Entry information : VdaCIIAA02
Entry ID 6813
Creation 2009-05-25 (Christophe Dunand)
Last sequence changes 2015-04-28 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2017-05-04 (Catherine Mathe)
Peroxidase information: VdaCIIAA02
Name VdaCIIAA02
Class Asco Class II type A    [Orthogroup: CIIAA001]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Verticillium
Organism Verticillium dahliae    [TaxId: 27337 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VdaCIIAA02
start..stop
S start..stop
VaaCIIAA02 801 0 1..399 1..399
AalcCIIAA 491 1e-174 5..399 6..394
CfioCIIAA03_MH18 431 7e-151 1..398 1..401
CfioCIIAA03_PJ7 430 2e-150 1..398 1..401
Literature and cross-references VdaCIIAA02
DNA ref. GenBank:   ABJE01000162.1 (8098..9360)
Cluster/Prediction ref. JGI gene:   782
Protein sequence: VdaCIIAA02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   399 (382)
PWM (Da):   %s   43342.78 (41639.8)  
PI (pH):   %s   9.04 (8.88) Peptide Signal:   %s   cut: 18 range:18-399
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKFSIVLVAL TAGTSIAHPG MSKAMADIQE IQARDGRSGP STEMIGDLVD LDDRRLTATG RDIKNILSGR GIPQNTVASY WLGAPRLGGL LCRMDQCCVW KHIANEMRGM MVGDAGRCNN  LARTSIRLGF HDAATWSKDT GGTGADGSIV LTAKCARVPE NNGLAEVCAQ MKTWHDKERG YGVSMADLIQ FAANVATVSC PLGPRIKTYI GRKDNAVEPP RNLLPSPFHS ADRLLQLFAD  KTFTADGLIA LMGAHSTSQQ RFVNRTRPGD PKDSTPGVWD VKYYGETIDA NAPQRVFKFQ SDVNLANDAR TRAAWESFIP ESSQGAWNHA YAAEYVRMSL LGVYNINSLT DCTKALPPFQ 
RSYSSSDKSV IDRFMHGLIG SAQKVKNLLL KGDKVPSNV 

Retrieve as FASTA  
Remarks Complete sequence from genomic (1 introns). Frame shift in the sequence. No ESTs. Incorrect prediction from JGI (two extra introns and 1 missing intron).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGTTCT CCATCGTACT GGTTGCCTTG ACGGCTGGTA CCTCCATTGC TCATCCGGGT ATGAGCAAGG CAATGGCTGA TATACAAGAG ATTCAAGCAC GAGATGGGCG CTCCGGACCC  TCGACCGAGA TGATCGGCGA CCTGGTGGAT CTTGATGACA GGCGGCTGAC TGCCACCGGC CGAGATATCA AGAACATCCT AAGCGGCCGC GGTATCCCCC AAAATACTGT GGCTAGCTAC  TGGCTGGGTG CCCCTCGTCT TGGGGGCCTC TTATGCCGCA TGGACCAGTG TTGTGTGTGG AAACACATTG CCAACGAGAT GCGCGGCATG ATGGTCGGAG ATGCAGGTCG GTGCAACAAT  CTTGCACGTA CCTCCATCCG TCTTGGCTTC CACGACGCCG CCACCTGGTC CAAGGACACC GGAGGCACCG GTGCCGACGG GTCGATCGTC CTGACGGCCA AGTGTGCCCG CGTTCCCGAA  AATAACGGCC TTGCTGAGGT TTGCGCTCAA ATGAAGACGT GGCACGACAA GGAAAGGGCT ACGGCGTCTC CATGGCCGAC CTCATCCAGT TCGCCGCCAA TGTAGCCACC GTGTCGTGCC  CGCCTCGGCC CGCGTATCAA GACTTATATC GGCCGTAAGG ACAACGCCGT CGAACCCCCG CGCAACCTCC TTCCTAGCCC TTTCCACAGC GCAGACCGCC TGCTCCAGCT CTTCGCCGAC  AAGACCTTTA CAGCGGATGG CCTCATCGCT CTCATGGGCG CCCACTCCAC GAGCCAGCAG CGTTTCGTCA ACCGTACCCG CCCCGGTGAT CCCAAGGACT CCACGCCTGG CGTGTGGGAC  GTCAAGTACT ACGGCGAGAC CATCGATGCC AACGCACCCC AGCGTGTTTT CAAGTTTCAG AGCGACGTCA ACCTAGCCAA CGACGCACGC ACACGCGCTG CCTGGGAGTC GTTCATCCCC  GAGTCATCCC AGGGCGCCTG GAACCATGTA CGTCGTTTCG TGCCCGCCTA CCTGTCGTTC GATGCTTTTA CCCGTACTGA CCCGAGACAG GCTTACGCTG CCGAGTATGT CCGCATGTCG  CTCCTTGGCG TGTACAACAT CAACAGCCTC ACCGATTGCA CCAAGGCGCT CCCTCCGTTC CAGCGCAGCT ACAGCTCGTC GGACAAATCT GTCATCGACC GCTTCATGCA CGGACTGATT 
GGGAGCGCGC AAAAAGTCAA GAACCTTCTG CTGAAAGGAG ACAAGGTTCC CAGCAATGTC TAG 

Retrieve as FASTA