Entry information : SmPrx79-1_15 (SmPrx79a_15)
Entry ID 7080
Creation 2009-10-22 (Paula Nunes)
Last sequence changes 2009-10-22 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx79-1_15 (SmPrx79a_15)
Name (synonym) SmPrx79-1_15 (SmPrx79a_15)
Class Class III peroxidase    [Orthogroup: Prx290]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx79-1_15
start..stop
S start..stop
SmPrx79-2_12 658 0 1..322 1..322
SmPrx36-2_44 368 1e-127 4..319 60..375
SmPrx36-1_2 368 2e-127 4..319 60..375
CmichPrx01 361 5e-125 1..319 37..361
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 590785..590976 192 N° 2 590537..590728 192 N° 3 590315..590480 166 N° 4 589844..590262 419
complement(join(589844..590262,590315..590480,590537..590728,590785..590976))


exon

Literature and cross-references SmPrx79-1_15 (SmPrx79a_15)
DNA ref. Phytozome 12:   scaffold_15 (590976..589844)
mRNA ref. JGI transcript:   94117 [Fragment]
Protein sequence: SmPrx79-1_15 (SmPrx79a_15)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (304)
PWM (Da):   %s   35317.17 (33454.2)  
PI (pH):   %s   9.77 (9.77) Peptide Signal:   %s   cut: 19 range:19-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKLFAITVMAALQCASLALSPDFYSESCPEARATVLGVLKKALKRDKRMAASLLRLHFHDCFVNGCDGSVLLDDFPGFTGEKTALPNANSLRGFEVVDEMKAALERNCPGVVSCADILALAAQLSVEMRGGPRWSVEVGRRDALSASRITANNDIPPPTSNVSTLVSLFQKQGLSVQDMVILSGSHTLGLARCTTFKPRIYNHTGTLRADPEFGRELLVRSRIHCPRFGHGNQTLALDYQSPHRFDNYYFRNLLARKALLNSDQVLTYQSPLTRALVTKYAYDQPTFFAHFAASMLRMGGIRPLTGAAGQVRRSCRAINRVR

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No ESTs. Incorrect prediction from JGI transcript.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCTCTTTGCGATTACTGTCATGGCTGCTTTGCAATGCGCTAGTCTTGCACTGAGCCCCGACTTCTATAGCGAGTCCTGCCCGGAAGCTCGGGCCACGGTCCTCGGTGTGTTGAAG
AAAGCCTTGAAGCGAGACAAGAGGATGGCGGCATCGTTGCTTCGTCTCCACTTCCACGACTGCTTCGTCAAC
GTAAGTAGTGTCCCTGGCATTGTGATGAATCATCCACACAACCTCTTG
TGCGGCAGGGCTGCGACGGCTCCGTGTTGCTGGATGACTTTCCGGGCTTCACTGGAGAGAAGACGGCACTCCCAAACGCAAACTCGCTGCGCGGATTCGAGGTTGTGGATGAGATGAAAG
CGGCGCTGGAGAGGAACTGCCCGGGCGTTGTGTCGTGCGCGGACATCCTCGCACTCGCTGCTCAGCTCTCCGTTGAGATG
GTAACTGTATAGCGTTGTTCTTCCAAGCTCACGGGTGGTA
AAAGCGATGGATGCAGAGGGGCGGGCCGAGATGGAGTGTGGAGGTGGGAAGAAGGGACGCGTTGAGCGCGAGCCGCATCACCGCAAACAACGACATCCCCCCGCCAACGTCCAACGTCTC
GACGCTGGTGTCCCTGTTCCAGAAGCAAGGGCTGTCGGTCCAAGACATGGTGATCCTCTCAG
GTTCGTGAGCCCTTCCAAGGTGTAACTTGTGACGACGCTCCCAGTCTGGCAGGTAGCC
ACACACTGGGGCTGGCACGCTGCACCACCTTCAAGCCCCGGATCTACAACCACACGGGAACGCTGCGTGCCGACCCCGAGTTCGGCAGGGAGCTGCTGGTACGCTCCCGAATCCACTGCC
CGCGCTTTGGCCACGGCAACCAGACGCTGGCGCTCGACTACCAGTCCCCGCATCGCTTCGACAACTACTACTTCCGCAACCTCCTGGCGCGCAAGGCCCTCCTCAACTCGGACCAGGTGC
TCACGTACCAGTCGCCGCTCACCCGCGCGCTCGTCACCAAGTACGCCTACGACCAGCCCACCTTCTTCGCGCATTTCGCCGCGTCCATGCTCCGGATGGGAGGCATCAGGCCGCTCACGG
GCGCCGCCGGGCAGGTCCGGCGGAGCTGCCGCGCGATCAACAGGGTGCGCTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCTCTTTGCGATTACTGTCATGGCTGCTTTGCAATGCGCTAGTCTTGCACTGAGCCCCGACTTCTATAGCGAGTCCTGCCCGGAAGCTCGGGCCACGGTCCTCGGTGTGTTGAAG
AAAGCCTTGAAGCGAGACAAGAGGATGGCGGCATCGTTGCTTCGTCTCCACTTCCACGACTGCTTCGTCAAC
GGCTGCGACGGCTCCGTGTTGCTGGATGACTTTCCGGGCTTCACTGGA
GAGAAGACGGCACTCCCAAACGCAAACTCGCTGCGCGGATTCGAGGTTGTGGATGAGATGAAAGCGGCGCTGGAGAGGAACTGCCCGGGCGTTGTGTCGTGCGCGGACATCCTCGCACTC
GCTGCTCAGCTCTCCGTTGAGATG
AGGGGCGGGCCGAGATGGAGTGTGGAGGTGGGAAGAAGGGACGCGTTGAGCGCGAGCCGCATCACCGCAAACAACGACATCCCCCCGCCAACGTCC
AACGTCTCGACGCTGGTGTCCCTGTTCCAGAAGCAAGGGCTGTCGGTCCAAGACATGGTGATCCTCTCAG
GTAGCCACACACTGGGGCTGGCACGCTGCACCACCTTCAAGCCCCGGATC
TACAACCACACGGGAACGCTGCGTGCCGACCCCGAGTTCGGCAGGGAGCTGCTGGTACGCTCCCGAATCCACTGCCCGCGCTTTGGCCACGGCAACCAGACGCTGGCGCTCGACTACCAG
TCCCCGCATCGCTTCGACAACTACTACTTCCGCAACCTCCTGGCGCGCAAGGCCCTCCTCAACTCGGACCAGGTGCTCACGTACCAGTCGCCGCTCACCCGCGCGCTCGTCACCAAGTAC
GCCTACGACCAGCCCACCTTCTTCGCGCATTTCGCCGCGTCCATGCTCCGGATGGGAGGCATCAGGCCGCTCACGGGCGCCGCCGGGCAGGTCCGGCGGAGCTGCCGCGCGATCAACAGG
GTGCGCTAG

Retrieve as FASTA