Entry information : SmPrx71-1_4 (SmPrx71a_4)
Entry ID 7048
Creation 2009-10-18 (Paula Nunes)
Last sequence changes 2009-10-18 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx71-1_4 (SmPrx71a_4)
Name (synonym) SmPrx71-1_4 (SmPrx71a_4)
Class Class III peroxidase    [Orthogroup: Prx205]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx71-1_4
start..stop
S start..stop
SmPrx71-2_98 637 0 1..319 1..319
SmPrx91-1_24 414 2e-146 10..319 12..322
SmPrx91-2_26 412 5e-146 10..319 12..322
SmPrx58-1_129 384 8e-135 7..319 3..315
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3557968..3558171 204 N° 2 3558242..3558424 183 N° 3 3558490..3559062 573  
join(3557968..3558171,3558242..3558424,3558490..3559062)


exon

Literature and cross-references SmPrx71-1_4 (SmPrx71a_4)
DNA ref. Phytozome 12:   scaffold_4 (3557968..3559062)
mRNA ref. JGI transcript:   81737
Protein sequence: SmPrx71-1_4 (SmPrx71a_4)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319 (298)
PWM (Da):   %s   33827.72 (31676.6)  
PI (pH):   %s   5.53 (5.53) Peptide Signal:   %s   cut: 22 range:22-319
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MACKLLFLAFLALSLGDCALGALSSSFYATSCPNLTNIVHAAVQQVVASEPRMCASLIRLFFHDCHVNGCDASILLAGASLEQNAFPNINSVRGYDVVNNIKALIEAQCPGKVSCADELVLIAQQCVTALGGPSWSVLFGRRDSLNASQSAANTNLPPPTFNVSALIANFKAHGLSLQDMVALSGAHTVGKSHCSSFKPRLYGPFQAPDAMNPTFNTSLQGQCPNVSSSDNNLVDLDQLTPVVFDNKYFVDLLNGTGVLFSDETLAIGGNSTAESLVWTYASNQTRFFLDFVTGMINMGNESPLQAPNGQIRLNCSRVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTGTAAACTTCTCTTCCTTGCATTCCTAGCTTTAAGCCTAGGTGATTGTGCACTGGGAGCTCTCAGCTCCTCGTTCTACGCCACCTCATGCCCGAATCTCACCAACATCGTGCAT
GCCGCAGTGCAGCAGGTCGTTGCGTCCGAACCCAGAATGTGTGCTTCGCTAATCCGCCTCTTCTTCCACGATTGTCATGTGAAC
GTAAGCTCGAACATCGCATTTTCCTTCTTTTAAATG
ATATAAACTCTGGAATTCAATGGATCATATGCAGGGCTGCGATGCGTCGATTCTCTTGGCCGGAGCGAGCCTCGAGCAGAACGCGTTCCCGAACATAAACTCGGTGCGAGGATACGACGT
TGTCAACAACATCAAGGCTCTCATCGAGGCCCAGTGCCCCGGGAAGGTGTCTTGCGCGGACGAGCTCGTCTTGATCGCCCAACAATGCGTCACCGCA
GTGCGTATATCAACAATGATATA
TCCCATGATCATTTACTAATTGATTTTCCATGCTACGTGCAGCTTGGAGGCCCATCCTGGAGCGTCCTCTTCGGACGAAGGGACAGCCTAAACGCGAGCCAGTCGGCAGCGAACACAAAC
CTCCCACCTCCCACCTTCAACGTCTCGGCGCTCATCGCAAACTTCAAGGCCCACGGCCTGTCGCTCCAGGACATGGTCGCCCTCTCTGGAGCCCACACCGTCGGGAAATCCCACTGCTCC
AGCTTCAAGCCCCGCCTCTACGGCCCCTTCCAGGCCCCGGACGCCATGAATCCCACCTTCAACACTTCGCTGCAGGGCCAGTGCCCCAACGTGAGCTCCAGCGACAACAATCTCGTGGAT
CTGGACCAGCTCACGCCGGTGGTGTTCGACAACAAGTATTTCGTGGATCTCTTGAACGGCACCGGGGTGCTCTTCTCGGACGAGACGCTCGCCATCGGTGGCAACTCCACTGCCGAGTCG
CTGGTGTGGACTTATGCATCCAACCAGACGCGCTTCTTCCTGGATTTCGTGACTGGGATGATCAACATGGGGAACGAGAGCCCGCTCCAAGCTCCGAATGGACAGATCCGGCTCAATTGC
TCCCGGGTCAATTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTGTAAACTTCTCTTCCTTGCATTCCTAGCTTTAAGCCTAGGTGATTGTGCACTGGGAGCTCTCAGCTCCTCGTTCTACGCCACCTCATGCCCGAATCTCACCAACATCGTGCAT
GCCGCAGTGCAGCAGGTCGTTGCGTCCGAACCCAGAATGTGTGCTTCGCTAATCCGCCTCTTCTTCCACGATTGTCATGTGAAC
GGCTGCGATGCGTCGATTCTCTTGGCCGGAGCGAGC
CTCGAGCAGAACGCGTTCCCGAACATAAACTCGGTGCGAGGATACGACGTTGTCAACAACATCAAGGCTCTCATCGAGGCCCAGTGCCCCGGGAAGGTGTCTTGCGCGGACGAGCTCGTC
TTGATCGCCCAACAATGCGTCACCGCA
CTTGGAGGCCCATCCTGGAGCGTCCTCTTCGGACGAAGGGACAGCCTAAACGCGAGCCAGTCGGCAGCGAACACAAACCTCCCACCTCCCACC
TTCAACGTCTCGGCGCTCATCGCAAACTTCAAGGCCCACGGCCTGTCGCTCCAGGACATGGTCGCCCTCTCTGGAGCCCACACCGTCGGGAAATCCCACTGCTCCAGCTTCAAGCCCCGC
CTCTACGGCCCCTTCCAGGCCCCGGACGCCATGAATCCCACCTTCAACACTTCGCTGCAGGGCCAGTGCCCCAACGTGAGCTCCAGCGACAACAATCTCGTGGATCTGGACCAGCTCACG
CCGGTGGTGTTCGACAACAAGTATTTCGTGGATCTCTTGAACGGCACCGGGGTGCTCTTCTCGGACGAGACGCTCGCCATCGGTGGCAACTCCACTGCCGAGTCGCTGGTGTGGACTTAT
GCATCCAACCAGACGCGCTTCTTCCTGGATTTCGTGACTGGGATGATCAACATGGGGAACGAGAGCCCGCTCCAAGCTCCGAATGGACAGATCCGGCTCAATTGCTCCCGGGTCAATTGA

Retrieve as FASTA