Entry information : PcHalPrx02
Entry ID 6736
Creation 2009-05-01 (Christophe Dunand)
Last sequence changes 2009-05-01 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-28 (Catherine Mathe (Scipio))
Peroxidase information: PcHalPrx02
Name PcHalPrx02
Class Haloperoxidase (haem)    [Orthogroup: HalPrx001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete chrysosporium    [TaxId: 5306 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcHalPrx02
start..stop
S start..stop
PcarHalPrx04 377 8e-132 24..273 7..256
PcHalPrx03 364 2e-126 1..283 1..278
PplHalPrx04 261 5e-84 1..299 1..298
LbiHalPrx04 180 6e-55 13..273 21..247
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3018139..3019305 1167  
complement(join(3018139..3019305))


exon

Literature and cross-references PcHalPrx02
DNA ref. JGI genome:   scaffold_2 (3019305..3018139)
EST ref. GenBank:   DV758009.1 [5' end]   DV757205.1 [3' end]   DV757443.1 [Fragment]
Protein sequence: PcHalPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   388
PWM (Da):   %s   41760.6  
PI (pH):   %s   4.92
Sequence
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Send to Peroxiscan
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MSSSSQASMD DKCPVTGLTG PNPHAFSPPQ EGDSRAPCPA MNSMANHGYL PRDGKGITAD IIIDALMKCF RLSKPLAWAL THGALTLLDQ GSAPFELHDL ARHNKVEHDA SLYHPNAGPR  EEYAPIHGDA ELLKDFFATS ADGRVMTPED VARVRVRREA ETPLDLVHAE LARGEMAIVL NMFNNPDAAL HEAGVPLQPR GTLSHIVRAL LGRKDTGANR QLDGVPIERM RYWFENERLP  PDWEPYHETT LLETISTINR LRSAMSGMRK ASAGDELGTR GSAKADAAVE APAAAGGVDV CKDKQTSSDA ELTDDDNADG VPSLVHSRSA TSETFNDLPP TPQASQVVMP PIFGDTKGAA 
LRVVGDESGF RKELIEGEMG REEVSVMA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 57 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAGCT CTTCCCAAGC ATCCATGGAC GACAAATGCC CCGTCACCGG CCTTACCGGT CCGAATCCAC ACGCTTTCTC TCCGCCGCAG GAGGGAGACA GCCGAGCACC GTGCCCGGCC  ATGAACTCGA TGGCGAATCA TGGCTACCTC CCACGAGACG GCAAGGGCAT CACGGCAGAC ATCATCATTG ACGCGCTCAT GAAGTGCTTC CGTCTCTCAA AACCGCTCGC CTGGGCACTC  ACTCACGGTG CTCTAACGCT TCTCGACCAG GGCTCGGCTC CGTTCGAGCT GCACGACCTC GCACGGCACA ACAAGGTCGA GCACGACGCG AGTCTCTACC ACCCGAACGC AGGCCCACGC  GAAGAGTACG CACCCATCCA TGGCGACGCG GAGCTGCTCA AGGACTTCTT CGCGACATCT GCGGACGGAC GCGTCATGAC GCCGGAGGAC GTCGCCCGCG TGCGGGTGCG GCGCGAGGCA  GAGACACCGC TCGATCTCGT GCATGCCGAG CTCGCGCGCG GCGAGATGGC GATCGTGCTC AACATGTTCA ACAACCCGGA CGCGGCGCTG CACGAGGCGG GCGTGCCGCT GCAGCCGCGC  GGGACGCTCT CGCACATCGT GCGCGCGCTG CTGGGCCGCA AGGACACAGG CGCGAACCGA CAGCTCGATG GCGTGCCCAT CGAGCGCATG CGCTACTGGT TCGAAAACGA GCGGCTCCCG  CCCGACTGGG AGCCGTACCA CGAGACGACG CTCCTCGAGA CTATCAGCAC GATCAACCGC CTACGGAGCG CGATGAGCGG CATGCGGAAG GCCAGCGCGG GAGATGAGCT GGGGACGAGA  GGCAGCGCCA AGGCGGACGC GGCCGTGGAG GCTCCGGCGG CCGCAGGGGG CGTCGACGTC TGCAAGGACA AGCAGACGTC GAGCGACGCG GAGCTCACGG ATGACGACAA CGCCGATGGG  GTCCCCTCGC TCGTGCACTC GCGCAGCGCG ACTAGCGAGA CGTTTAATGA CCTACCGCCG ACGCCCCAGG CCTCGCAGGT TGTCATGCCG CCAATTTTCG GCGATACAAA GGGCGCGGCG 
TTGCGCGTGG TTGGAGACGA GTCCGGGTTC CGAAAGGAGC TGATAGAAGG CGAGATGGGG AGGGAAGAGG TGTCTGTTAT GGCGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAGCT CTTCCCAAGC ATCCATGGAC GACAAATGCC CCGTCACCGG CCTTACCGGT CCGAATCCAC ACGCTTTCTC TCCGCCGCAG GAGGGAGACA GCCGAGCACC GTGCCCGGCC  ATGAACTCGA TGGCGAATCA TGGCTACCTC CCACGAGACG GCAAGGGCAT CACGGCAGAC ATCATCATTG ACGCGCTCAT GAAGTGCTTC CGTCTCTCAA AACCGCTCGC CTGGGCACTC  ACTCACGGTG CTCTAACGCT TCTCGACCAG GGCTCGGCTC CGTTCGAGCT GCACGACCTC GCACGGCACA ACAAGGTCGA GCACGACGCG AGTCTCTACC ACCCGAACGC AGGCCCACGC  GAAGAGTACG CACCCATCCA TGGCGACGCG GAGCTGCTCA AGGACTTCTT CGCGACATCT GCGGACGGAC GCGTCATGAC GCCGGAGGAC GTCGCCCGCG TGCGGGTGCG GCGCGAGGCA  GAGACACCGC TCGATCTCGT GCATGCCGAG CTCGCGCGCG GCGAGATGGC GATCGTGCTC AACATGTTCA ACAACCCGGA CGCGGCGCTG CACGAGGCGG GCGTGCCGCT GCAGCCGCGC  GGGACGCTCT CGCACATCGT GCGCGCGCTG CTGGGCCGCA AGGACACAGG CGCGAACCGA CAGCTCGATG GCGTGCCCAT CGAGCGCATG CGCTACTGGT TCGAAAACGA GCGGCTCCCG  CCCGACTGGG AGCCGTACCA CGAGACGACG CTCCTCGAGA CTATCAGCAC GATCAACCGC CTACGGAGCG CGATGAGCGG CATGCGGAAG GCCAGCGCGG GAGATGAGCT GGGGACGAGA  GGCAGCGCCA AGGCGGACGC GGCCGTGGAG GCTCCGGCGG CCGCAGGGGG CGTCGACGTC TGCAAGGACA AGCAGACGTC GAGCGACGCG GAGCTCACGG ATGACGACAA CGCCGATGGG  GTCCCCTCGC TCGTGCACTC GCGCAGCGCG ACTAGCGAGA CGTTTAATGA CCTACCGCCG ACGCCCCAGG CCTCGCAGGT TGTCATGCCG CCAATTTTCG GCGATACAAA GGGCGCGGCG 
TTGCGCGTGG TTGGAGACGA GTCCGGGTTC CGAAAGGAGC TGATAGAAGG CGAGATGGGG AGGGAAGAGG TGTCTGTTAT GGCGTGA 

Retrieve as FASTA