Entry information : VdaCIIAA01
Entry ID 6809
Creation 2009-05-22 (Christophe Dunand)
Last sequence changes 2017-05-18 (Catherine Mathe)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-05-18 (Catherine Mathe)
Peroxidase information: VdaCIIAA01
Name VdaCIIAA01
Class Asco Class II type A    [Orthogroup: CIIAA001]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Verticillium
Organism Verticillium dahliae    [TaxId: 27337 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VdaCIIAA01
start..stop
S start..stop
VaaCIIAA01 858 0 1..419 1..419
CfioCIIAA01_MH18 588 0 1..404 1..405
CfioCIIAA01_PJ7 587 0 1..404 1..405
CgloCIIAA03_ST23 584 0 1..404 1..403
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 68824..70083 1260  
join(68824..70083)


exon

Literature and cross-references VdaCIIAA01
DNA ref. JGI genome:   Supercontig_1.38 (68824..70083)
Protein sequence: VdaCIIAA01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   419 (398)
PWM (Da):   %s   45218.71 (43075.5)  
PI (pH):   %s   7.84 (7.83) Peptide Signal:   %s   cut: 22 range:22-419
Sequence
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Send to Peroxiscan
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MHLPTILTTT VALASVPGVL GHPGMGKALG EIMSRQADEG DSTELLGDLV TLKDKDLTNV GKDIKKLLTG KGNPESNEKY TKVPPKNSAA CKADTCCIWS YIAKDMYGFM AGQSGRCTKW  ARFAVRMGFH DAAGWSKSTA SEGNGADGSI ILSNSELDRS ENNGLQEMGA RFQQMYDNYR GQGWDIGMAD LIQMGANVAT VTCPLGPRIK TYVGRKDSAT PAPENLLPDV NADADSLIAL  FRDKTIGPHG LVALVGAHTT SQQMFVNESR AGDPQDSTPG VWDVKFYPET TGKAPARVFR FPSDIKLSQH PTTKKEWKEF SGGGGQNHWN EDYAREYIRL SLLGVNNINK LTECTKVLPP 
TTKKFSPSDQ RKVEKWLNNT DRKGKAAKIA ENLLAGDLVV DDVPATASPT APATVTPAA* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron)
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATCTTC CCACCATCTT GACAACAACA GTAGCCCTGG CCTCTGTGCC GGGCGTGCTT GGACACCCAG GCATGGGCAA AGCCCTCGGC GAGATCATGT CACGACAGGC AGATGAGGGC  GACTCAACAG AGCTCCTCGG CGACCTTGTC ACTCTGAAGG ACAAAGATCT CACAAATGTC GGCAAGGATA TCAAGAAGCT GCTCACCGGC AAGGGCAATC CCGAGTCCAA TGAAAAGTAC  ACAAAGGTTC CCCCTAAGAA CTCGGCGGCG TGCAAGGCGG ACACTTGCTG CATTTGGAGC TACATCGCCA AAGATATGTA TGGCTTCATG GCCGGCCAGT CGGGTCGTTG CACAAAGTGG  GCACGTTTCG CCGTCCGCAT GGGATTCCAC GATGCCGCCG GCTGGTCCAA GTCTACAGCC AGCGAAGGCA ATGGCGCAGA CGGCAGTATC ATTCTCAGCA ACAGCGAGCT GGATCGCTCC  GAGAACAATG