The peroxidases and oxidases database
Entry information : SmPrx61-2_18 (SmPrx61b_18)
Entry ID 7093
Creation 2009-10-22 (Paula Nunes)
Last sequence changes 2009-10-22 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx61-2_18 (SmPrx61b_18)
Name (synonym) SmPrx61-2_18 (SmPrx61b_18)
Class Class III peroxidase    [Orthogroup: Prx349]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx61-2_18
start..stop		 S start..stop
SmPrx61-1_19 625 0 1..347 18..357
SmPrx33-2_131 363 9e-126 30..343 42..342
SmPrx33-1_84 363 2e-125 30..343 42..342
CsaPrx64 347 2e-119 34..343 44..340
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 301360..301584 225 N° 2 301106..301297 192 N° 3 300113..300739 627  
complement(join(300113..300739,301106..301297,301360..301584))


exon

Literature and cross-references SmPrx61-2_18 (SmPrx61b_18)
DNA ref. Phytozome 12:   scaffold_18 (301584..300113)
mRNA ref. JGI transcript:   96952
Protein sequence: SmPrx61-2_18 (SmPrx61b_18)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   347 (339)
PWM (Da):   %s   37284.31 (36076.8)  
PI (pH):   %s   4.52 (6.50) Peptide Signal:   %s   cut: 26 range:26-364
Sequence 485
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPNYFFFRPPADDPAFAFQAPAWDDQGDGLASNYYAHSCPGVEEIARAVLEEAVGRDGRVGASLLRLHFHDCFVSGCDGSILLDATPELQSEKAATPNRNSARGFEVIDAIKAAVERECEGVVSCADLLAIAARDSVVLSGGHPWEVLLGRRDSLEPNFKGANTDIPAPNSTLSQLIAAFANKGLSTADMVTLSGSHTVGFSRCSSFTQRLYDHQRSGSPDPDLDPELLRHLQRLCPRGGDANAIAMLDVYSPARFDNSYFANLQLRRGVLSSDQALLTVLSPSSSSENLSEDSLVSGVLVEAYAYDESRFLEAFGEAMVKLGSIAPLTGDRGEVRRDCRVVNSDEQ*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCGAACTATTTCTTCTTCCGCCCTCCCGCGGATGATCCAGCATTCGCGTTCCAAGCGCCCGCATGGGACGATCAGGGTGATGGTCTCGCTTCAAATTACTACGCGCACTCTTGCCCT
GGCGTGGAAGAGATCGCACGCGCTGTTCTTGAGGAGGCGGTGGGACGTGATGGGCGTGTTGGAGCGTCCCTTCTTCGTCTCCATTTCCACGATTGTTTTGTTAGCGTAAAAAGCGAAACC
TTGCCTCTCTTTTATGAAAATCGTTTTGGTGTGTCTCTCTCTTCTAGGGCTGCGATGGATCCATTCTCTTGGACGCGACGCCGGAGCTCCAGAGCGAGAAGGCGGCCACTCCCAATCGCA
ACTCCGCCCGGGGATTCGAGGTCATCGACGCGATCAAGGCGGCCGTGGAGCGGGAGTGCGAGGGCGTGGTGTCGTGCGCGGATCTGCTGGCCATAGCCGCCCGGGATTCCGTTGTTCTGG
