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Entry information : PpaPrx[P]50 ( PP00146G00260)
Entry ID 6950
Creation 2009-08-18 (Christophe Dunand)
Last sequence changes 2012-01-05 (Toky Ramarohetra)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-01-17 (Christophe Dunand)
Peroxidase information: PpaPrx[P]50 ( PP00146G00260)
Name (synonym) PpaPrx[P]50 ( PP00146G00260)
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrx[P]50
start..stop		 S start..stop
PpaPrx02 264 1.4e-89 1..191 1..192
PpaPrx36 213 1.2e-69 1..191 1..192
PpaPrx52 191 5.6e-61 1..189 1..189
PpaPrx06 191 5.6e-61 1..189 1..189
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6950' 'join(784918..785136,785368..785721)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 784918..785136 217 N° 2 785368..785721 352  
join(784918..785136,785368..785721)


exon

Literature and cross-references PpaPrx[P]50 ( PP00146G00260)
DNA ref. Phytozome 12:   scaffold_146 (784918..785721)
Protein sequence: PpaPrx[P]50 ( PP00146G00260)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   189 (162)
PWM (Da):   %s   20797.87 (17973.2)  
PI (pH):   %s   8.49 (8.49) Peptide Signal:   %s   cut: 28 range:28-189
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAHILRALSVLALILVALSLGVREVDAQLQYGLYR*SCPRAEKIV
LEEI*RYFKRDPTIAPGLLRLTFHDCFVGCDASVRFVGRNTERASHMNARLHGFRVIDIAKHCLEKACLRTESCADFLAYASRNAVVLTGGKCWQVVAGRRDGRISNKIELEQNIPPPTAGVDELVSTFAQKGLNTQDMVDLSGIY

Retrieve as FASTA  
Remarks Partial sequence from genomic. Stop in the sequence and last exon is partial. Last part is in reverse orientation. No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCACACATTCTAAGAGCCTTGTCAGTTTTGGCCTTGATACTCGTTGCATTATCCTTGGGAGTCCGTGAGGTGGACGCTCAGCTTCAGTACGGCTTATACAGGTAATCATGTCCTCGA
GCAGAAAAAATCGTACTCGAGGAGATCTAGAGATACTTTAAGAGGGACCCGACCATCGCTCCAGGACTGCTACGCTTGACATTCCACGACTGTTTCGTTTTTGCGTAAGCACCGCACGTC
TAGCCTCAAAGCACCATCTGGTTTCGTGATGCCTCAGTAACTGCAATGCCATATGTTCATTCTAGATTTCATGACAAGCGATGAGGCGTGCCATGAAATTCTGAATCAGTTTCACACTAA
AGACTAGTTTGTGATTTCTTCTGTGCATGAATAAGATAGAATTTGGAATGAGTTGCATTGTAGCCATCTACGGGCCTGAATCTTGTTCGGAGGGTTGCGACGCATCAGTTCGTTTTGTCG
GGAGAAACACTGAACGAGCGTCTCATATGAACGCCAGGTTGCATGGATTCCGAGTAATTGACATAGCCAAGCACTGCCTAGAGAAGGCTTGTCTCAGAACCGAGTCGTGTGCTGATTTTT
TGGCGTATGCCTCCCGCAACGCAGTTGTACTGACCGGTGGAAAGTGCTGGCAGGTTGTCGCAGGACGGAGAGATGGAAGAATCTCGAATAAAATCGAGCTCGAACAGAACATTCCTCCGC
CCACCGCCGGGGTCGATGAGCTCGTTTCCACATTCGCACAGAAGGGACTGAACACGCAAGACATGGTTGACTTGTCTGGTATATAT

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCACACATTCTAAGAGCCTTGTCAGTTTTGGCCTTGATACTCGTTGCATTATCCTTGGGAGTCCGTGAGGTGGACGCTCAGCTTCAGTACGGCTTATACAGGTAATCATGTCCTCGA
GCAGAAAAAATCGTACTCGAGGAGATCTAGAGATACTTTAAGAGGGACCCGACCATCGCTCCAGGACTGCTACGCTTGACATTCCACGACTGTTTCGTTGGTTGCGACGCATCAGTTCGT
TTTGTCGGGAGAAACACTGAACGAGCGTCTCATATGAACGCCAGGTTGCATGGATTCCGAGTAATTGACATAGCCAAGCACTGCCTAGAGAAGGCTTGTCTCAGAACCGAGTCGTGTGCT
GATTTTTTGGCGTATGCCTCCCGCAACGCAGTTGTACTGACCGGTGGAAAGTGCTGGCAGGTTGTCGCAGGACGGAGAGATGGAAGAATCTCGAATAAAATCGAGCTCGAACAGAACATT
CCTCCGCCCACCGCCGGGGTCGATGAGCTCGTTTCCACATTCGCACAGAAGGGACTGAACACGCAAGACATGGTTGACTTGTCTGGTATATAT

Retrieve as FASTA