GTCTGCAGGA GATGGGCGCT CGCTTCCAAC AAATGTACGA CAACTACCGA GGGCAGGGTT GGGACATTGG CATGGCCGAC CTCATCCAGA TGGGCGCCAA CGTTGCCACC  GTGACATGCC CTCTTGGCCC CCGCATCAAG ACCTATGTTG GCCGCAAGGA CAGCGCCACG CCCGCTCCCG AAAACCTCCT CCCAGACGTC AATGCGGATG CCGACAGCCT GATCGCGCTG  TTCCGTGACA AGACCATCGG CCCGCACGGC CTCGTCGCCC TTGTCGGCGC GCACACGACG AGCCAGCAGA TGTTCGTAAA CGAATCCCGC GCCGGTGACC CTCAGGACAG CACACCCGGC  GTTTGGGATG TCAAGTTCTA CCCCGAGACT ACGGGCAAGG CACCAGCGCG TGTGTTCCGC TTCCCCAGTG ATATCAAGCT GTCGCAACAC CCTACAACGA AGAAGGAGTG GAAGGAGTTC  TCCGGTGGCG GCGGACAGAA CCACTGGAAC GAAGACTACG CCCGCGAATA CATCCGACTG TCTCTCCTCG GCGTCAACAA CATCAACAAG CTGACCGAAT GCACCAAAGT CCTGCCGCCC  ACCACCAAGA AGTTCTCGCC CTCTGATCAG CGCAAGGTCG AGAAGTGGCT CAACAACACT GATCGCAAGG GCAAGGCGGC CAAGATCGCG GAGAACCTGC TGGCGGGCGA CCTTGTCGTC 
GACGACGTTC CTGCCACGGC GAGTCCCACG GCACCTGCTA CCGTGACGCC GGCGGCTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATCTTC CCACCATCTT GACAACAACA GTAGCCCTGG CCTCTGTGCC GGGCGTGCTT GGACACCCAG GCATGGGCAA AGCCCTCGGC GAGATCATGT CACGACAGGC AGATGAGGGC  GACTCAACAG AGCTCCTCGG CGACCTTGTC ACTCTGAAGG ACAAAGATCT CACAAATGTC GGCAAGGATA TCAAGAAGCT GCTCACCGGC AAGGGCAATC CCGAGTCCAA TGAAAAGTAC  ACAAAGGTTC CCCCTAAGAA CTCGGCGGCG TGCAAGGCGG ACACTTGCTG CATTTGGAGC TACATCGCCA AAGATATGTA TGGCTTCATG GCCGGCCAGT CGGGTCGTTG CACAAAGTGG  GCACGTTTCG CCGTCCGCAT GGGATTCCAC GATGCCGCCG GCTGGTCCAA GTCTACAGCC AGCGAAGGCA ATGGCGCAGA CGGCAGTATC ATTCTCAGCA ACAGCGAGCT GGATCGCTCC  GAGAACAATG GTCTGCAGGA GATGGGCGCT CGCTTCCAAC AAATGTACGA CAACTACCGA GGGCAGGGTT GGGACATTGG CATGGCCGAC CTCATCCAGA TGGGCGCCAA CGTTGCCACC  GTGACATGCC CTCTTGGCCC CCGCATCAAG ACCTATGTTG GCCGCAAGGA CAGCGCCACG CCCGCTCCCG AAAACCTCCT CCCAGACGTC AATGCGGATG CCGACAGCCT GATCGCGCTG  TTCCGTGACA AGACCATCGG CCCGCACGGC CTCGTCGCCC TTGTCGGCGC GCACACGACG AGCCAGCAGA TGTTCGTAAA CGAATCCCGC GCCGGTGACC CTCAGGACAG CACACCCGGC  GTTTGGGATG TCAAGTTCTA CCCCGAGACT ACGGGCAAGG CACCAGCGCG TGTGTTCCGC TTCCCCAGTG ATATCAAGCT GTCGCAACAC CCTACAACGA AGAAGGAGTG GAAGGAGTTC  TCCGGTGGCG GCGGACAGAA CCACTGGAAC GAAGACTACG CCCGCGAATA CATCCGACTG TCTCTCCTCG GCGTCAACAA CATCAACAAG CTGACCGAAT GCACCAAAGT CCTGCCGCCC  ACCACCAAGA AGTTCTCGCC CTCTGATCAG CGCAAGGTCG AGAAGTGGCT CAACAACACT GATCGCAAGG GCAAGGCGGC CAAGATCGCG GAGAACCTGC TGGCGGGCGA CCTTGTCGTC 
GACGACGTTC CTGCCACGGC GAGTCCCACG GCACCTGCTA CCGTGACGCC GGCGGCTTGA 

Retrieve as FASTA