CCTTTCGGCA TTGTGATCGA GCAGGGCGAG ATCGGCGACG AGCCTCTCAG TGACCCGCCG  CACCGCTACC ACCATCATCA CCAACTCTCG CCGTCAGGGA CGCTCAGGAG CACGGCGTCG ACGAGCAGCT CGGCCTCGGC CAGTCTACAA GTAGAGACAC CTATCACTCC CGATGCCGCG  GTGCCGCAGA CGATCCTCGA GCTTCCCGTT CTCACAGACT CGCCGCCCGA CTCGCCGCAG GTTGAAGAAA AGATCACCAT GATCACCGAG CTGCGCCCCG TGCGCGATAT CTCGTACTCG 
GCGGGCAGCG AAGGGGAGCT GGAGGGCGTC GCGGCGTTGC CGAGGGTCGC GGTTGCCGCG TGTTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCGCCT CCCAAGAGCA CACCCACCAG CACGGCGAGT GTCCCGTCAC CGGCAAGACC AACGGCTTCT GTCCCGCACA AACGGGCGAC AGCCGCTCCC CCTGCCCCGC CCTCAACACC  CTTGCCAACC ACGGCTACAT TCCCCGCGAC GGCAAATGCA TCACCCCCCA CGTCCTCATG CACGGCCTCC GCAAGGGCTA CCGCCTCTCC GCGCCCCTCG CCTGGGTCCT CGTCCACGGC  GGCTTCTACC TCCTCGGCCA GCGCCGTCAG CGCATCTGCC TCCACGACCT CTCCCGCCAC ATGTGTATCG AGCACGACGC GTCCCTCGTC CACCCCGACG TCGAGCACCG CGACGAGTAC  GCCCCCATCC ACGTCCACCA GAACATGCTC GAGGCTCTCA TGGGCTTCTC CTCTGACGGC CACCTTATGA CTCCCGACGA CATCGCCCGC GCCCGCGTCC TCCGCGAGGC CGAGTACCTC  AAGCCCATGG ACCGCCTCCA CGCCGAGATC GCCCGCGGCG AGATGGCCAT CGTCATGCAC CTCTTCAACA ACCCCGCCCC CGATCCGTCC CTCCCCGCGC ACCCTCCCTC GTTCTTCGGC  AAGCTCAAGC GCTTCTTCAA GGGCAAGTGC TCCGCGTCGG GCCAGCACCA CGCGCAGCCG CTCCCCGGCG TCCCGCTCGA CCTCCTCCGT GTGTGGCTGC ACGAGGAGCG CCTGCCGGAC  GGCTGGGAGC CGTACCACCA CACGGGCCTC GTCCACACGA TCGAGATGTC GGGGCGCATC CGCACGGAGA TGAACAAGCT CGCGAAGGAG GTCGCAAAGG AGAAGGCGCG GCTGCGCTCC  AGCACGGAGG CGGAGCAAGA GGTCATCGCC GCCGCCGTCA CCGCCGCGCC CGACGAGCCG CCTTTCGGCA TTGTGATCGA GCAGGGCGAG ATCGGCGACG AGCCTCTCAG TGACCCGCCG  CACCGCTACC ACCATCATCA CCAACTCTCG CCGTCAGGGA CGCTCAGGAG CACGGCGTCG ACGAGCAGCT CGGCCTCGGC CAGTCTACAA GTAGAGACAC CTATCACTCC CGATGCCGCG  GTGCCGCAGA CGATCCTCGA GCTTCCCGTT CTCACAGACT CGCCGCCCGA CTCGCCGCAG GTTGAAGAAA AGATCACCAT GATCACCGAG CTGCGCCCCG TGCGCGATAT CTCGTACTCG 
GCGGGCAGCG AAGGGGAGCT GGAGGGCGTC GCGGCGTTGC CGAGGGTCGC GGTTGCCGCG TGTTAA 

Retrieve as FASTA