Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
359 |
PWM (Da): |
38788.15 |
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PI (pH):
| 9.13 |
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Sequence 432
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MCSIFLLFLESHPEKLVLVLGQEAKLLFTPSLPRERKITMQQFKYLAPLTSAALLLALTLLRRYAIHQESPTTPSELSTSFYANTCPNFPQIARSVIRFEVANDSRSSASILKLHFRDCFAQGCDGSLLPQVGKERGDGRSTKGLKIINNIKRAVETSCPETVSCADILALSARESVIALGGPSWTVEFGRRDNPSSASVAAAVDAIPSPNLTATQLIESFQKRGLSKRDLVALSGGHSIGQAQCSTFSARLFNGTAGDSIDPALKSRLEKTCPPTALNRLNNLDPSPTTFDNLYFRAVQANQSLLFSDQQLLQSDLAGFVKEFANNQKAFFTAFANAMIKIGKLSPLTGGHGEIRASC* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (introns 1 and 2). No EST. Incorrect prediction from JGI (short PS). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTGTTCTATTTTCTTGCTGTTTCTTGAAAGCCATCCAGAGAAGCTTGTTCTTGTTCTGGGCCAAGAGGCCAAGCTTCTCTTCACACCTTCACTCCCTCGTGAAAGAAAGATCACAATG CAGCAATTTAAATATCTAGCTCCACTCACCTCAGCAGCATTACTCCTCGCGTTAACGCTGCTGCGGCGCTATGCAATTCACCAGGAATCACCAACAACGCCCTCGGAGCTCTCCACTTCT TTCTACGCTAATACTTGTCCCAACTTCCCCCAGATCGCTAGAAGCGTGATTCGCTTTGAAGTTGCCAATGACAGCCGATCCTCTGCATCCATCCTCAAGCTCCACTTCCGCGATTGCTTT GCTCAAGTAAGTACTCTAATAATAAGTCCTCGTTTGTCATTTATTTGGCTGTCGCTCAGGGCTGTGACGGATCGCTGCTCCCCCAGGTCGGGAAGGAGCGAGGAGACGGACGCTCCACCA AGGGACTCAAAATCATCAACAATATCAAACGCGCCGTGGAGACCTCATGCCCGGAAACTGTATCATGCGCGGACATTCTTGCTCTGAGCGCCCGGGAATCCGTCATAGCCGTAAGTGAGG TCTCCATTGATTTGAGTTACAAATGCTTTCTTCTCTTTCGAAATTTGCAGCTTGGTGGCCCGTCATGGACAGTAGAGTTTGGCCGACGGGACAATCCCAGCTCCGCGAGCGTCGCTGCCG CGGTGGACGCCATTCCCAGCCCAAATCTCACCGCAACGCAGCTGATTGAGAGCTTCCAAAAGCGGGGCCTTTCCAAGCGTGATCTCGTAGCGCTCTCAGGAGGCCATTCCATCGGCCAGG CCCAGTGCTCCACATTTAGCGCCCGCCTCTTCAACGGAACCGCAGGGGATAGCATCGATCCGGCCCTCAAGTCCCGACTCGAGAAGACTTGCCCTCCAACAGCCCTAAACAGATTGAACA ATTTGGATCCCTCCCCCACCACGTTCGACAACTTATACTTTCGAGCCGTCCAAGCGAATCAGTCACTCCTCTTCTCAGACCAGCAGCTCTTGCAGAGTGATCTGGCGGGCTTTGTCAAGG AGTTTGCGAACAACCAGAAGGCATTTTTTACCGCCTTCGCCAATGCCATGATCAAAATTGGTAAGCTCTCGCCTCTCACGGGAGGACATGGTGAAATTCGAGCGTCGTGCTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTGTTCTATTTTCTTGCTGTTTCTTGAAAGCCATCCAGAGAAGCTTGTTCTTGTTCTGGGCCAAGAGGCCAAGCTTCTCTTCACACCTTCACTCCCTCGTGAAAGAAAGATCACAATG CAGCAATTTAAATATCTAGCTCCACTCACCTCAGCAGCATTACTCCTCGCGTTAACGCTGCTGCGGCGCTATGCAATTCACCAGGAATCACCAACAACGCCCTCGGAGCTCTCCACTTCT TTCTACGCTAATACTTGTCCCAACTTCCCCCAGATCGCTAGAAGCGTGATTCGCTTTGAAGTTGCCAATGACAGCCGATCCTCTGCATCCATCCTCAAGCTCCACTTCCGCGATTGCTTT GCTCAAGGCTGTGACGGATCGCTGCTCCCCCAGGTCGGGAAGGAGCGAGGAGACGGACGCTCCACCAAGGGACTCAAAATCATCAACAATATCAAACGCGCCGTGGAGACCTCATGCCCG GAAACTGTATCATGCGCGGACATTCTTGCTCTGAGCGCCCGGGAATCCGTCATAGCCCTTGGTGGCCCGTCATGGACAGTAGAGTTTGGCCGACGGGACAATCCCAGCTCCGCGAGCGTC GCTGCCGCGGTGGACGCCATTCCCAGCCCAAATCTCACCGCAACGCAGCTGATTGAGAGCTTCCAAAAGCGGGGCCTTTCCAAGCGTGATCTCGTAGCGCTCTCAGGAGGCCATTCCATC GGCCAGGCCCAGTGCTCCACATTTAGCGCCCGCCTCTTCAACGGAACCGCAGGGGATAGCATCGATCCGGCCCTCAAGTCCCGACTCGAGAAGACTTGCCCTCCAACAGCCCTAAACAGA TTGAACAATTTGGATCCCTCCCCCACCACGTTCGACAACTTATACTTTCGAGCCGTCCAAGCGAATCAGTCACTCCTCTTCTCAGACCAGCAGCTCTTGCAGAGTGATCTGGCGGGCTTT GTCAAGGAGTTTGCGAACAACCAGAAGGCATTTTTTACCGCCTTCGCCAATGCCATGATCAAAATTGGTAAGCTCTCGCCTCTCACGGGAGGACATGGTGAAATTCGAGCGTCGTGCTAG
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Retrieve as FASTA
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