Entry information : SmPrx58-1_129 (SmPrx58a_129)
Entry ID 7057
Creation 2009-10-19 (Christophe Dunand)
Last sequence changes 2009-10-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx58-1_129 (SmPrx58a_129)
Name (synonym) SmPrx58-1_129 (SmPrx58a_129)
Class Class III peroxidase    [Orthogroup: Prx073]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx58-1_129
start..stop
S start..stop
SmPrx58-2_33 634 0 1..315 1..315
SmPrx89-1_24 625 0 1..315 4..318
SmPrx93-2_26 623 0 1..315 4..318
SmPrx92-1_24 619 0 1..315 4..318
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 278667..278861 195 N° 2 278423..278605 183 N° 3 277804..278373 570  
complement(join(277804..278373,278423..278605,278667..278861))


exon

Literature and cross-references SmPrx58-1_129 (SmPrx58a_129)
DNA ref. Phytozome 12:   scaffold_129 (278861..277804)
mRNA ref. JGI transcript:   134739
Protein sequence: SmPrx58-1_129 (SmPrx58a_129)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   315 (298)
PWM (Da):   %s   33510.56 (31788.6)  
PI (pH):   %s   7.99 (7.98) Peptide Signal:   %s   cut: 18 range:18-315
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSFVLVLLLALHGSALGQTLSSSFYRSSCPNLTTIVRAAVQQAVQAEARIAASFVRLHFHDCFVNGCDASILLDGANLEQNAFPNAGSARGFDIVDSIKSSVESSCPGVVSCADLLALIARDSVVALNGPSWTVVFGRRDSLTASQSAANSNLPPPTLNASALIASFQNQGLSTRDMVALSGAHTIGQAQCTTFKARLYGPFQRGDQMDQSFNTSLQSSCPSSNGDTNLSPLDVQTPTSFDNRYFRNLQNRRGLLFSDQTLFSGGQASTRNLVNSYALSQSTFFQDFGNAMVRMGNINVLTGSNGEIRRNCGRTN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTTTGTGCTCGTGTTGTTGCTGGCTCTGCATGGAAGTGCTCTTGGCCAAACTTTGAGCTCCAGCTTCTACCGCTCCTCGTGCCCAAATCTCACCACCATCGTGAGAGCTGCAGTG
CAGCAGGCCGTCCAGGCAGAGGCTCGAATCGCAGCCTCGTTTGTTCGCCTCCATTTCCACGACTGCTTTGTCAAT
GTAGAAAGCTTCCATAAGTTTCATTCAAGCATATTGAAAGAACCA
TGCATTTCTCTTGCAGGGATGTGATGCTTCCATTCTTCTAGACGGCGCAAACCTGGAGCAAAACGCGTTTCCAAACGCTGGCTCCGCCCGTGGCTTCGACATCGTCGACTCCATCAAGAG
CTCCGTCGAGAGCTCCTGCCCGGGTGTTGTCTCCTGCGCTGACTTACTGGCGCTCATTGCCCGGGACTCCGTAGTCGCG
GTAAACTCTCAAAGTCAACGGTCAAAAGCTGACAATATCGT
TTTTACAGCTGAACGGGCCTTCGTGGACGGTGGTGTTTGGAAGGAGGGATAGCTTAACAGCAAGCCAATCCGCTGCAAATTCCAACCTTCCTCCTCCAACTTTGAATGCCTCAGCGCTCA
TCGCGAGTTTCCAAAACCAGGGGCTTTCAACCAGAGATATGGTGGCTCTCTCTGGGGCTCACACCATTGGGCAGGCCCAGTGCACCACCTTTAAGGCTCGGCTCTACGGGCCCTTCCAAA
GAGGGGACCAGATGGATCAAAGTTTTAACACCTCGTTGCAAAGCTCGTGCCCGAGCAGCAATGGCGACACCAATCTCTCGCCGCTCGACGTCCAGACGCCCACCAGCTTTGACAATCGCT
ACTTTAGGAACTTGCAGAACCGGAGAGGGTTGCTTTTCTCGGACCAGACGCTCTTTTCCGGGGGTCAGGCCAGCACGAGGAATCTCGTCAACTCGTACGCTTTGAGCCAGAGCACTTTCT
TCCAGGACTTTGGCAATGCCATGGTAAGGATGGGCAATATCAATGTGCTGACTGGATCCAATGGAGAGATTCGAAGAAACTGTGGAAGAACAAACTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTTTGTGCTCGTGTTGTTGCTGGCTCTGCATGGAAGTGCTCTTGGCCAAACTTTGAGCTCCAGCTTCTACCGCTCCTCGTGCCCAAATCTCACCACCATCGTGAGAGCTGCAGTG
CAGCAGGCCGTCCAGGCAGAGGCTCGAATCGCAGCCTCGTTTGTTCGCCTCCATTTCCACGACTGCTTTGTCAAT
GGATGTGATGCTTCCATTCTTCTAGACGGCGCAAACCTGGAGCAA
AACGCGTTTCCAAACGCTGGCTCCGCCCGTGGCTTCGACATCGTCGACTCCATCAAGAGCTCCGTCGAGAGCTCCTGCCCGGGTGTTGTCTCCTGCGCTGACTTACTGGCGCTCATTGCC
CGGGACTCCGTAGTCGCG
CTGAACGGGCCTTCGTGGACGGTGGTGTTTGGAAGGAGGGATAGCTTAACAGCAAGCCAATCCGCTGCAAATTCCAACCTTCCTCCTCCAACTTTGAATGCC
TCAGCGCTCATCGCGAGTTTCCAAAACCAGGGGCTTTCAACCAGAGATATGGTGGCTCTCTCTGGGGCTCACACCATTGGGCAGGCCCAGTGCACCACCTTTAAGGCTCGGCTCTACGGG
CCCTTCCAAAGAGGGGACCAGATGGATCAAAGTTTTAACACCTCGTTGCAAAGCTCGTGCCCGAGCAGCAATGGCGACACCAATCTCTCGCCGCTCGACGTCCAGACGCCCACCAGCTTT
GACAATCGCTACTTTAGGAACTTGCAGAACCGGAGAGGGTTGCTTTTCTCGGACCAGACGCTCTTTTCCGGGGGTCAGGCCAGCACGAGGAATCTCGTCAACTCGTACGCTTTGAGCCAG
AGCACTTTCTTCCAGGACTTTGGCAATGCCATGGTAAGGATGGGCAATATCAATGTGCTGACTGGATCCAATGGAGAGATTCGAAGAAACTGTGGAAGAACAAACTAG

Retrieve as FASTA