Entry information : SmPrx30-2_131 (SmPrx30b_131)
Entry ID 7031
Creation 2009-10-12 (Paula Nunes)
Last sequence changes 2009-10-12 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx30-2_131 (SmPrx30b_131)
Name (synonym) SmPrx30-2_131 (SmPrx30b_131)
Class Class III peroxidase    [Orthogroup: Prx047]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx30-2_131
start..stop
S start..stop
SmPrx30-1_84 692 0 1..335 1..335
SmPrx104-1_151 649 0 1..336 4..340
SmPrx104-2_171 647 0 1..336 4..340
SmPrx13-2_57 418 1e-147 29..331 34..332
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 302879..303091 213 N° 2 302624..302821 198 N° 3 302357..302519 163 N° 4 301859..302295 437
complement(join(301859..302295,302357..302519,302624..302821,302879..303091))


exon

Literature and cross-references SmPrx30-2_131 (SmPrx30b_131)
DNA ref. Phytozome 12:   scaffold_131 (303091..301859)
mRNA ref. JGI transcript:   135010
Protein sequence: SmPrx30-2_131 (SmPrx30b_131)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (309)
PWM (Da):   %s   36934.39 (34021.7)  
PI (pH):   %s   8.57 (8.02) Peptide Signal:   %s   cut: 28 range:28-336
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFPKRATVSILVVVFLSLISSRNVLASHSYARTCPNAESIIRDTINEHASRDPTIPAGLIRLHFHDCFVNGCDGSILLDSTPTDGTNVEKFAPPNRDSARGFEVIEDAKRRLEQACPGIVSCADTVAIAARDSTVKMGGQHYIVATGRYDGRVSSLQLATNIPSPSMDASTLIENFKNQGLSVQDLVVLSGAHTLGTSKCNFFASGRFDRLYNFRNTSRGDETVNPAYLQHLRNRCPREGSANTVELDKGSQFSFDNSYFKNLERRNGLLTSDQVLFESERTSGLVRSYAYNSRQFASHFGQSMVRMGSIGWKTKENGEIRTVCNAVNVNKHNML

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No ESTs.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTTTCCAAAGAGAGCAACAGTGTCAATACTAGTAGTAGTCTTTCTCTCTTTGATCAGCTCCAGGAATGTTTTGGCATCGCACAGCTACGCAAGAACTTGTCCAAATGCGGAGTCG
ATTATCAGAGACACGATCAATGAGCACGCTAGCCGGGACCCTACAATCCCCGCGGGACTGATTCGCTTGCACTTCCACGACTGCTTCGTGAAC
GTAAGCTAGCTACAAGATGAATTCACC
AGATTTCTCACCTTGCCTAAATCACTCCAGGGTTGTGATGGTTCCATCCTTCTCGACTCCACTCCAACAGACGGTACCAATGTCGAGAAATTCGCTCCTCCAAACCGGGACTCCGCCCGA
GGATTTGAAGTTATCGAGGATGCGAAAAGAAGGCTGGAACAGGCTTGCCCTGGTATAGTTTCCTGTGCCGACACTGTGGCCATCGCCGCAAGAGATTCAACCGTTAAG
GTTAGTTCCTGA
TTCATAGTGGAGTTTTCGCCCCTCCATCAAGCCATCTTTTTCTTCTTCTCCTACTTCTTCTTCTCCTCTCATATTTGGGTCTTGGATTATAGATGGGAGGCCAGCACTACATAGTAGCCA
CTGGACGTTACGATGGAAGAGTGTCGAGCTTGCAGCTGGCCACAAACATTCCATCACCATCCATGGACGCCTCGACTCTCATCGAAAATTTCAAGAACCAAGGCTTGTCCGTTCAAGACC
TTGTCGTTCTGTCAG
GTGAGATCACTCGACTTTCTTGCTGGATCCATTCACTCACGATCTCTTTTTAATTTTCCAGGAGCTCACACACTGGGAACCTCCAAATGCAACTTCTTCGCCAGT
GGCCGCTTCGACCGCCTCTACAACTTCAGAAACACGAGTAGGGGCGACGAGACGGTAAATCCCGCGTACTTGCAGCACCTCCGCAACAGATGCCCGCGCGAGGGGTCCGCAAACACGGTG
GAGCTTGACAAGGGCTCGCAATTCAGCTTTGACAACTCCTACTTCAAGAACTTGGAGCGGAGGAATGGACTTCTCACCTCTGACCAGGTGCTTTTCGAGAGTGAGCGCACGAGTGGACTT
GTGCGATCCTACGCGTACAATTCCAGGCAGTTTGCGTCGCATTTTGGGCAATCTATGGTAAGAATGGGAAGCATCGGGTGGAAGACGAAAGAGAATGGGGAGATTAGAACGGTGTGTAAT
GCCGTGAATGTAAATAAACACAACATGTTGTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTTTCCAAAGAGAGCAACAGTGTCAATACTAGTAGTAGTCTTTCTCTCTTTGATCAGCTCCAGGAATGTTTTGGCATCGCACAGCTACGCAAGAACTTGTCCAAATGCGGAGTCG
ATTATCAGAGACACGATCAATGAGCACGCTAGCCGGGACCCTACAATCCCCGCGGGACTGATTCGCTTGCACTTCCACGACTGCTTCGTGAAC
GGTTGTGATGGTTCCATCCTTCTCGAC
TCCACTCCAACAGACGGTACCAATGTCGAGAAATTCGCTCCTCCAAACCGGGACTCCGCCCGAGGATTTGAAGTTATCGAGGATGCGAAAAGAAGGCTGGAACAGGCTTGCCCTGGTATA
GTTTCCTGTGCCGACACTGTGGCCATCGCCGCAAGAGATTCAACCGTTAAG
ATGGGAGGCCAGCACTACATAGTAGCCACTGGACGTTACGATGGAAGAGTGTCGAGCTTGCAGCTGGCC
ACAAACATTCCATCACCATCCATGGACGCCTCGACTCTCATCGAAAATTTCAAGAACCAAGGCTTGTCCGTTCAAGACCTTGTCGTTCTGTCAG
GAGCTCACACACTGGGAACCTCCAAA
TGCAACTTCTTCGCCAGTGGCCGCTTCGACCGCCTCTACAACTTCAGAAACACGAGTAGGGGCGACGAGACGGTAAATCCCGCGTACTTGCAGCACCTCCGCAACAGATGCCCGCGCGAG
GGGTCCGCAAACACGGTGGAGCTTGACAAGGGCTCGCAATTCAGCTTTGACAACTCCTACTTCAAGAACTTGGAGCGGAGGAATGGACTTCTCACCTCTGACCAGGTGCTTTTCGAGAGT
GAGCGCACGAGTGGACTTGTGCGATCCTACGCGTACAATTCCAGGCAGTTTGCGTCGCATTTTGGGCAATCTATGGTAAGAATGGGAAGCATCGGGTGGAAGACGAAAGAGAATGGGGAG
ATTAGAACGGTGTGTAATGCCGTGAATGTAAATAAACACAACATGTTGTAA

Retrieve as FASTA