1. Browse the Database
  2. View Redoxidase
Entry information : PoDyPrx03_PC15
Entry ID 6849
Creation 2009-06-19 (Christophe Dunand)
Last sequence changes 2011-11-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: PoDyPrx03_PC15
Name PoDyPrx03_PC15
Class DyP-type peroxidase D    [Orthogroup: DyPrxD001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Pleurotaceae Pleurotus
Organism Pleurotus ostreatus (Oyster mushroom)    [TaxId: 5322 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PoDyPrx03_PC15
start..stop		 S start..stop
PoDyPrx02_PC15 722 0 5..479 36..511
PoDyPrx01_other 634 0 6..479 51..525
PoDyPrx01_PC15 634 0 4..479 40..516
PstrDyPrx01 460 2.15e-159 6..479 44..505
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6849' 'complement(join(3196067..3196265,3196324..3196390,3196446..3196502,3196554..3196782,3196833..3196917,3196978..3197174,3197235..3197608,3197659..3197762,3197823..3197925,3198015..3198039))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3198015..3198039 23 N° 2 3197823..3197925 101 N° 3 3197659..3197762 102 N° 4 3197235..3197608 372
N° 5 3196978..3197174 195 N° 6 3196833..3196917 83 N° 7 3196554..3196782 227 N° 8 3196446..3196502 55
N° 9 3196324..3196390 65 N° 10 3196067..3196265 197  
complement(join(3196067..3196265,3196324..3196390,3196446..3196502,3196554..3196 782,3196833..3196917,3196978..3197174,3197235..3197608,3197659..3197762,3197823. .3197925,3198015..3198039))


exon

Literature and cross-references PoDyPrx03_PC15
DNA ref. JGI genome:   scaffold_07 (3198039..3196067)
mRNA ref. JGI transcript:   52170
Protein sequence: PoDyPrx03_PC15
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   479
PWM (Da):   %s   52877.84  
PI (pH):   %s   7.47
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLWGTLSVDYPGQGGLPSLEVIQSLNVTNGTFMPLHQIQGDILIGMKKPKELFFFYTIKDTRRFKQVLAKDIYPHITTAQLICGTCPQTSALLNVAWTSKGLKKLNVHGDTLDKFFNMGQ
AADASALGDNDPPTNWVPALLKDRTHGAFLIASNDWAPVDALLARIIGFLGTSIVEVHRLKGAHRPGAFAGHEHFGYLDGSQPAIGGFATSILPGQSLVLPGTILTGELGDPLALTRPSW
MKWGSFMAFRQLQQFVPEFDEHLLQMASAIPDETRTKQERAELLGARMFGRWKGTPLDLAPDHDVPAIGSNSRRNNDFDYNHPPPFNIFANQSRCPFSSHIRKARPRADQANLNIFNQIM
RAGLPYGDEVTDAEREKKTTTLERGFAFVSYQSDIGLGFRFQQVVWANNIHFPFLKDKTPGYDPIIGQNGANPVFSSGIDYKHPDQNSTYMSFILSRGGEYLYSPSMSAILDPIAA

