Entry information : VaaCIIAA01
Entry ID 6810
Creation 2009-05-22 (Christophe Dunand)
Last sequence changes 2017-05-18 (Catherine Mathe)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-05-18 (Catherine Mathe)
Peroxidase information: VaaCIIAA01
Name VaaCIIAA01
Class Asco Class II type A    [Orthogroup: CIIAA001]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Verticillium
Organism Verticillium albo-atrum    [TaxId: 27335 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VaaCIIAA01
start..stop
S start..stop
VdaCIIAA01 858 0 1..419 1..419
CfioCIIAA01_MH18 593 0 1..404 1..405
CfioCIIAA01_PJ7 592 0 1..404 1..405
CgloCIIAA03_ST23 585 0 1..404 1..403
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 8353..9612 1260  
join(8353..9612)


exon

Literature and cross-references VaaCIIAA01
DNA ref. GenBank:   ABPE01004132.1 (8353..9612)
Protein sequence: VaaCIIAA01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   419 (398)
PWM (Da):   %s   45191.74 (43058.6)  
PI (pH):   %s   8.35 (8.34) Peptide Signal:   %s   cut: 22 range:22-419
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHLSTILTTT VALASVPGVL GHPGMGKALG EIMSRQADEG DSTELLGDLV TLKDKDLTNV GKDIKKLLTG KGNPESNEKY TKVPPKNSAA CKADTCCIWS YIAKDMYGFM AGQSGRCTKW  ARFAVRMGFH DAAGWSKSTA SQGNGADGSI ILSKSELDRS ENNGLQEMGA RFQQMYDNYR GQGWDIGMAD LIQMGANVAT VTCPLGPRIK TYVGRKDSAT PAPDNLLPDV NADADSLIAL  FRDKTIGPHG LVALVGAHTT SQQMFVNESR AGDPQDSTPG VWDVKFYPET TGKAPARVFR FPSDIKLSQH PTTKKEWKEF SGGGGQNHWN EDYAREYIRL SLLGVNNINK LTECTKVLPP 
TTKKFSPSDQ RKVEKWLNNT DRKGKAAKIA ENLLAGDLVV DEVPATASPT APAAVTPAA* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). No EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATCTTT CTACCATCTT GACAACAACA GTAGCCCTGG CCTCTGTGCC GGGCGTGCTC GGACACCCGG GCATGGGTAA AGCCCTCGGC GAGATCATGT CACGACAGGC AGATGAGGGC  GACTCAACAG AGCTTCTCGG CGACCTTGTC ACTCTCAAGG ACAAAGATCT CACAAATGTT GGCAAGGATA TCAAGAAGTT GCTCACCGGC AAGGGCAATC CTGAGTCCAA TGAAAAATAC  ACAAAGGTTC CCCCCAAGAA CTCGGCAGCG TGCAAGGCGG ACACTTGCTG CATTTGGAGC TACATCGCCA AAGACATGTA TGGCTTCATG GCTGGCCAGT CGGGTCGCTG TACAAAGTGG  GCCCGTTTTG CCGTCCGCAT GGGATTCCAC GACGCCGCCG GCTGGTCCAA GTCTACAGCC AGCCAAGGCA ATGGCGCAGA CGGCAGTATC ATTCTCAGCA AGAGCGAGCT GGATCGCTCC  GAGAACAATG GTCTGCAGGA GATGGGCGCT CGCTTCCAAC AAATGTATGA