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Entry information : SmPrx103-1_73 (SmPrx103a_73)
Entry ID 7118
Creation 2009-10-22 (Paula Nunes)
Last sequence changes 2009-10-22 (Paula Nunes)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx103-1_73 (SmPrx103a_73)
Name (synonym) SmPrx103-1_73 (SmPrx103a_73)
Class Class III peroxidase    [Orthogroup: Prx214]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx103-1_73
start..stop		 S start..stop
SmPrx103-2_90 647 0 1..326 1..325
SmPrx73-1_120 459 3.97e-164 26..325 25..324
SmPrx73-2_39 459 4.78e-164 26..325 25..324
MpPrx179 380 1.04e-132 10..323 11..328
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7118' 'join(189190..189402,189451..189642,189689..189854,189918..190327)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 189190..189402 211 N° 2 189451..189642 190 N° 3 189689..189854 164 N° 4 189918..190327 408
join(189190..189402,189451..189642,189689..189854,189918..190327)


exon

Literature and cross-references SmPrx103-1_73 (SmPrx103a_73)
DNA ref. Phytozome 12:   scaffold_73 (189190..190327)
mRNA ref. JGI transcript:   182303
EST ref. GenBank:   FE443000.1 [5' end]  FE442999.1 [3' end]
Protein sequence: SmPrx103-1_73 (SmPrx103a_73)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (302)
PWM (Da):   %s   34453.02 (31614.6) Transmb domain:   %s   i2-21o
PI (pH):   %s   7.64 (7.24) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTLVGFVLMSYVFFFFFFLSVGRCQLQTGFYASSCPNAESIVKSE
VSKATQQDSRLPASLIRLHFHDCFVQGCDASVLLDDTSSFTGEKTAGPNNNSLRGFEVIDTIKASLESSCKGVVSCADILAIAARDSSVITGGPSWDVRLGRRDSTTASLSGANSQIPSPAFTVNQLISAFTAKGLSAEDMFTLSG
AHTIGQAKCSSFSGRLFNNSGSGQPDPSIRPGFLKSLQSACPQGGDATALQPLDVATATTFDNQYYSNLLLGRGLLNSDQVLSTTVGTARNFVKAYSSDQSKFFSNFAGSMINMGNISPL
TTPNGIIRSNCRVPS

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 2 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTTGGTGGGATTCGTCCTCATGTCTTACGTCTTCTTCTTCTTCTTCTTCTTGTCCGTGGGGCGATGCCAGCTTCAAACGGGCTTCTATGCGTCTTCATGCCCAAACGCTGAATCC
ATAGTCAAGTCGGAGGTTTCCAAAGCGACGCAGCAGGACTCGAGATTGCCGGCGTCGTTGATAAGGCTCCATTTCCATGATTGCTTTGTTCAAAAGTGAGTGCCACTGATCAATTCGTTG
AATCAGTATTTTTTGTTCCTCAGGGGTGTGATGCATCGGTGCTGCTGGATGATACGTCGAGTTTTACCGGGGAGAAGACTGCCGGTCCAAACAACAATTCACTCCGAGGCTTCGAGGTCA
TCGACACGATCAAAGCGTCTCTGGAGAGCAGCTGCAAGGGAGTCGTGTCGTGCGCAGACATCCTCGCCATTGCGGCTCGTGATTCCAGTGTCATCTCGTAAGCGAATTTATCTCCGTATT
GGGATCAATATAAGCTTTTGCAGACGGGAGGACCTTCTTGGGATGTGAGGCTGGGGCGTCGAGACAGTACCACGGCCAGCCTGAGCGGAGCTAATTCACAGATTCCATCCCCTGCTTTCA
CCGTTAATCAGCTCATATCCGCATTCACGGCCAAAGGCCTGTCAGCGGAGGACATGTTCACCCTCTCAGAGGCAAGTGCAAGCTCATTAGAGTCGCATCAGGATCTTATGGAAACGGCAT
CTATGGATATGCAGGGGCTCACACAATCGGGCAGGCCAAGTGCAGCAGCTTCAGCGGCCGACTGTTCAACAACAGTGGCAGCGGGCAGCCGGACCCAAGCATCAGGCCGGGATTCTTGAA
GTCTCTTCAGTCGGCATGTCCTCAAGGGGGGGACGCCACCGCGCTACAGCCTCTGGACGTGGCAACCGCCACCACCTTTGACAACCAGTACTACTCCAACCTCCTCCTGGGCAGGGGCTT
GCTTAACTCGGACCAGGTCCTCTCTACCACCGTCGGGACTGCCAGGAACTTTGTCAAGGCCTACAGCTCCGACCAGTCCAAGTTCTTCAGCAACTTCGCGGGATCCATGATCAACATGGG
GAACATCAGCCCCCTCACCACGCCCAATGGAATCATCCGCTCAAACTGCCGGGTCCCCAGCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTTGGTGGGATTCGTCCTCATGTCTTACGTCTTCTTCTTCTTCTTCTTCTTGTCCGTGGGGCGATGCCAGCTTCAAACGGGCTTCTATGCGTCTTCATGCCCAAACGCTGAATCC
ATAGTCAAGTCGGAGGTTTCCAAAGCGACGCAGCAGGACTCGAGATTGCCGGCGTCGTTGATAAGGCTCCATTTCCATGATTGCTTTGTTCAAGGGTGTGATGCATCGGTGCTGCTGGAT
GATACGTCGAGTTTTACCGGGGAGAAGACTGCCGGTCCAAACAACAATTCACTCCGAGGCTTCGAGGTCATCGACACGATCAAAGCGTCTCTGGAGAGCAGCTGCAAGGGAGTCGTGTCG
TGCGCAGACATCCTCGCCATTGCGGCTCGTGATTCCAGTGTCATCACGGGAGGACCTTCTTGGGATGTGAGGCTGGGGCGTCGAGACAGTACCACGGCCAGCCTGAGCGGAGCTAATTCA
CAGATTCCATCCCCTGCTTTCACCGTTAATCAGCTCATATCCGCATTCACGGCCAAAGGCCTGTCAGCGGAGGACATGTTCACCCTCTCAGGGGCTCACACAATCGGGCAGGCCAAGTGC
AGCAGCTTCAGCGGCCGACTGTTCAACAACAGTGGCAGCGGGCAGCCGGACCCAAGCATCAGGCCGGGATTCTTGAAGTCTCTTCAGTCGGCATGTCCTCAAGGGGGGGACGCCACCGCG
CTACAGCCTCTGGACGTGGCAACCGCCACCACCTTTGACAACCAGTACTACTCCAACCTCCTCCTGGGCAGGGGCTTGCTTAACTCGGACCAGGTCCTCTCTACCACCGTCGGGACTGCC
AGGAACTTTGTCAAGGCCTACAGCTCCGACCAGTCCAAGTTCTTCAGCAACTTCGCGGGATCCATGATCAACATGGGGAACATCAGCCCCCTCACCACGCCCAATGGAATCATCCGCTCA
AACTGCCGGGTCCCCAGCTAG

Retrieve as FASTA