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTTTGGGGCACTTTGAGCGTCGGTCTAGCGTCTCTCGTTCCTTACGCCTTGGGATTTTTACACGGCAAGTCAAGGCCCTTTCCCCGAAGGTCGGATGCTCATCTTCCCTAGACACTA
TCCCGGCCAAGGCGGGTTGCCTTCACTGGAAGTCATACAGTCCCTGAATGTCACCAATGGAACATTCATGCCGCTGCATCAGATTCAAGGAGACATCTTGTAAGCCTTTCGTGCTTCTTC
GTGGAGCTCGTAAGATATAAGAACTCACCCCGATCGAAGAAAATTGGTATGAAGAAACCGAAGGAGCTCTTCTTTTTCTACACAATCAAAGACACCCGAAGGTTCAAGCAAGTCCTTGCG
AAAGATATTTACCCGCATATTACCAGTAAACCCCTTGTTTATCCCACTTTTGCATGGTTCTGACCCTTTGTTTAGCACAACTGCGCAGCTTATCTGCGGTACTTGCCCACAAACAAGCGC
GTTACTGAACGTGGCATGGACATCCAAGGGCCTCAAAAAGCTCAATGTCCACGGAGATACTCTCGACAAATTCTTCAACATGGGTCAAGCCGCGGACGCTTCCGCCCTTGGTGACAACGA
CCCTCCCACAAACTGGGTTCCCGCCCTTTTGAAGGACCGAACCCATGGCGCATTCCTCATCGCCTCCAACGACTGGGCACCTGTCGACGCCTTGCTTGCTCGAATTATAGGTTTTCTGGG
CACCTCAATCGTGGAAGTCCACAGACTCAAGGGCGCACATCGACCGGGTGCGTTTGCTGGCCACGAACACTTCGGATACCTCGATGGCATTGTACGTGGTTTAATCGTGGGCCTTGTCCC
GATTGACTAACCGATTCGCATTCGAACTCAGTCTCCCAGCCAGCTATTGGCGGATTTGCTACTAGCATCCTCCCTGGGCAATCCCTCGTTTTGCCTGGGACTATTCTGACTGGCGAGTTA
GGCGACCCTCTTGCACTTACTCGGCCTTCGTGGATGAAATGGGGTTCATTCATGGCATTTCGACAACTACAGCAATTCGTCCCTGAGTTCGATGAGCACCTTCTTCAGATGTATGTCTGC
TTTATCCACTCGCAATTTGAGGCTACTGACTTGGATCATCATCACTACAGGGGGCATCGGCTATACCAGACGAAACAAGGACCAAGCAAGAACGCGCCGAGCTTCTTGGTGCCCGAATGT
TCGGCCGCTGGAAGAGTGTTCGTTACGTTCATGTGCTTATGGAACGGCTACTTACCTTGATACATAGGGGGGACGCCTCTCGACCTTGCCCCCGATCACGACGTCCCCGCCATTGGCTCC
AATTCTCGCCGCAACAATGACTTTGACTATAACCACCCACCGCCATTCAATATCTTTGCTAACCAATCGCGCTGCCCCTTCTCTTCGCACATCCGCAAAGCCCGACCCCGTGCGGACCAG
GCTAACCTCAACATCTTCAACCAGATAATGCGGGCAGGTCTTCCTTACGGCGATGAAGGTATGGGATTGGATCATGGGCTACGTTTGTGAAACTCATTTCTCTCTGTAGTCTCACTGATG
CGGAGCGGGAAAAGAAGACAACCACGCTTGAACGCGGATTCGCATTTGGTGCGTAGCCTGCTCGTTTGTGAATGGAACGGTTGCCTTCTGACAATGGCCCTAGTATATCCTATCAGAGCG
ATATAGGCCTTGGGTTCCGCTTTCAACAGGTTGTCTGGGCCAACAACATTCAGTACGCTTGTTCTAGATTATCCCCTCCAACGCGAGATTTGCTCACATATCGACTCTAGCTCTTCCCCT
TCCTCAAGGATAAGACTCCCGGATACGACCCCATCATCGGCCAGAACGGCGCGAACCCCGTCTTCTCCTCTGGAATTGACTACAAGCACCCCGATCAGAATTCCACTTACATGAGCTTCA
TCCTCTCCCGAGGGGGAGAATACCTCTACAGCCCTTCGATGTCTGCTATCCTCGACCCAATTGCGGCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTTTGGGGCACTTTGAGCGTCGACTATCCCGGCCAAGGCGGGTTGCCTTCACTGGAAGTCATACAGTCCCTGAATGTCACCAATGGAACATTCATGCCGCTGCATCAGATTCAAGGA
GACATCTTAATTGGTATGAAGAAACCGAAGGAGCTCTTCTTTTTCTACACAATCAAAGACACCCGAAGGTTCAAGCAAGTCCTTGCGAAAGATATTTACCCGCATATTACCACAACTGCG
CAGCTTATCTGCGGTACTTGCCCACAAACAAGCGCGTTACTGAACGTGGCATGGACATCCAAGGGCCTCAAAAAGCTCAATGTCCACGGAGATACTCTCGACAAATTCTTCAACATGGGT
CAAGCCGCGGACGCTTCCGCCCTTGGTGACAACGACCCTCCCACAAACTGGGTTCCCGCCCTTTTGAAGGACCGAACCCATGGCGCATTCCTCATCGCCTCCAACGACTGGGCACCTGTC
GACGCCTTGCTTGCTCGAATTATAGGTTTTCTGGGCACCTCAATCGTGGAAGTCCACAGACTCAAGGGCGCACATCGACCGGGTGCGTTTGCTGGCCACGAACACTTCGGATACCTCGAT
GGCATTTCCCAGCCAGCTATTGGCGGATTTGCTACTAGCATCCTCCCTGGGCAATCCCTCGTTTTGCCTGGGACTATTCTGACTGGCGAGTTAGGCGACCCTCTTGCACTTACTCGGCCT
TCGTGGATGAAATGGGGTTCATTCATGGCATTTCGACAACTACAGCAATTCGTCCCTGAGTTCGATGAGCACCTTCTTCAGATGGCATCGGCTATACCAGACGAAACAAGGACCAAGCAA
GAACGCGCCGAGCTTCTTGGTGCCCGAATGTTCGGCCGCTGGAAGAGTGGGACGCCTCTCGACCTTGCCCCCGATCACGACGTCCCCGCCATTGGCTCCAATTCTCGCCGCAACAATGAC
TTTGACTATAACCACCCACCGCCATTCAATATCTTTGCTAACCAATCGCGCTGCCCCTTCTCTTCGCACATCCGCAAAGCCCGACCCCGTGCGGACCAGGCTAACCTCAACATCTTCAAC
CAGATAATGCGGGCAGGTCTTCCTTACGGCGATGAAGTCACTGATGCGGAGCGGGAAAAGAAGACAACCACGCTTGAACGCGGATTCGCATTTGTATCCTATCAGAGCGATATAGGCCTT
GGGTTCCGCTTTCAACAGGTTGTCTGGGCCAACAACATTCACTTCCCCTTCCTCAAGGATAAGACTCCCGGATACGACCCCATCATCGGCCAGAACGGCGCGAACCCCGTCTTCTCCTCT
GGAATTGACTACAAGCACCCCGATCAGAATTCCACTTACATGAGCTTCATCCTCTCCCGAGGGGGAGAATACCTCTACAGCCCTTCGATGTCTGCTATCCTCGACCCAATTGCGGCATAA

Retrieve as FASTA