TATGGCTTAGTGTGGATCTCGAGTGCCTGTTTGCTCGGAATTCGTGGTTCATCGTTCTTTCTTCGTTTTCGAGTTCCTCCTTTTCATTTAGTGAACGTAGCTTGCATTCTCTCATTCTAT
TCTTCTTCCGAGCTTGCTTTTCATTGATTCTTTCGAGAGAAAGTGTCGAGCTTGTCTCATTTCATTTTTTTCCCGCCTATTGCATTGCAATCTGGGTGATCCATTCGATACAGAGATTCG
TGTTCTTATGTTACAACATGCAATGCAGCTTCCCATCCACCTGCATTGGCACTGGGAATGATTCGTCGGTGATCGTTCAAGTTTTCCTGCGATACTCTGATATAACTTTAAGTGTTCTTT
GACAGAGCGGAGGCCATCCCTGGGAAGTCCTCTTGGGCCGACGAGACAGCCTCGAGCCCAACTTCAAAGGCGCCAACACGGACATCCCTGCGCCAAACTCGACGCTCTCGCAGCTCATCG
CCGCCTTCGCCAACAAGGGCCTCTCCACCGCCGACATGGTCACCCTCTCCGGCTCCCACACCGTCGGTTTCTCCCGCTGCTCCAGCTTCACCCAGCGCCTCTACGACCACCAGAGGTCGG
GCTCCCCGGACCCCGACCTCGACCCGGAGCTCCTCCGCCACCTCCAGCGCCTCTGCCCGCGCGGCGGCGACGCGAACGCCATCGCCATGCTCGACGTCTACTCCCCGGCTCGCTTCGACA
ATAGCTACTTCGCCAACTTGCAGCTTCGCCGGGGGGTGTTGAGCTCGGACCAGGCTCTCCTTACGGTGCTGTCGCCCTCTTCTTCTTCCGAGAACTTGTCCGAGGACTCCCTCGTCAGTG
GGGTCCTGGTGGAAGCCTACGCGTACGACGAGTCGCGGTTCCTGGAGGCGTTTGGCGAAGCCATGGTCAAGCTGGGAAGCATCGCCCCGCTGACTGGCGATCGAGGCGAAGTCCGCCGGG
ATTGCCGCGTTGTCAACTCTGATGAGCAGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCGAACTATTTCTTCTTCCGCCCTCCCGCGGATGATCCAGCATTCGCGTTCCAAGCGCCCGCATGGGACGATCAGGGTGATGGTCTCGCTTCAAATTACTACGCGCACTCTTGCCCT
GGCGTGGAAGAGATCGCACGCGCTGTTCTTGAGGAGGCGGTGGGACGTGATGGGCGTGTTGGAGCGTCCCTTCTTCGTCTCCATTTCCACGATTGTTTTGTTAGCGGCTGCGATGGATCC
ATTCTCTTGGACGCGACGCCGGAGCTCCAGAGCGAGAAGGCGGCCACTCCCAATCGCAACTCCGCCCGGGGATTCGAGGTCATCGACGCGATCAAGGCGGCCGTGGAGCGGGAGTGCGAG
GGCGTGGTGTCGTGCGCGGATCTGCTGGCCATAGCCGCCCGGGATTCCGTTGTTCTGAGCGGAGGCCATCCCTGGGAAGTCCTCTTGGGCCGACGAGACAGCCTCGAGCCCAACTTCAAA
GGCGCCAACACGGACATCCCTGCGCCAAACTCGACGCTCTCGCAGCTCATCGCCGCCTTCGCCAACAAGGGCCTCTCCACCGCCGACATGGTCACCCTCTCCGGCTCCCACACCGTCGGT
TTCTCCCGCTGCTCCAGCTTCACCCAGCGCCTCTACGACCACCAGAGGTCGGGCTCCCCGGACCCCGACCTCGACCCGGAGCTCCTCCGCCACCTCCAGCGCCTCTGCCCGCGCGGCGGC
GACGCGAACGCCATCGCCATGCTCGACGTCTACTCCCCGGCTCGCTTCGACAATAGCTACTTCGCCAACTTGCAGCTTCGCCGGGGGGTGTTGAGCTCGGACCAGGCTCTCCTTACGGTG
CTGTCGCCCTCTTCTTCTTCCGAGAACTTGTCCGAGGACTCCCTCGTCAGTGGGGTCCTGGTGGAAGCCTACGCGTACGACGAGTCGCGGTTCCTGGAGGCGTTTGGCGAAGCCATGGTC
AAGCTGGGAAGCATCGCCCCGCTGACTGGCGATCGAGGCGAAGTCCGCCGGGATTGCCGCGTTGTCAACTCTGATGAGCAGTAG

Retrieve as FASTA