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Entry information : SmPrx97-1_50 (SmPrx97a_50)
Entry ID 7113
Creation 2009-10-22 (Paula Nunes)
Last sequence changes 2009-10-22 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx97-1_50 (SmPrx97a_50)
Name (synonym) SmPrx97-1_50 (SmPrx97a_50)
Class Class III peroxidase    [Orthogroup: Prx356]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx97-1_50
start..stop		 S start..stop
SmPrx97-2_9 672 0 1..326 1..326
SmPrx36-2_44 348 1.67e-119 3..323 56..375
SmPrx36-1_2 348 1.69e-119 3..323 56..375
SmPrx50-2_101 340 3.29e-117 1..323 1..327
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7113' 'join(957769..957969,958041..958232,958293..958880)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 957769..957969 199 N° 2 958041..958232 190 N° 3 958293..958880 586  
join(957769..957969,958041..958232,958293..958880)


exon

Literature and cross-references SmPrx97-1_50 (SmPrx97a_50)
DNA ref. Phytozome 12:   scaffold_50 (957769..958880)
mRNA ref. JGI transcript:   114931
Protein sequence: SmPrx97-1_50 (SmPrx97a_50)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (307)
PWM (Da):   %s   35963.85 (33731.7)  
PI (pH):   %s   4.72 (4.85) Peptide Signal:   %s   cut: 20 range:20-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDRAFFLVLILAVIDWSLEEHLTPDFYQDSCPNLETTVRETVNKF
VQDEPGIAASLLRLHFHDCFVTGCDASILLDDVPPRLGEKSAPPNSNFFRAYEVIDDVKFQLEQICDGVVSCADLLALAAREAVIASHGPHWKVHYGRRDTTVASLAAAAQDIPFANATTQELITRFENKGLSVDEMVALSG
AHTIGQTRCAVVKDRLYDFMGTGQPDPALDKDLLQSLRESCPDTPSSDENFSPLDSQTPLRFDNAYFTDLRSGRGVLRSDQVLYSTPGATKSAVHIYSGDSSQFFEDFGRAMIKLGGLTP
LTGKEGEIRRSCRFPNRWI*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATCGAGCATTCTTCCTCGTTTTGATCCTGGCAGTGATTGATTGGAGCCTGGAAGAGCACCTCACTCCGGATTTCTACCAGGATTCCTGTCCCAATCTCGAGACCACAGTGCGAGAG
ACCGTAAATAAGTTCGTCCAGGACGAGCCAGGGATCGCAGCTTCACTCCTTCGCCTACATTTTCACGACTGCTTTGTCACGCGGTAAAGTTCGAAGGCAAATCTCACTAGTACCTTGAGT
TGATCGAAAAGACGGAGCGTAACTTCTTTTGCAGGGCTGCGATGCTTCAATCCTCCTGGACGACGTTCCTCCCAGGCTGGGCGAGAAGAGCGCTCCTCCAAACTCAAACTTTTTTCGAGC
TTACGAAGTCATCGACGACGTGAAGTTCCAACTGGAGCAAATCTGCGACGGCGTGGTTTCCTGCGCCGATCTCTTGGCTCTAGCTGCAAGAGAAGCCGTCATAGCGCGGTGAGCGAAAGG
AAAATGCCGAGATCAAATCTCTCACCACCATCTTTTCTTCTGTGATAGTCACACGGCCCTCACTGGAAAGTCCACTATGGCCGAAGAGACACCACGGTGGCGAGCTTGGCGGCCGCTGCG
CAGGACATACCTTTCGCCAACGCCACCACCCAAGAGCTCATCACAAGGTTTGAGAACAAAGGCCTGTCCGTGGACGAAATGGTAGCTCTCTCGGGAGCTCACACAATCGGCCAGACACGC
TGCGCGGTCGTCAAGGATCGCCTCTACGACTTCATGGGAACCGGACAGCCGGATCCAGCGCTGGACAAGGATTTGCTCCAATCCCTCCGTGAATCCTGCCCTGACACGCCCTCGAGCGAT
GAGAATTTCTCCCCTCTCGACTCCCAGACCCCTCTCCGATTCGACAATGCCTACTTCACGGACCTGAGGAGCGGCCGCGGCGTCCTCCGCTCGGATCAAGTGCTCTACTCCACGCCTGGC
GCCACCAAGAGCGCCGTCCATATCTACAGCGGCGATTCAAGCCAGTTCTTCGAGGATTTCGGGAGAGCGATGATCAAGCTAGGCGGATTGACGCCGCTAACAGGGAAGGAGGGCGAAATC
CGCCGCTCCTGTCGATTCCCAAACCGGTGGATCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATCGAGCATTCTTCCTCGTTTTGATCCTGGCAGTGATTGATTGGAGCCTGGAAGAGCACCTCACTCCGGATTTCTACCAGGATTCCTGTCCCAATCTCGAGACCACAGTGCGAGAG
ACCGTAAATAAGTTCGTCCAGGACGAGCCAGGGATCGCAGCTTCACTCCTTCGCCTACATTTTCACGACTGCTTTGTCACGGGCTGCGATGCTTCAATCCTCCTGGACGACGTTCCTCCC
AGGCTGGGCGAGAAGAGCGCTCCTCCAAACTCAAACTTTTTTCGAGCTTACGAAGTCATCGACGACGTGAAGTTCCAACTGGAGCAAATCTGCGACGGCGTGGTTTCCTGCGCCGATCTC
TTGGCTCTAGCTGCAAGAGAAGCCGTCATAGCGTCACACGGCCCTCACTGGAAAGTCCACTATGGCCGAAGAGACACCACGGTGGCGAGCTTGGCGGCCGCTGCGCAGGACATACCTTTC
GCCAACGCCACCACCCAAGAGCTCATCACAAGGTTTGAGAACAAAGGCCTGTCCGTGGACGAAATGGTAGCTCTCTCGGGAGCTCACACAATCGGCCAGACACGCTGCGCGGTCGTCAAG
GATCGCCTCTACGACTTCATGGGAACCGGACAGCCGGATCCAGCGCTGGACAAGGATTTGCTCCAATCCCTCCGTGAATCCTGCCCTGACACGCCCTCGAGCGATGAGAATTTCTCCCCT
CTCGACTCCCAGACCCCTCTCCGATTCGACAATGCCTACTTCACGGACCTGAGGAGCGGCCGCGGCGTCCTCCGCTCGGATCAAGTGCTCTACTCCACGCCTGGCGCCACCAAGAGCGCC
GTCCATATCTACAGCGGCGATTCAAGCCAGTTCTTCGAGGATTTCGGGAGAGCGATGATCAAGCTAGGCGGATTGACGCCGCTAACAGGGAAGGAGGGCGAAATCCGCCGCTCCTGTCGA
TTCCCAAACCGGTGGATCTGA

Retrieve as FASTA