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Entry information : BnPrx06-2_other
Entry ID 6860
Creation 2009-07-10 (Christophe Dunand)
Last sequence changes 2009-07-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2009-07-10 (Christophe Dunand)
Peroxidase information: BnPrx06-2_other
Name BnPrx06-2_other
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx06-2_other
start..stop		 S start..stop
BrPrx06-1Aa_other 362 3.1e-128 1..184 22..205
BoPrx06_other 362 4.21e-128 1..184 22..205
NoffPrx06-1A 343 9.84e-121 1..184 21..204
AlyPrx06 340 9.68e-120 1..184 21..204
Literature and cross-references BnPrx06-2_other
Literature Malik,M.R., Wang,F., Dirpaul,J.M., Zhou,N., Polowick,P.L., Ferrie ,A.M. and Krochko,J.E. Transcript profiling and identification of molecular markers for early microspore embryogenesis in Brassica napus. Plant Physiol. 144 (1), 134-154 (2007).
DNA ref. GenBank:   CU960958.1 [Fragment]
Protein sequence: BnPrx06-2_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   184 (735)
PWM (Da):   %s   19936.12 (78072.5)  
PI (pH):   %s   8.13 (7.29) Peptide Signal:   %s   cut: 18 range:18-752
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
DLSSDYYSKT CPDFDQTLVQ VVTDKQIAAP TTAAGTLRLF FHDCMVDGCD ASILVASTSG KTSERDADIN HSLPGDAFDL ITRIKTALEL KCPNIVSCSD ILVGATRSLV KMVGGPRINV 
KYGRKDSLDS YMNRVERKLA RPNMTMDHII SIFRSAGLTV SKKVALVGSH TIGFSHCKEF ASRI 

Retrieve as FASTA  
Remarks Partial sequence from 1 GSS (intron 1, no intron 2 and 3)