Entry information : SmPrx15-2_60 (SmPrx15b_60)
Entry ID 7019
Creation 2009-10-08 (Christophe Dunand)
Last sequence changes 2009-10-08 (Christophe Dunand)
Sequence status complete
Reviewer Paula Nunes
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx15-2_60 (SmPrx15b_60)
Name (synonym) SmPrx15-2_60 (SmPrx15b_60)
Class Class III peroxidase    [Orthogroup: Prx202]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx15-2_60
start..stop
S start..stop
SmPrx15-1_0 672 0 1..329 1..329
SmPrx106-2_43 399 1e-139 26..323 58..356
SmPrx106-1_173 397 2e-139 26..323 54..352
GbPrx04 380 5e-133 26..326 28..329
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 791097..791309 213 N° 2 791363..791554 192 N° 3 791633..791798 166 N° 4 791853..792271 419
join(791097..791309,791363..791554,791633..791798,791853..792271)


exon

Literature and cross-references SmPrx15-2_60 (SmPrx15b_60)
DNA ref. Phytozome 12:   scaffold_60 (791097..792271)
mRNA ref. JGI transcript:   234418
Protein sequence: SmPrx15-2_60 (SmPrx15b_60)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (308)
PWM (Da):   %s   35725.01 (33604.9)  
PI (pH):   %s   5.36 (5.60) Peptide Signal:   %s   cut: 22 range:22-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAALAFVFTSVLVALVCIVDGHPLKLVPDYYASTCPEAEAIVRAVVEKAVIREARNAASLLRLHFHDCFVNGCDGSVLLDDTPTFTGEKMAAPNNGSIRALDVVDEIKAELESHCHGVVSCADVLAIAARDSVVVSGGPFYEVLLGRRDSLTASQAAANNSIPPPTSNITGLISSFRAVGLSVLDLVVLSGAHTIGRARCTNVVQRLYNQSGTFRADPTIEDDFLGYLVELCPQRGNPNTLANLDFVSPIYFDNHYFRNLQYFKGLLNSDEVLFTTSKETKELVNLFSDNKEAFFKHFPDSMIRMGNISPLTGDRGEVRFNCRYTNSGQ

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCGCTTGCATTCGTCTTCACCAGCGTCCTGGTTGCTCTTGTTTGCATTGTCGACGGCCACCCGCTGAAGCTCGTCCCCGACTACTATGCCTCGACTTGTCCTGAAGCCGAGGCC
ATCGTTAGAGCTGTCGTGGAGAAGGCAGTGATCAGGGAGGCCAGGAACGCGGCGTCGCTGCTAAGGCTACACTTCCACGACTGTTTCGTCAAT
GTAAGTTGGACGCTGCTCTTTCTTTCT
TCCGGCGCTAATGCTCTCCTTTGCAGGGCTGTGATGGATCTGTTCTGCTGGACGACACTCCAACTTTCACCGGAGAGAAGATGGCAGCCCCCAACAATGGCTCCATTCGAGCTCTCGACG
TGGTGGACGAGATCAAAGCCGAGCTCGAGAGCCATTGTCACGGAGTAGTGTCGTGTGCTGATGTGTTGGCGATCGCAGCCAGGGACTCCGTCGTCGTG
GTAAGTAAGCAAGAAGTAATTT
TCTTATGCTTCATGAATAACACGCCTCATTGTTTTCTTTTGTTTTTCCTTCTCTAGAGCGGTGGTCCTTTCTACGAAGTTCTTCTTGGAAGACGGGATAGCTTAACTGCCAGCCAAGCCG
CTGCCAACAATTCGATCCCACCTCCCACTTCCAACATCACGGGATTGATCTCGAGCTTCAGGGCCGTGGGATTATCCGTGCTCGATCTAGTCGTTCTCTCTG
GTAAGCTTGTCCAGCAGC
GAGTAAAGAGCTAAACGCATTGAAACTTTCATCCAGGCGCTCACACAATCGGCCGAGCTCGTTGCACCAACGTCGTCCAGCGTCTCTACAACCAGAGTGGAACGTTTCGTGCCGATCCAA
CCATCGAGGACGACTTCCTGGGATATCTCGTGGAGCTGTGCCCGCAGCGAGGCAATCCAAACACTCTCGCCAACCTCGACTTCGTGAGCCCGATCTACTTCGACAATCACTACTTCCGGA
ACCTCCAGTACTTCAAGGGCCTGCTCAACTCGGACGAGGTTCTCTTCACCACTTCCAAGGAGACGAAAGAGCTCGTCAACCTCTTTAGCGACAACAAGGAGGCCTTCTTCAAGCACTTCC
CAGACTCGATGATCCGGATGGGAAACATCAGCCCTCTCACTGGCGATCGCGGCGAGGTGAGATTCAATTGCCGATACACCAACAGCGGGCAGTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCGCTTGCATTCGTCTTCACCAGCGTCCTGGTTGCTCTTGTTTGCATTGTCGACGGCCACCCGCTGAAGCTCGTCCCCGACTACTATGCCTCGACTTGTCCTGAAGCCGAGGCC
ATCGTTAGAGCTGTCGTGGAGAAGGCAGTGATCAGGGAGGCCAGGAACGCGGCGTCGCTGCTAAGGCTACACTTCCACGACTGTTTCGTCAAT
GGCTGTGATGGATCTGTTCTGCTGGAC
GACACTCCAACTTTCACCGGAGAGAAGATGGCAGCCCCCAACAATGGCTCCATTCGAGCTCTCGACGTGGTGGACGAGATCAAAGCCGAGCTCGAGAGCCATTGTCACGGAGTAGTGTCG
TGTGCTGATGTGTTGGCGATCGCAGCCAGGGACTCCGTCGTCGTG
AGCGGTGGTCCTTTCTACGAAGTTCTTCTTGGAAGACGGGATAGCTTAACTGCCAGCCAAGCCGCTGCCAACAAT
TCGATCCCACCTCCCACTTCCAACATCACGGGATTGATCTCGAGCTTCAGGGCCGTGGGATTATCCGTGCTCGATCTAGTCGTTCTCTCTG
GCGCTCACACAATCGGCCGAGCTCGTTGC
ACCAACGTCGTCCAGCGTCTCTACAACCAGAGTGGAACGTTTCGTGCCGATCCAACCATCGAGGACGACTTCCTGGGATATCTCGTGGAGCTGTGCCCGCAGCGAGGCAATCCAAACACT
CTCGCCAACCTCGACTTCGTGAGCCCGATCTACTTCGACAATCACTACTTCCGGAACCTCCAGTACTTCAAGGGCCTGCTCAACTCGGACGAGGTTCTCTTCACCACTTCCAAGGAGACG
AAAGAGCTCGTCAACCTCTTTAGCGACAACAAGGAGGCCTTCTTCAAGCACTTCCCAGACTCGATGATCCGGATGGGAAACATCAGCCCTCTCACTGGCGATCGCGGCGAGGTGAGATTC
AATTGCCGATACACCAACAGCGGGCAGTAA

Retrieve as FASTA