Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
346 |
PWM (Da): |
36862.89 |
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PI (pH):
| 8.74 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MNSLAAFFAALSGKYLARSLGGGARMKTYRGMLLLSVMLVATFSGGNSGLRIGFYSSSCPNAESIVRAAFSGNFITDPTAPAALLRLAFHDCQVGCDASILLDSKGSIKSERDSDKNFGIRRLDFIDRIKSMLEAACPGVVSCADIIVLVARESIVFTGGPTIPVLTGRRDGTAASNAAADRLLPPATVSVDNFISLFASKGLSLDESVAIIGAHTIGVGHCVNIVNRLYPNQDSKIGLLFASRLRVQCPTANPRMLNNITVINNDMTNLVFDNQYFRDLMNGQGLFTIDSELALDSRTSPVVARFSTNQQLFLDTFSSAFVKLTSSNVLTGQSGQVRKYCHSVN |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (introns 1 and 3 and extra 5' intron ). No EST. Incorrect predict from JGI (Very long PS, repeated residus => intronic sequence predicted in constrained condition. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAACTCTCTAGCAGCATTCTTCGCTGCTCTTTCCGGCAAGTACTTAGCTCGATCATTAGGAGGAGGTGCTAGAATGAAGACTTACAGGGGAATGCTGCTCCTTTCAGTGATGCTAGTA GCTACATTGTCTTGGGCAGCAAGGGAAACAAGCGAAGTCATGGAACCGGCGCACCATTGTCCGGACCACGACGACGGCGATTATTACAGGTGCAGAGGTAGATTTAACGGGGGTGGAGGT CCCAACATCGGTGATGGAAGTGGCGGTAACTTTGGTGGAGGCAACGGCGGTAACTTTGGTGGTGGTGGAGGAAACTTTGGAAACGGGGGAGGGCCTGGTTCCAACTTTGGGGGTGGAACT GGGGGGAGCTTTGGAAATGGCGGTGGTGGCCCGGGTTCCAACTTCGGGGGTGGTGGAAGCTTTGGGAATGGAGGTGGTGGCCCGGGTTCCAACTTTGGAGGTGGTGGTCCGGGTTCCAAT TTTGGAGGTGGAAGTGGAGGGAGTTTTGGCAATGGAGGTGGTCCGGGTTCGAACTTTGGTGGTGGAAGTGGAGGGAATTTTGGCAATGGAGGTGGTCCGGGTTCTAACTTTGGTGGTGGA AGCGGAGGGAGTTTTGGCAGTCCTGGAGGGAACATCGGCAGTGGAGGAGGCAGCGGAATTGGTGGTGGAAGCGGAGGGAGTTTTGGCAGTCCTGGAGGGAACATCGGCAATGGAGGAGGC AGTGGAATTGGTTTTGGTAGCCCGAATGCTGGCGGAGGTGATGCGTCTGGGAGCAGCGGTGGTAACTCAGGTCTAAGAATCGGTTTCTACTCGTCATCGTGTCCAAATGCGGAGAGCATT GTGCGAGCTGCCTTCTCTGGAAATTTTATTACCGATCCAACAGCACCCGCAGCACTCCTTCGGCTGGCTTTTCACGACTGCCAAGTCGGGGTAAGCATTTTTCTCGTTTCCTTTTCATGC TTTTTTATACGTTTTGTTCTACAGGGTTGCGACGCGTCCATCTTGCTCGACTCGAAAGGTTCCATCAAAAGCGAGAGAGACTCGGACAAGAACTTTGGCATCCGCCGCTTGGATTTCATC GACAGGATCAAGTCGATGCTGGAGGCTGCCTGTCCGGGAGTCGTCTCGTGCGCGGACATCATCGTTCTGGTGGCCAGAGAATCCATCGTCTTCACCGGAGGCCCGACAATCCCCGTGCTC ACAGGAAGAAGAGATGGCACAGCCGCTTCCAACGCCGCAGCCGACAGGCTGTTGCCTCCAGCAACCGTAAGCGTCGACAACTTCATCAGCCTCTTCGCATCCAAGGGCCTCTCTCTCGAC GAAAGCGTTGCAATCATCGGTACGTTTCAAGGCTTTTCTTTCCAGCAAACTTTCCAAGGACGATTGATCCGAACTTCTGTACTTTTGCATTCCAGGAGCTCACACAATTGGAGTTGGGCA CTGCGTCAACATTGTGAATCGGCTCTATCCAAACCAGGACAGTAAGATCGGCCTCCTGTTCGCGAGCCGGCTGAGAGTCCAGTGCCCGACGGCCAATCCCCGGATGCTCAACAACATTAC AGTGATCAACAACGATATGACCAACCTCGTGTTTGACAACCAGTACTTCCGGGACCTTATGAACGGGCAGGGGCTCTTCACCATCGATTCGGAGCTTGCGCTGGACAGCCGCACGTCGCC AGTGGTGGCGCGCTTCTCCACGAACCAGCAGCTCTTCCTCGACACATTCTCTTCGGCTTTCGTCAAGCTCACGTCCAGCAATGTCTTGACGGGACAGAGTGGACAGGTTCGAAAGTACTG CCACTCGGTGAACTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAACTCTCTAGCAGCATTCTTCGCTGCTCTTTCCGGCAAGTACTTAGCTCGATCATTAGGAGGAGGTGCTAGAATGAAGACTTACAGGGGAATGCTGCTCCTTTCAGTGATGCTAGTA GCTACATTCAGCGGTGGTAACTCAGGTCTAAGAATCGGTTTCTACTCGTCATCGTGTCCAAATGCGGAGAGCATTGTGCGAGCTGCCTTCTCTGGAAATTTTATTACCGATCCAACAGCA CCCGCAGCACTCCTTCGGCTGGCTTTTCACGACTGCCAAGTCGGGGGTTGCGACGCGTCCATCTTGCTCGACTCGAAAGGTTCCATCAAAAGCGAGAGAGACTCGGACAAGAACTTTGGC ATCCGCCGCTTGGATTTCATCGACAGGATCAAGTCGATGCTGGAGGCTGCCTGTCCGGGAGTCGTCTCGTGCGCGGACATCATCGTTCTGGTGGCCAGAGAATCCATCGTCTTCACCGGA GGCCCGACAATCCCCGTGCTCACAGGAAGAAGAGATGGCACAGCCGCTTCCAACGCCGCAGCCGACAGGCTGTTGCCTCCAGCAACCGTAAGCGTCGACAACTTCATCAGCCTCTTCGCA TCCAAGGGCCTCTCTCTCGACGAAAGCGTTGCAATCATCGGAGCTCACACAATTGGAGTTGGGCACTGCGTCAACATTGTGAATCGGCTCTATCCAAACCAGGACAGTAAGATCGGCCTC CTGTTCGCGAGCCGGCTGAGAGTCCAGTGCCCGACGGCCAATCCCCGGATGCTCAACAACATTACAGTGATCAACAACGATATGACCAACCTCGTGTTTGACAACCAGTACTTCCGGGAC CTTATGAACGGGCAGGGGCTCTTCACCATCGATTCGGAGCTTGCGCTGGACAGCCGCACGTCGCCAGTGGTGGCGCGCTTCTCCACGAACCAGCAGCTCTTCCTCGACACATTCTCTTCG GCTTTCGTCAAGCTCACGTCCAGCAATGTCTTGACGGGACAGAGTGGACAGGTTCGAAAGTACTGCCACTCGGTGAACTAG |
Retrieve as FASTA
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