Entry information : CheCIIAB01_C4
Entry ID 6816
Creation 2009-05-20 (Christophe Dunand)
Last sequence changes 2009-05-20 (Christophe Dunand)
Sequence status complete
Reviewer Nizar Fawal
Last annotation changes 2013-02-14 (Nizar Fawal)
Peroxidase information: CheCIIAB01_C4
Name CheCIIAB01_C4
Class Asco Class II type B    [Orthogroup: CIIAB001]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Pleosporaceae Cochliobolus
Organism Cochliobolus heterostrophus    [TaxId: 5016 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CheCIIAB01_C4
start..stop
S start..stop
CheCIIAB01_C5 677 0 1..329 1..329
COsaCIIAB01 630 0 1..329 1..329
ClunCIIAB03 476 8.11e-171 1..327 1..331
AbraCIIAB01 426 6.27e-151 1..329 1..327
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6816' 'join(692454..693042,693113..693513)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 692454..693042 587 N° 2 693113..693513 399  
join(692454..693042,693113..693513)


exon

Literature and cross-references CheCIIAB01_C4
Literature Lucas,S., Rokhsar,D., Wang,M., Lindquist,E.A., Baker,S., Liu,J. and Turgeon,G. DOE Joint Genome Institute Cochliobolus heterostrophus EST project
DNA ref. JGI genome:   scaffold_8 (692454..693513)
mRNA ref. JGI transcript:   10004
EST ref. GenBank:   FK677136.1 [5' end]  FK695126.1 [3' end]
Protein sequence: CheCIIAB01_C4
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (310)
PWM (Da):   %s   35126.56 (33139.5)  
PI (pH):   %s   8.2 (7.98) Peptide Signal:   %s   cut: 20 range:20-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MYIRNILVSGLVAASTVQAYNNDTFGEDEKWIVADPAPVQKRQLI
NVFGLISSFFGGGNQQDSSQCPAIWTQISATLTQQFSANGECTDAARAAIRAAFHDCFPGACDGSLILANECAQA
PSRALQGFCSNLAGVASQTNVGVGDLIQFAAAHAIKTCPEG
PTVPVRIGRQDSSRENDWRILPRGDARGNDIVRLF
SSKGFSPVDLAALLGAHSTAKQQFFDPSQAGAALDSTPGVWDIKYYTETLRGNAPFTLPADRNVARNPATALAFARFGVDKKAWDDAF
VVAMVKMGMMGVTNRNMIDCTSALPKTSASKREVKEKRVSGRFTW

Retrieve as FASTA  
Remarks Complete sequence from genomic (1 intron) and 4 ESTs. Strain="C5".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTATATTCGCAACATTCTGGTCTCTGGCCTAGTGGCTGCCAGTACAGTGCAAGCCTACAACAATGACACATTTGGCGAAGATGAAAAGTGGATAGTAGCAGATCCAGCTCCAGTACAA
AAGCGACAACTCATCAACGTCTTCGGCCTCATCAGCAGCTTCTTCGGCGGCGGCAACCAACAAGATTCAAGCCAGTGCCCTGCCATCTGGACCCAAATATCTGCCACTCTTACCCAACAA
TTCTCCGCAAACGGCGAATGCACAGATGCCGCCCGGGCCGCCATCCGAGCTGCTTTCCACGACTGCTTCCCAGGAGCCTGTGACGGCTCTCTCATCCTAGCCAACGAATGCGCACAAGCC
CCAAGCCGCGCTCTCCAGGGCTTCTGCAGTAACCTGGCAGGCGTAGCCTCGCAAACCAACGTCGGCGTCGGCGATCTCATCCAATTCGCAGCCGCACACGCCATCAAGACATGTCCTGAA
GGTCCCACCGTTCCTGTGCGAATCGGACGACAAGACTCTAGCCGCGAAAACGACTGGAGAATACTACCACGAGGTGATGCCAGAGGAAACGATATCGTCAGGTTGTTCT
CTGTAAGTTTC
CCTCCAAACAGTTCTTTTTTTTTTTCCTAAAAAAACACTCTTCTAACAAAACATATAACAGCCTCAAAAGGCTTCTCCCCCGTCGACCTCGCCGCCCTCCTCGGCGCTCACTCAACCGCC
AAACAGCAATTCTTCGATCCCTCCCAAGCCGGCGCCGCTCTCGACTCCACCCCAGGTGTCTGGGACATCAAGTACTACACAGAGACTCTGCGGGGAAACGCGCCTTTTACTCTCCCCGCT
GATAGGAACGTTGCGAGGAATCCGGCGACGGCGCTGGCTTTTGCGCGGTTTGGGGTGGATAAGAAGGCGTGGGATGACGCGTTTGTTGTGGCTATGGTCAAGATGGGCATGATGGGTGTG
ACGAATCGGAATATGATTGATTGTACGAGTGCGTTGCCCAAGACAAGTGCTTCGAAGAGGGAGGTTAAGGAGAAGAGGGTTTCGGGGAGGTTTACGTGGTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTATATTCGCAACATTCTGGTCTCTGGCCTAGTGGCTGCCAGTACAGTGCAAGCCTACAACAATGACACATTTGGCGAAGATGAAAAGTGGATAGTAGCAGATCCAGCTCCAGTACAA
AAGCGACAACTCATCAACGTCTTCGGCCTCATCAGCAGCTTCTTCGGCGGCGGCAACCAACAAGATTCAAGCCAGTGCCCTGCCATCTGGACCCAAATATCTGCCACTCTTACCCAACAA
TTCTCCGCAAACGGCGAATGCACAGATGCCGCCCGGGCCGCCATCCGAGCTGCTTTCCACGACTGCTTCCCAGGAGCCTGTGACGGCTCTCTCATCCTAGCCAACGAATGCGCACAAGCC
CCAAGCCGCGCTCTCCAGGGCTTCTGCAGTAACCTGGCAGGCGTAGCCTCGCAAACCAACGTCGGCGTCGGCGATCTCATCCAATTCGCAGCCGCACACGCCATCAAGACATGTCCTGAA
GGTCCCACCGTTCCTGTGCGAATCGGACGACAAGACTCTAGCCGCGAAAACGACTGGAGAATACTACCACGAGGTGATGCCAGAGGAAACGATATCGTCAGGTTGTTCT
CCTCAAAAGGC
TTCTCCCCCGTCGACCTCGCCGCCCTCCTCGGCGCTCACTCAACCGCCAAACAGCAATTCTTCGATCCCTCCCAAGCCGGCGCCGCTCTCGACTCCACCCCAGGTGTCTGGGACATCAAG
TACTACACAGAGACTCTGCGGGGAAACGCGCCTTTTACTCTCCCCGCTGATAGGAACGTTGCGAGGAATCCGGCGACGGCGCTGGCTTTTGCGCGGTTTGGGGTGGATAAGAAGGCGTGG
GATGACGCGTTTGTTGTGGCTATGGTCAAGATGGGCATGATGGGTGTGACGAATCGGAATATGATTGATTGTACGAGTGCGTTGCCCAAGACAAGTGCTTCGAAGAGGGAGGTTAAGGAG
AAGAGGGTTTCGGGGAGGTTTACGTGGTAA

Retrieve as FASTA