1. Browse the Database
  2. View Redoxidase
Entry information : SmPrx80-2_66 (SmPrx80b_66)
Entry ID 7082
Creation 2009-10-21 (Paula Nunes)
Last sequence changes 2009-10-21 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx80-2_66 (SmPrx80b_66)
Name (synonym) SmPrx80-2_66 (SmPrx80b_66)
Class Class III peroxidase    [Orthogroup: Prx025]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx80-2_66
start..stop		 S start..stop
SmPrx80-1_13 650 0 1..321 7..327
GbPrx49 389 3.18e-136 4..321 24..344
GbPrx29 385 4.22e-135 3..321 5..328
ApuncPrx29 385 7.77e-135 21..321 32..333
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7082' 'complement(join(483586..483995,484076..484241,484353..484547,484636..484830))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 484636..484830 193 N° 2 484353..484547 193 N° 3 484076..484241 164 N° 4 483586..483995 408
complement(join(483586..483995,484076..484241,484353..484547,484636..484830))


exon

Literature and cross-references SmPrx80-2_66 (SmPrx80b_66)
DNA ref. Phytozome 12:   scaffold_66 (484830..483586)
mRNA ref. JGI transcript:   122015
Protein sequence: SmPrx80-2_66 (SmPrx80b_66)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (301)
PWM (Da):   %s   34740.69 (32666.6) Transmb domain:   %s   i5-27o
PI (pH):   %s   9.64 (9.79) Peptide Signal:   %s   cut: 21 range:21-321
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDKTLLLLLVITVCVSSSSAQLSVGFYGRSCPRVESIVKRVALDK
FKQAPTSAAATVRLFFHDCFGCDASVTLASTPANRAEKDADINKSLAGDAFDSVMKAKKAVEAECPGVVSCADVLAILTRDFVGLTGGPAWQVKKGRRDGRISRAEAATANLPGAEFSVNQLLKNFATKGLNLVDLVSLSGAHTFGFAHCDQFSSRLYNFSSSNRMDPTMSSSFASDLKKSCPIRGGNPNLVEPFDPVTPFEFDNAYYKNLLAGRGLVTSDQELYSDRRTRKLVRLFSKKRQRFFNAFADAMDKMGSIGV
KTGTSGEIRRDCSRIN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAAAACATTGCTACTTTTGCTAGTGATTACAGTTTGCGTTTCCTCTTCCTCGGCCCAACTCTCGGTTGGCTTCTACGGCAGGAGCTGCCCGCGAGTGGAATCCATCGTCAAGCGA
GTAGCTCTCGACAAATTTAAGCAAGCACCAACATCTGCCGCTGCCACAGTCCGTCTCTTCTTCCACGACTGCTTCGTCGAGGCAAGTGGAGAGAAAAAAATCTAGTTTTTTTTCTCTCAT
CCCTGATAAACTTGTCCGGATTTCCATGAATTCCTCCATCCAGGGGGGTGTGATGCTTCCGTGACCTTAGCATCCACGCCGGCAAACAGAGCCGAGAAGGACGCGGACATCAACAAATCC
CTGGCCGGAGACGCATTTGATTCGGTGATGAAAGCCAAGAAAGCCGTGGAAGCCGAGTGCCCGGGAGTGGTCTCTTGCGCCGATGTTCTCGCCATACTAACGCGCGACTTTGTTGGCCTG
GTAAGCGAAACTTCCCTTCTTTAAAGCCTTTTGGAGGTCTTCCATTCATGCCCAAAGCTCCAAAACGAAAGGGGACTCAAAAACAAAATGCGTTTTTTTTATGTTGGTCAGACACTGGAG
GACCAGCATGGCAAGTGAAGAAAGGAAGACGCGACGGGAGAATCTCCAGAGCGGAAGCCGCCACTGCCAATCTCCCCGGCGCGGAATTCTCCGTAAACCAACTTCTCAAAAACTTTGCGA
CCAAGGGTCTCAATCTCGTCGACCTGGTGTCACTCTCAGGTATGCGCAGAAGTCACCAAAACATCAATCACTCACTTTTCTTCTTCCATGATCCAAACTACACAAACAAAAAACTCCAGG
AGAGCTCACACATTTGGCTTTGCACACTGCGATCAATTCAGCAGCCGGCTCTACAACTTCAGCAGCAGTAACAGGATGGATCCAACAATGAGCTCCAGCTTCGCGTCGGACCTCAAGAAA
TCGTGCCCCATCCGGGGCGGAAATCCAAACCTGGTGGAGCCGTTTGATCCAGTGACCCCTTTCGAGTTTGACAACGCGTACTACAAGAATCTGTTGGCGGGCAGAGGGTTGGTAACCTCG
GACCAGGAACTTTACTCGGACAGGCGGACCAGGAAGCTTGTCCGCTTGTTTTCAAAGAAGCGCCAGCGCTTCTTTAATGCGTTTGCTGACGCCATGGACAAAATGGGCAGCATCGGCGTC
AAAACAGGGACGAGCGGGGAAATCAGAAGGGATTGTAGCAGGATCAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATAAAACATTGCTACTTTTGCTAGTGATTACAGTTTGCGTTTCCTCTTCCTCGGCCCAACTCTCGGTTGGCTTCTACGGCAGGAGCTGCCCGCGAGTGGAATCCATCGTCAAGCGA
GTAGCTCTCGACAAATTTAAGCAAGCACCAACATCTGCCGCTGCCACAGTCCGTCTCTTCTTCCACGACTGCTTCGGGTGTGATGCTTCCGTGACCTTAGCATCCACGCCGGCAAACAGA
GCCGAGAAGGACGCGGACATCAACAAATCCCTGGCCGGAGACGCATTTGATTCGGTGATGAAAGCCAAGAAAGCCGTGGAAGCCGAGTGCCCGGGAGTGGTCTCTTGCGCCGATGTTCTC
GCCATACTAACGCGCGACTTTGTTGGCCTGACTGGAGGACCAGCATGGCAAGTGAAGAAAGGAAGACGCGACGGGAGAATCTCCAGAGCGGAAGCCGCCACTGCCAATCTCCCCGGCGCG
GAATTCTCCGTAAACCAACTTCTCAAAAACTTTGCGACCAAGGGTCTCAATCTCGTCGACCTGGTGTCACTCTCAGGAGCTCACACATTTGGCTTTGCACACTGCGATCAATTCAGCAGC
CGGCTCTACAACTTCAGCAGCAGTAACAGGATGGATCCAACAATGAGCTCCAGCTTCGCGTCGGACCTCAAGAAATCGTGCCCCATCCGGGGCGGAAATCCAAACCTGGTGGAGCCGTTT
GATCCAGTGACCCCTTTCGAGTTTGACAACGCGTACTACAAGAATCTGTTGGCGGGCAGAGGGTTGGTAACCTCGGACCAGGAACTTTACTCGGACAGGCGGACCAGGAAGCTTGTCCGC
TTGTTTTCAAAGAAGCGCCAGCGCTTCTTTAATGCGTTTGCTGACGCCATGGACAAAATGGGCAGCATCGGCGTCAAAACAGGGACGAGCGGGGAAATCAGAAGGGATTGTAGCAGGATC
AACTGA

Retrieve as FASTA