CAACTACCGA GGGCAGGGTT GGGACATTGG CATGGCCGAC CTCATTCAGA TGGGCGCCAA TGTTGCCACC  GTGACATGCC CTCTTGGCCC CCGCATCAAG ACCTATGTTG GCCGCAAGGA CAGCGCCACG CCCGCTCCCG ACAACCTCCT GCCAGACGTT AATGCGGATG CCGACAGCCT GATCGCGCTG  TTCCGTGACA AGACTATCGG CCCGCACGGC CTCGTCGCCC TTGTCGGCGC ACACACGACG AGCCAGCAGA TGTTCGTGAA CGAGTCCCGC GCTGGTGACC CTCAGGACAG CACACCCGGC  GTTTGGGACG TTAAGTTCTA CCCTGAGACG ACGGGCAAGG CACCAGCGCG TGTATTCCGC TTCCCCAGCG ATATTAAGCT GTCGCAACAC CCTACAACGA AGAAGGAGTG GAAGGAGTTC  TCTGGTGGCG GCGGACAAAA CCACTGGAAC GAAGACTACG CCCGCGAATA CATCCGACTG TCTCTCCTCG GTGTCAACAA CATCAACAAG CTGACCGAAT GCACCAAAGT CCTGCCGCCC  ACCACCAAGA AGTTCTCGCC CTCTGATCAG CGCAAGGTCG AGAAGTGGCT CAACAACACT GATCGCAAGG GCAAGGCGGC CAAGATTGCG GAGAACCTGC TGGCGGGCGA CCTTGTCGTG 
GACGAGGTTC CTGCCACAGC GAGCCCCACG GCACCTGCTG CCGTGACGCC GGCGGCTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATCTTT CTACCATCTT GACAACAACA GTAGCCCTGG CCTCTGTGCC GGGCGTGCTC GGACACCCGG GCATGGGTAA AGCCCTCGGC GAGATCATGT CACGACAGGC AGATGAGGGC  GACTCAACAG AGCTTCTCGG CGACCTTGTC ACTCTCAAGG ACAAAGATCT CACAAATGTT GGCAAGGATA TCAAGAAGTT GCTCACCGGC AAGGGCAATC CTGAGTCCAA TGAAAAATAC  ACAAAGGTTC CCCCCAAGAA CTCGGCAGCG TGCAAGGCGG ACACTTGCTG CATTTGGAGC TACATCGCCA AAGACATGTA TGGCTTCATG GCTGGCCAGT CGGGTCGCTG TACAAAGTGG  GCCCGTTTTG CCGTCCGCAT GGGATTCCAC GACGCCGCCG GCTGGTCCAA GTCTACAGCC AGCCAAGGCA ATGGCGCAGA CGGCAGTATC ATTCTCAGCA AGAGCGAGCT GGATCGCTCC  GAGAACAATG GTCTGCAGGA GATGGGCGCT CGCTTCCAAC AAATGTATGA CAACTACCGA GGGCAGGGTT GGGACATTGG CATGGCCGAC CTCATTCAGA TGGGCGCCAA TGTTGCCACC  GTGACATGCC CTCTTGGCCC CCGCATCAAG ACCTATGTTG GCCGCAAGGA CAGCGCCACG CCCGCTCCCG ACAACCTCCT GCCAGACGTT AATGCGGATG CCGACAGCCT GATCGCGCTG  TTCCGTGACA AGACTATCGG CCCGCACGGC CTCGTCGCCC TTGTCGGCGC ACACACGACG AGCCAGCAGA TGTTCGTGAA CGAGTCCCGC GCTGGTGACC CTCAGGACAG CACACCCGGC  GTTTGGGACG TTAAGTTCTA CCCTGAGACG ACGGGCAAGG CACCAGCGCG TGTATTCCGC TTCCCCAGCG ATATTAAGCT GTCGCAACAC CCTACAACGA AGAAGGAGTG GAAGGAGTTC  TCTGGTGGCG GCGGACAAAA CCACTGGAAC GAAGACTACG CCCGCGAATA CATCCGACTG TCTCTCCTCG GTGTCAACAA CATCAACAAG CTGACCGAAT GCACCAAAGT CCTGCCGCCC  ACCACCAAGA AGTTCTCGCC CTCTGATCAG CGCAAGGTCG AGAAGTGGCT CAACAACACT GATCGCAAGG GCAAGGCGGC CAAGATTGCG GAGAACCTGC TGGCGGGCGA CCTTGTCGTG 
GACGAGGTTC CTGCCACAGC GAGCCCCACG GCACCTGCTG CCGTGACGCC GGCGGCTTGA 

Retrieve as FASTA