Entry information : CparCIIAB01
| Entry ID | 6821 |
|---|---|
| Creation | 2009-05-20 (Christophe Dunand) |
| Last sequence changes | 2011-10-17 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Christophe Dunand |
| Last annotation changes | 2013-11-29 (Christophe Dunand) |
Peroxidase information: CparCIIAB01
| Name | CparCIIAB01 | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Asco Class II type B [Orthogroup: CIIAB001] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Fungi Ascomycota Sordariomycetes Cryphonectriaceae Cryphonectria | ||||||||||||||||||||||||||||||||||||
| Organism | Cryphonectria parasitica [TaxId: 5116 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
||||||||||||||||||||||||||||||||||||
| Tissue type | N/D |
||||||||||||||||||||||||||||||||||||
| Inducer | N/D |
||||||||||||||||||||||||||||||||||||
| Repressor | N/D |
||||||||||||||||||||||||||||||||||||
| Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||
| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6821' 'join(657221..657629,657723..658083,658221..658332)' |
Exons►
|
||||||||||||||||||||||||||||||||||||
Literature and cross-references CparCIIAB01
| DNA ref. | JGI genome: scaffold_5 (657221..658332) |
|---|
Protein sequence: CparCIIAB01
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Complete sequence from genomic (2 introns). Position of intron 2 is suspicious: conserved W is missing between LYARD and HMIKMI (Q*AWDVAY is found in frame with LYARD!!!). No EST. Incorrect prediction from JGI (last exon is missing). | ||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
| CDS► Send to BLAST |
|
||||||||||||
