Entry information : SmPrx89-1_24 (SmPrx89a_24)
Entry ID 7102
Creation 2009-10-22 (Paula Nunes)
Last sequence changes 2009-10-22 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx89-1_24 (SmPrx89a_24)
Name (synonym) SmPrx89-1_24 (SmPrx89a_24)
Class Class III peroxidase    [Orthogroup: Prx077]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx89-1_24
start..stop
S start..stop
SmPrx93-2_26 638 0 1..318 1..318
SmPrx107-1_48 635 0 1..318 1..318
SmPrx89-2_26 629 0 1..318 1..318
SmPrx92-1_24 628 0 1..318 1..318
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 293573..293776 204 N° 2 293838..294020 183 N° 3 294090..294659 570  
join(293573..293776,293838..294020,294090..294659)


exon

Literature and cross-references SmPrx89-1_24 (SmPrx89a_24)
DNA ref. Phytozome 12:   scaffold_24 (293573..294659)
mRNA ref. JGI transcript:   101258 [Incorrect prediction]
Protein sequence: SmPrx89-1_24 (SmPrx89a_24)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (298)
PWM (Da):   %s   33813.68 (31776.5)  
PI (pH):   %s   7.99 (7.98) Peptide Signal:   %s   cut: 21 range:21-318
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAIMSFVLVLLLALHGSALGQTLSSSFYRSSCPNLTTIVRAAVQQAVQAEARIAASFVRLHFHDCFVNGCDASILLDGANLEQNAFPNAGSARGFDIVDSIKSSVESSCPGVVSCADLLALIARDSVVALNGPSWTVVFGRRDSLTASQSAANANLPPPTLNASALIASFQNQGLSTTDMVALSGAHTIGQARCTTFKARLYGPFQRGDQMDQSFNTSLQSSCPSSNGDTNLSPLDVQTPTSFDNRYFRNLQNRRGLLFSDQTLFSGNQASTRNLVNSYASSQSTFFQDFGNAMVRMGNINVLTGSNGEIRRNCGRTN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2). No EST. Incorrect transcript prediction from JGI (short PS is missing: 3 aa).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGATCATGTCCTTTGTGCTTGTGTTGTTGCTGGCCCTGCATGGGAGTGCTCTTGGCCAAACTTTGAGCTCCAGCTTCTACCGCTCCTCGTGCCCAAATCTCACCACCATCGTGAGA
GCTGCAGTGCAGCAGGCCGTCCAGGCAGAGGCTCGAATCGCAGCCTCGTTTGTTCGCCTCCATTTCCACGACTGCTTTGTCAAT
GTAGAAAGCTTCCATAAGTTTCATTCAAGCATATTG
AAAGAACCATGCATTTGTCTTGCAGGGATGCGATGCTTCCATTCTTCTCGACGGCGCAAACCTGGAGCAAAACGCGTTTCCAAACGCTGGCTCCGCCCGTGGCTTCGACATCGTCGACTC
CATCAAGAGCTCCGTCGAGAGCTCCTGCCCGGGTGTTGTCTCCTGCGCTGACTTACTGGCGCTCATTGCCCGGGACTCCGTAGTCGCG
GTAAACTCTCAAAGTCAACTGTCAAAAGCTTA
CAATGTCCTCGCTTTTCGTTTTGTGGTGTTTTTACAGCTGAACGGGCCTTCGTGGACGGTGGTGTTTGGAAGGAGGGATAGCTTAACAGCAAGCCAATCTGCCGCAAATGCCAACCTTCC
TCCTCCAACTTTGAATGCCTCAGCGCTCATCGCGAGTTTCCAAAACCAGGGGCTTTCAACCACAGATATGGTGGCTCTCTCTGGGGCTCACACCATTGGGCAGGCCCGGTGCACCACCTT
TAAGGCTCGGCTCTACGGGCCCTTCCAAAGAGGTGACCAGATGGATCAAAGTTTTAACACCTCGTTGCAAAGCTCGTGCCCGAGCAGCAATGGCGACACCAATCTCTCGCCGCTCGACGT
CCAGACGCCCACGAGCTTTGACAACCGCTACTTTAGGAACTTGCAGAACCGGAGAGGGTTGCTTTTCTCGGACCAGACGCTCTTTTCCGGGAACCAGGCCAGCACGAGGAATCTCGTCAA
CTCATACGCTTCGAGCCAGAGCACTTTCTTCCAGGACTTTGGCAATGCAATGGTAAGGATGGGTAATATCAATGTGTTGACTGGATCCAATGGAGAGATTCGAAGAAACTGTGGAAGAAC
AAACTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGATCATGTCCTTTGTGCTTGTGTTGTTGCTGGCCCTGCATGGGAGTGCTCTTGGCCAAACTTTGAGCTCCAGCTTCTACCGCTCCTCGTGCCCAAATCTCACCACCATCGTGAGA
GCTGCAGTGCAGCAGGCCGTCCAGGCAGAGGCTCGAATCGCAGCCTCGTTTGTTCGCCTCCATTTCCACGACTGCTTTGTCAAT
GGATGCGATGCTTCCATTCTTCTCGACGGCGCAAAC
CTGGAGCAAAACGCGTTTCCAAACGCTGGCTCCGCCCGTGGCTTCGACATCGTCGACTCCATCAAGAGCTCCGTCGAGAGCTCCTGCCCGGGTGTTGTCTCCTGCGCTGACTTACTGGCG
CTCATTGCCCGGGACTCCGTAGTCGCG
CTGAACGGGCCTTCGTGGACGGTGGTGTTTGGAAGGAGGGATAGCTTAACAGCAAGCCAATCTGCCGCAAATGCCAACCTTCCTCCTCCAACT
TTGAATGCCTCAGCGCTCATCGCGAGTTTCCAAAACCAGGGGCTTTCAACCACAGATATGGTGGCTCTCTCTGGGGCTCACACCATTGGGCAGGCCCGGTGCACCACCTTTAAGGCTCGG
CTCTACGGGCCCTTCCAAAGAGGTGACCAGATGGATCAAAGTTTTAACACCTCGTTGCAAAGCTCGTGCCCGAGCAGCAATGGCGACACCAATCTCTCGCCGCTCGACGTCCAGACGCCC
ACGAGCTTTGACAACCGCTACTTTAGGAACTTGCAGAACCGGAGAGGGTTGCTTTTCTCGGACCAGACGCTCTTTTCCGGGAACCAGGCCAGCACGAGGAATCTCGTCAACTCATACGCT
TCGAGCCAGAGCACTTTCTTCCAGGACTTTGGCAATGCAATGGTAAGGATGGGTAATATCAATGTGTTGACTGGATCCAATGGAGAGATTCGAAGAAACTGTGGAAGAACAAACTAG

Retrieve as FASTA