1. Browse the Database
  2. View Redoxidase
Entry information : AvePrx113-1A (Prx113-A)
Entry ID 6869
Creation 2009-07-13 (ester Simonetti)
Last sequence changes 2014-06-18 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-06-18 (Christophe Dunand)
Peroxidase information: AvePrx113-1A (Prx113-A)
Name (synonym) AvePrx113-1A (Prx113-A)
Class Class III peroxidase    [Orthogroup: Prx103]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Aegilops
Organism Aegilops ventricosa (Goatgrass) (Triticum ventricosum)    [TaxId: 116981 ]
Cellular localisation N/D
Tissue type Roots
Inducer Cyst nematode infection
Repressor N/D
Best BLASTp hits
Perox score E-value AvePrx113-1A
start..stop		 S start..stop
TmPrx01 628 0 1..312 1..312
TaPrx03-1A 613 0 1..312 1..312
TaPrx03-1B 608 0 1..312 1..312
HvPrx08 598 0 1..312 1..312
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6869' 'join(47..253,354..530,612..1166)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 47..253 205 N° 2 354..530 175 N° 3 612..1166 553  
join(47..253,354..530,612..1166)


exon

Literature and cross-references AvePrx113-1A (Prx113-A)
Literature Simonetti,E., Veronico,P., Melillo,M.T., Delibes,A., Andres,M.F. and Lopez-Brana,I. Analysis of Class III Peroxidase Genes Expressed in Roots of Resistant and Susceptible Wheat Lines Infected by Heterodera avenae. Mol. Plant Microbe Interact. 22 (9), 1081-1092 (2009).
DNA ref. GenBank:   EU595576.1
Protein sequence: AvePrx113-1A (Prx113-A)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   312 (290)
PWM (Da):   %s   32559.98 (30530.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.64 (5.64) Peptide Signal:   %s   cut: 23 range:23-312
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAASASCISLVVLVALATVASAQLSPTFYDTSCPRALATIKSGVM
AAVSTDPRMGASLLRLHFHDCFVQGCDASVLLSGMEQNALPNNGSLRGFGVIDSIKTQIEAICAQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANEAAANSDLPGPTSSRSDLELAFSNKGLNTVDMVALSGAHTIG
QAQCGTFKDRIYNETNIDTTFATSLRANCPRSNGDGSLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAAFSSAFTTAMIKMGNIAPKTGTQGQIRLSCSR
VNS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCCTCTGCTTCTTGCATTTCACTGGTGGTGCTCGTGGCTCTGGCCACGGTGGCGTCGGCGCAGCTGTCGCCGACGTTCTACGACACGTCGTGCCCCAGGGCCCTGGCCACCATC
AAGAGCGGCGTCATGGCCGCCGTGAGCACCGACCCTCGGATGGGCGCGTCGCTGCTCCGGCTGCACTTCCACGACTGCTTCGTCCAAAAGTAAGTTGGCCACATGCATGCATGCATATCC
CGATAGCCGTCACGTACCCTGTTTTGTATAGGTTTTGCTTGCTAAACACTATAAGCATGTGATGTGCAGGGCTGTGACGCGTCTGTTCTGCTTTCTGGCATGGAACAAAACGCTCTCCCG
AACAACGGGTCACTGCGGGGCTTCGGCGTCATCGACAGCATCAAGACACAGATCGAGGCCATCTGCGCCCAGACCGTCTCCTGCGCCGACATCCTCACCGTCGCTGCCCGTGACTCCGTT
GTCGCCCCGTAAGAATATCATCTTACGATCGTGTACATCATCGATTGGATGCCATCGTTAACCGTTTTCTTCGTATCCTTCGCGTGCAGCTCGGAGGGCCATCATGGACAGTCCCTCTGG
GAAGAAGGGATTCCATAGATGCAAACGAGGCGGCGGCAAACAGCGACCTCCCAGGCCCTACGTCTAGCCGGTCAGATCTTGAGCTGGCATTCAGCAACAAGGGCCTCAATACGGTCGACA
TGGTGGCCCTCTCCGGCGCGCACACCATCGGCCAGGCGCAGTGCGGGACCTTCAAGGACAGGATCTACAACGAGACTAACATCGACACGACCTTCGCCACATCTCTCCGGGCCAACTGCC
CCCGGTCCAACGGTGACGGCAGCCTGGCGAACCTGGACACGACGACGGCCAACACGTTCGACAACGCCTACTACACCAACCTCATGTCACAGAAGGGGCTCCTGCACTCGGACCAGGTGC
TGTTCAACAACGACACCACCGACAACACCGTCCGGAACTTCGCGTCCAACCCGGCGGCGTTCAGCAGCGCGTTCACGACGGCCATGATCAAGATGGGCAACATCGCGCCGAAGACGGGGA
CGCAAGGGCAGATCAGGCTTAGCTGCTCCAGGGTGAACTCGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCCTCTGCTTCTTGCATTTCACTGGTGGTGCTCGTGGCTCTGGCCACGGTGGCGTCGGCGCAGCTGTCGCCGACGTTCTACGACACGTCGTGCCCCAGGGCCCTGGCCACCATC
AAGAGCGGCGTCATGGCCGCCGTGAGCACCGACCCTCGGATGGGCGCGTCGCTGCTCCGGCTGCACTTCCACGACTGCTTCGTCCAAGGCTGTGACGCGTCTGTTCTGCTTTCTGGCATG
GAACAAAACGCTCTCCCGAACAACGGGTCACTGCGGGGCTTCGGCGTCATCGACAGCATCAAGACACAGATCGAGGCCATCTGCGCCCAGACCGTCTCCTGCGCCGACATCCTCACCGTC
GCTGCCCGTGACTCCGTTGTCGCCCTCGGAGGGCCATCATGGACAGTCCCTCTGGGAAGAAGGGATTCCATAGATGCAAACGAGGCGGCGGCAAACAGCGACCTCCCAGGCCCTACGTCT
AGCCGGTCAGATCTTGAGCTGGCATTCAGCAACAAGGGCCTCAATACGGTCGACATGGTGGCCCTCTCCGGCGCGCACACCATCGGCCAGGCGCAGTGCGGGACCTTCAAGGACAGGATC
TACAACGAGACTAACATCGACACGACCTTCGCCACATCTCTCCGGGCCAACTGCCCCCGGTCCAACGGTGACGGCAGCCTGGCGAACCTGGACACGACGACGGCCAACACGTTCGACAAC
GCCTACTACACCAACCTCATGTCACAGAAGGGGCTCCTGCACTCGGACCAGGTGCTGTTCAACAACGACACCACCGACAACACCGTCCGGAACTTCGCGTCCAACCCGGCGGCGTTCAGC
AGCGCGTTCACGACGGCCATGATCAAGATGGGCAACATCGCGCCGAAGACGGGGACGCAAGGGCAGATCAGGCTTAGCTGCTCCAGGGTGAACTCGTGA

Retrieve as FASTA