Entry information : PcHalPrx03
Entry ID 6738
Creation 2009-05-01 (Christophe Dunand)
Last sequence changes 2011-12-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-28 (Catherine Mathe (Scipio))
Peroxidase information: PcHalPrx03
Name PcHalPrx03
Class Haloperoxidase (haem)    [Orthogroup: HalPrx001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete chrysosporium    [TaxId: 5306 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcHalPrx03
start..stop
S start..stop
PcHalPrx02 363 3e-126 1..278 1..283
PcarHalPrx04 331 2e-115 20..278 3..262
PplHalPrx04 234 4e-75 6..268 7..269
AbHalPrx02_bisporus 198 4e-63 5..275 19..267
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1198662..1199501 840  
complement(join(1198662..1199501))


exon

Literature and cross-references PcHalPrx03
DNA ref. JGI genome:   scaffold_10 (1199501..1198662)
EST ref. GenBank:   DV759560.1 [Fragment]
Protein sequence: PcHalPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   279
PWM (Da):   %s   30176.01  
PI (pH):   %s   8.63
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSNGTHSHNA GRCPSADTLA ASAHEFCPPQ PGDSRSPCPA VNTLANHGYL PRDGKGVTAA QTVDALIACY RLSRPLAWAL AYGTILRLRQ GTSFDLHDLA QHNVVEHDAS LYHPNADGQK  YAPIHGDADL LDAFFKTPTD GRVMSPDDIA RVRVRREALT PLNAVQAAVA RGEMAVILNM FNNPDPSMHS AGVPLQPRSF FSSLAHALSG RHDTAANRGL DGVPINRLRY WFENEQLPPG 
WEPYHTTTLF DTVTSMSRLQ RAMARAQKGK GNASRGKAD 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and 1 EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTAACG GCACACACTC GCACAACGCA GGGCGCTGTC CCTCAGCCGA CACACTCGCC GCGAGTGCTC ACGAGTTCTG CCCACCCCAA CCAGGCGACA GCCGCTCCCC TTGCCCTGCT  GTGAACACCC TGGCGAACCA CGGCTATCTT CCGCGCGATG GCAAGGGCGT CACTGCCGCG CAGACCGTCG ATGCACTCAT TGCGTGCTAT CGCCTATCCC GCCCGCTCGC ATGGGCCCTC  GCTTACGGCA CCATACTTCG CCTCCGTCAA GGGACCTCCT TCGATCTCCA TGACCTCGCG CAGCACAACG TCGTCGAGCA CGATGCGAGC CTCTATCATC CGAACGCGGA TGGACAGAAG  TACGCGCCGA TCCATGGCGA CGCTGACCTC CTCGACGCCT TCTTCAAGAC ACCCACAGAC GGGCGTGTTA TGTCTCCTGA TGACATTGCC CGTGTACGTG TTCGCCGCGA GGCTCTCACA  CCGCTCAATG CCGTGCAAGC TGCAGTTGCA CGCGGTGAAA TGGCCGTCAT ACTCAACATG TTCAACAACC CTGACCCCTC AATGCATAGC GCCGGTGTAC CTCTGCAGCC ACGGAGCTTC  TTCTCGTCGC TTGCTCATGC ATTATCGGGG AGGCACGACA CTGCGGCCAA CAGGGGGTTA GATGGTGTGC CAATCAACCG GCTGCGCTAC TGGTTTGAGA ACGAGCAGTT GCCACCGGGT  TGGGAGCCGT ATCATACTAC CACTCTCTTC GACACAGTCA CCTCAATGAG CCGACTCCAG AGGGCAATGG CTAGAGCTCA GAAGGGGAAG GGGAATGCAT CAAGGGGTAA AGCTGATTAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTAACG GCACACACTC GCACAACGCA GGGCGCTGTC CCTCAGCCGA CACACTCGCC GCGAGTGCTC ACGAGTTCTG CCCACCCCAA CCAGGCGACA GCCGCTCCCC TTGCCCTGCT  GTGAACACCC TGGCGAACCA CGGCTATCTT CCGCGCGATG GCAAGGGCGT CACTGCCGCG CAGACCGTCG ATGCACTCAT TGCGTGCTAT CGCCTATCCC GCCCGCTCGC ATGGGCCCTC  GCTTACGGCA CCATACTTCG CCTCCGTCAA GGGACCTCCT TCGATCTCCA TGACCTCGCG CAGCACAACG TCGTCGAGCA CGATGCGAGC CTCTATCATC CGAACGCGGA TGGACAGAAG  TACGCGCCGA TCCATGGCGA CGCTGACCTC CTCGACGCCT TCTTCAAGAC ACCCACAGAC GGGCGTGTTA TGTCTCCTGA TGACATTGCC CGTGTACGTG TTCGCCGCGA GGCTCTCACA  CCGCTCAATG CCGTGCAAGC TGCAGTTGCA CGCGGTGAAA TGGCCGTCAT ACTCAACATG TTCAACAACC CTGACCCCTC AATGCATAGC GCCGGTGTAC CTCTGCAGCC ACGGAGCTTC  TTCTCGTCGC TTGCTCATGC ATTATCGGGG AGGCACGACA CTGCGGCCAA CAGGGGGTTA GATGGTGTGC CAATCAACCG GCTGCGCTAC TGGTTTGAGA ACGAGCAGTT GCCACCGGGT  TGGGAGCCGT ATCATACTAC CACTCTCTTC GACACAGTCA CCTCAATGAG CCGACTCCAG AGGGCAATGG CTAGAGCTCA GAAGGGGAAG GGGAATGCAT CAAGGGGTAA AGCTGATTAG 

Retrieve as FASTA