Entry information : SmPrx77-2_155 (SmPrx77b_155)
Entry ID 7066
Creation 2009-10-19 (Paula Nunes)
Last sequence changes 2009-10-19 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx77-2_155 (SmPrx77b_155)
Name (synonym) SmPrx77-2_155 (SmPrx77b_155)
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx77-2_155
start..stop
S start..stop
SmPrx77-1_52 667 0 1..330 1..330
GbPrx53 388 4e-136 26..327 30..330
PtaPrx97 375 9e-131 30..327 30..326
PabPrx206 373 5e-130 31..327 39..334
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 69263..69493 231 N° 2 69569..69757 189 N° 3 69841..70006 166 N° 4 70072..70478 407
join(69263..69493,69569..69757,69841..70006,70072..70478)


exon

Literature and cross-references SmPrx77-2_155 (SmPrx77b_155)
DNA ref. Phytozome 12:   scaffold_155 (69263..70478)
mRNA ref. JGI transcript:   137067
Protein sequence: SmPrx77-2_155 (SmPrx77b_155)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (311)
PWM (Da):   %s   35760.93 (33819.8)  
PI (pH):   %s   4.83 (4.83) Peptide Signal:   %s   cut: 20 range:20-330
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLAILLILSLLGSLSFANAQESSSGGDGGSGLKHKFYALSCPQAEDIARRTLQRNRMSDPTAPAALLRVVFHDCQVEGCDASILLETSSAMTAETVSEKNFSIRRLDYIHDIKAAIEKECPGIVSCADIIVMAARDAIAMSGGPQISIETGRRDTLFASNLNADEALPPPTLTVSEMLDTLAEKGLDIEESVAILGAHTLGVGHCLNFINRFDPQDNGPQMSPFFSTALRVLCQSPPSMSNATFAPNDLTNFMFDNQYFRDLQGQRGLLTVDAELAIDPRTKKHVDLFALNQLLFFAKFSDGFVKLTSFNVLTGSDGEIRRDCRAVNREP

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No ESTs
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGGCGATCTTGCTGATCTTGTCGCTCCTGGGAAGCTTAAGCTTTGCCAATGCTCAGGAATCATCAAGCGGCGGCGATGGTGGCAGTGGGCTCAAGCACAAATTCTACGCGCTCTCG
TGCCCCCAGGCAGAGGATATTGCTCGAAGAACGCTCCAACGAAACAGGATGAGCGATCCCACCGCCCCTGCGGCGCTCCTCCGCGTCGTCTTCCATGATTGCCAGGTTGAG
GTACGTGAT
TGCGGTGATCGTGACGATTCTTGAGAGGAAAGGAGGGAAGAGAAAGCTCTCGACTTGCTTTTGCAGGGATGCGATGCTTCGATTCTACTCGAGACATCTTCCGCGATGACCGCCGAGACC
GTGTCGGAGAAGAATTTCTCCATTCGCCGCTTGGATTACATTCACGACATCAAGGCCGCCATTGAAAAGGAATGCCCCGGCATCGTCTCTTGCGCCGACATCATCGTTATGGCTGCCAGG
GACGCCATCGCAATG
GTGTGGGGATCTTTTCTTGTTCGATCGATCGATCGATCAGCTTGAGTTGAGGAACTTCTAACACTTTGCTCTTGATCTTGCAGTCTGGTGGTCCACAAATCTCGA
TCGAAACTGGGCGAAGAGACACTCTCTTCGCCAGTAACTTAAACGCGGACGAAGCGCTGCCCCCTCCAACATTGACTGTGAGTGAGATGCTCGACACTCTCGCGGAAAAAGGCCTTGACA
TCGAAGAGAGCGTCGCCATCTTAG
GTAAGAAAACCATCCCAATCCCATCTCCGCATCGATCGATCATGGATTGGTCGATTTCTTGGCAGGAGCTCACACATTGGGCGTTGGGCACTGCCT
GAATTTCATCAATCGCTTCGATCCCCAGGACAATGGCCCCCAGATGTCGCCCTTCTTCTCCACGGCGCTCAGGGTCTTGTGCCAATCACCCCCTTCGATGAGCAATGCCACATTCGCGCC
CAACGATCTCACCAATTTCATGTTTGACAACCAGTACTTCCGCGATCTGCAAGGCCAGCGCGGATTGCTCACCGTGGACGCGGAGCTCGCCATCGATCCACGCACCAAGAAGCATGTCGA
TCTCTTCGCGCTCAATCAGCTCCTCTTCTTCGCCAAATTCAGCGACGGCTTCGTCAAGCTCACCAGCTTCAATGTGCTCACGGGCAGCGATGGTGAGATTCGGAGGGATTGCCGGGCTGT
GAATCGAGAGCCCTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGGCGATCTTGCTGATCTTGTCGCTCCTGGGAAGCTTAAGCTTTGCCAATGCTCAGGAATCATCAAGCGGCGGCGATGGTGGCAGTGGGCTCAAGCACAAATTCTACGCGCTCTCG
TGCCCCCAGGCAGAGGATATTGCTCGAAGAACGCTCCAACGAAACAGGATGAGCGATCCCACCGCCCCTGCGGCGCTCCTCCGCGTCGTCTTCCATGATTGCCAGGTTGAG
GGATGCGAT
GCTTCGATTCTACTCGAGACATCTTCCGCGATGACCGCCGAGACCGTGTCGGAGAAGAATTTCTCCATTCGCCGCTTGGATTACATTCACGACATCAAGGCCGCCATTGAAAAGGAATGC
CCCGGCATCGTCTCTTGCGCCGACATCATCGTTATGGCTGCCAGGGACGCCATCGCAATG
TCTGGTGGTCCACAAATCTCGATCGAAACTGGGCGAAGAGACACTCTCTTCGCCAGTAAC
TTAAACGCGGACGAAGCGCTGCCCCCTCCAACATTGACTGTGAGTGAGATGCTCGACACTCTCGCGGAAAAAGGCCTTGACATCGAAGAGAGCGTCGCCATCTTAG
GAGCTCACACATTG
GGCGTTGGGCACTGCCTGAATTTCATCAATCGCTTCGATCCCCAGGACAATGGCCCCCAGATGTCGCCCTTCTTCTCCACGGCGCTCAGGGTCTTGTGCCAATCACCCCCTTCGATGAGC
AATGCCACATTCGCGCCCAACGATCTCACCAATTTCATGTTTGACAACCAGTACTTCCGCGATCTGCAAGGCCAGCGCGGATTGCTCACCGTGGACGCGGAGCTCGCCATCGATCCACGC
ACCAAGAAGCATGTCGATCTCTTCGCGCTCAATCAGCTCCTCTTCTTCGCCAAATTCAGCGACGGCTTCGTCAAGCTCACCAGCTTCAATGTGCTCACGGGCAGCGATGGTGAGATTCGG
AGGGATTGCCGGGCTGTGAATCGAGAGCCCTAG

Retrieve as FASTA