Entry information : SmPrx31-1_84 (SmPrx31a_84)
Entry ID 7027
Creation 2009-10-09 (Paula Nunes)
Last sequence changes 2009-10-09 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx31-1_84 (SmPrx31a_84)
Name (synonym) SmPrx31-1_84 (SmPrx31a_84)
Class Class III peroxidase    [Orthogroup: Prx282]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx31-1_84
start..stop
S start..stop
SmPrx31-2_131 659 0 1..323 1..323
SmPrx74-2_39 372 6e-130 7..322 15..329
SmPrx74-1_88 369 2e-128 7..322 15..329
SmPrx50-1_126 369 2e-128 7..322 6..327
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 36306..36698 393 N° 2 35669..36247 579  
complement(join(35669..36247,36306..36698))


exon

Literature and cross-references SmPrx31-1_84 (SmPrx31a_84)
DNA ref. Phytozome 12:   scaffold_84 (36698..35669)
mRNA ref. JGI transcript:   126833
Protein sequence: SmPrx31-1_84 (SmPrx31a_84)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (304)
PWM (Da):   %s   34801.45 (32765.3)  
PI (pH):   %s   8.21 (8.21) Peptide Signal:   %s   cut: 20 range:20-323
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAFFHLHLLLSALSLVTAQQLSANFYDKSCPGLPSLASSVVSSAVAKEPRMAASLLRLHFHDCFVNGCDASLLLDDTSSITSEKNALPNRRSVRGFEVIDDIKSKVEQQCKGVVSCADIVSLAAREAVVLSGGPTWTVVYGRRDSTSASMDTANQDLPSFLDNATRLVTRFKAKGLSARDMVALSGGHTIGHAQCVFFRDRLYNFSGSGSSDPILQQHYVTELKQQCPSATHDRSISAFDPTTPAGFDNIYFKLLQVNKGLFRSDQVLYSTPGDTQDAVNAYSSSKAAFFKDFADAMVKMGNLSPLTGSKGQIRANCRLVNS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (intron 2). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCATTCTTCCACCTTCATCTTCTCCTCTCTGCGTTGAGCTTGGTAACGGCCCAGCAGCTGAGTGCAAACTTCTACGACAAGAGCTGCCCGGGCTTGCCTTCGCTGGCAAGTAGT
GTCGTGAGCAGCGCGGTAGCCAAGGAGCCTCGCATGGCGGCCTCCCTCCTCCGCCTCCACTTCCACGATTGCTTCGTCAATGGCTGCGACGCATCCTTGCTGCTGGACGACACGAGCAGT
ATCACCAGCGAGAAGAACGCACTGCCAAACAGGAGATCGGTGCGGGGATTCGAAGTCATCGACGACATCAAGAGCAAGGTGGAGCAGCAGTGCAAGGGCGTCGTGTCCTGCGCCGATATT
GTCTCCCTTGCCGCTCGAGAGGCTGTCGTTCTT
GTAAGCCGAAGTATAGCCAACCTTCTCAACTTCATTTCTTGTTGTTTGGTTCTTGCAGTCGGGAGGACCAACATGGACCGTTGTCTA
CGGTCGGAGAGACAGCACAAGCGCCAGCATGGACACTGCAAACCAGGACTTGCCTTCCTTCTTGGACAATGCAACCCGGCTGGTTACCAGATTCAAGGCCAAAGGGCTGAGTGCCAGAGA
CATGGTTGCCTTGTCCGGTGGCCACACTATCGGCCATGCTCAGTGTGTGTTCTTCCGTGACCGTCTCTACAACTTCAGCGGTTCTGGCAGCTCCGATCCCATTCTCCAGCAGCACTACGT
GACTGAACTGAAGCAGCAGTGCCCCTCAGCAACCCACGACCGCTCTATCTCCGCATTCGATCCCACCACTCCCGCAGGATTCGACAACATCTACTTCAAACTCCTACAGGTGAACAAAGG
CCTCTTCCGCTCCGACCAAGTCCTGTATTCCACACCTGGAGACACGCAGGATGCCGTCAACGCCTACAGCAGCAGCAAAGCTGCCTTCTTCAAGGACTTTGCCGATGCAATGGTAAAGAT
GGGCAACCTCTCGCCGTTGACTGGAAGCAAAGGCCAAATCCGAGCCAACTGCAGGCTAGTCAACAGTTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCATTCTTCCACCTTCATCTTCTCCTCTCTGCGTTGAGCTTGGTAACGGCCCAGCAGCTGAGTGCAAACTTCTACGACAAGAGCTGCCCGGGCTTGCCTTCGCTGGCAAGTAGT
GTCGTGAGCAGCGCGGTAGCCAAGGAGCCTCGCATGGCGGCCTCCCTCCTCCGCCTCCACTTCCACGATTGCTTCGTCAATGGCTGCGACGCATCCTTGCTGCTGGACGACACGAGCAGT
ATCACCAGCGAGAAGAACGCACTGCCAAACAGGAGATCGGTGCGGGGATTCGAAGTCATCGACGACATCAAGAGCAAGGTGGAGCAGCAGTGCAAGGGCGTCGTGTCCTGCGCCGATATT
GTCTCCCTTGCCGCTCGAGAGGCTGTCGTTCTT
TCGGGAGGACCAACATGGACCGTTGTCTACGGTCGGAGAGACAGCACAAGCGCCAGCATGGACACTGCAAACCAGGACTTGCCTTCC
TTCTTGGACAATGCAACCCGGCTGGTTACCAGATTCAAGGCCAAAGGGCTGAGTGCCAGAGACATGGTTGCCTTGTCCGGTGGCCACACTATCGGCCATGCTCAGTGTGTGTTCTTCCGT
GACCGTCTCTACAACTTCAGCGGTTCTGGCAGCTCCGATCCCATTCTCCAGCAGCACTACGTGACTGAACTGAAGCAGCAGTGCCCCTCAGCAACCCACGACCGCTCTATCTCCGCATTC
GATCCCACCACTCCCGCAGGATTCGACAACATCTACTTCAAACTCCTACAGGTGAACAAAGGCCTCTTCCGCTCCGACCAAGTCCTGTATTCCACACCTGGAGACACGCAGGATGCCGTC
AACGCCTACAGCAGCAGCAAAGCTGCCTTCTTCAAGGACTTTGCCGATGCAATGGTAAAGATGGGCAACCTCTCGCCGTTGACTGGAAGCAAAGGCCAAATCCGAGCCAACTGCAGGCTA
GTCAACAGTTAG

Retrieve as FASTA