View Redoxidase 6738

Entry information : PcHalPrx03

Entry ID	6738
Creation	2009-05-01 (Christophe Dunand)
Last sequence changes	2011-12-14 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-03-28 (Catherine Mathe (Scipio))

Peroxidase information: PcHalPrx03

Name

PcHalPrx03

Class

Haloperoxidase (haem) [Orthogroup: HalPrx001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete

Organism

Phanerochaete chrysosporium [TaxId: 5306 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PcHalPrx03 start..stop	S start..stop
PcHalPrx02	363	2.83e-126	1..278	1..283
PcarHalPrx04	331	1.86e-115	20..278	3..262
PplHalPrx04	234	4.99e-75	6..268	7..269
AbHalPrx02_bisporus	198	4.98e-63	5..275	19..267

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1198662..1199501	838
complement(join(1198662..1199501))

Literature and cross-references PcHalPrx03

DNA ref.	JGI genome: scaffold_10 (1199501..1198662)
EST ref.	GenBank: DV759560.1 [Fragment]

Protein sequence: PcHalPrx03

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	279 (300)
PWM (Da):	30176.01 (32240.6)	Transmb domain:	i7-29o
PI (pH):	8.63 (8.89)	Peptide Signal:	cut: 28 range:28-327

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MSNGTHSHNA GRCPSADTLA ASAHEFCPPQ PGDSRSPCPA VNTLANHGYL PRDGKGVTAA QTVDALIACY RLSRPLAWAL AYGTILRLRQ GTSFDLHDLA QHNVVEHDAS LYHPNADGQK YAPIHGDADL LDAFFKTPTD GRVMSPDDIA RVRVRREALT PLNAVQAAVA RGEMAVILNM FNNPDPSMHS AGVPLQPRSF FSSLAHALSG RHDTAANRGL DGVPINRLRY WFENEQLPPG
WEPYHTTTLF DTVTSMSRLQ RAMARAQKGK GNASRGKAD

Retrieve as FASTA

Remarks

Complete sequence from genomic (no intron) and 1 EST.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGTCTAACG GCACACACTC GCACAACGCA GGGCGCTGTC CCTCAGCCGA CACACTCGCC GCGAGTGCTC ACGAGTTCTG CCCACCCCAA CCAGGCGACA GCCGCTCCCC TTGCCCTGCT GTGAACACCC TGGCGAACCA CGGCTATCTT CCGCGCGATG GCAAGGGCGT CACTGCCGCG CAGACCGTCG ATGCACTCAT TGCGTGCTAT CGCCTATCCC GCCCGCTCGC ATGGGCCCTC GCTTACGGCA CCATACTTCG CCTCCGTCAA GGGACCTCCT TCGATCTCCA TGACCTCGCG CAGCACAACG TCGTCGAGCA CGATGCGAGC CTCTATCATC CGAACGCGGA TGGACAGAAG TACGCGCCGA TCCATGGCGA CGCTGACCTC CTCGACGCCT TCTTCAAGAC ACCCACAGAC GGGCGTGTTA TGTCTCCTGA TGACATTGCC CGTGTACGTG TTCGCCGCGA GGCTCTCACA CCGCTCAATG CCGTGCAAGC TGCAGTTGCA CGCGGTGAAA TGGCCGTCAT ACTCAACATG TTCAACAACC CTGACCCCTC AATGCATAGC GCCGGTGTAC CTCTGCAGCC ACGGAGCTTC TTCTCGTCGC TTGCTCATGC ATTATCGGGG AGGCACGACA CTGCGGCCAA CAGGGGGTTA GATGGTGTGC CAATCAACCG GCTGCGCTAC TGGTTTGAGA ACGAGCAGTT GCCACCGGGT TGGGAGCCGT ATCATACTAC CACTCTCTTC GACACAGTCA CCTCAATGAG CCGACTCCAG AGGGCAATGG CTAGAGCTCA GAAGGGGAAG GGGAATGCAT CAAGGGGTAA AGCTGATTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA