Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
324 (295) |
PWM (Da): |
34763.39 (31656.9) |
Transmb domain: |
i7-29o |
PI (pH):
| 7.32 (7.29) |
Peptide Signal:
| cut: 30 range:30-324 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MISISSNSFA AIAAMFSLLF IFSSMQCHAQ LSSTFYDRTC PNALNTIRTS VRQAVSRERR MAASLIRLHF HDCFVQGCDA SILLDETPTI VSEKTALPNL GSARGYGIIE DAKRELEKTC
PGIVSCADIL AVAARDASTL VGGPTWAVKL GRRDSTTASH TLAETDLPGP FDPLNRLISC FASKGLSTRD MVALSGAHSI GQAQCFLFRD RIYGNGTDID AGFASTRRRQ CPKEDQNGNL
APLDLVTPNQ LDNNYFKNLG QRKGLLQSDQ VLLSGGSTDD IVSEYSNSPR AFASDFAAAM IRMGDISPLT GQNGIIRTVC GSLN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic and 3 ESTs. Cultivar="Bright Yellow No.2" and "SNN". Uncorrect prediction (only exon 1 and start of exon 2 are found) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TGCTGCTATG TTTTCTCTTC TCTTTATAAT CTCCAGCATG CAATGCCATG CACAACTTTC TTCCACATTC TATGATCGCA CTTGCCCTAA TGCTCTCAAC ACCATTCGTA CAAGTGTTAG
ACAAGCAGTG TCACGTGAAC GTCGAATGGC TGCATCTCTT ATTCGCCTTC ATTTTCATGA TTGCTTTGTT CAGGTTGGTT ATACACACAT CAATTAGTAT GTTTCTCTAT TTACTTCAAG
TTAAAATTAT TAACATGATT ACATATTTAC TCACTTGTGG TTTTAACTAT AGGGTTGTGA TGCTTCTATC TTACTTGACG AAACCCCTAC AATTGTTAGT GAGAAGACTG CGTTGCCGAA
TCTTGGGTCA GCTAGAGGCT ATGGTATTAT AGAAGATGCC AAAAGAGAGC TTGAAAAAAC ATGTCCAGGA ATTGTATCAT GTGCAGACAT ACTTGCTGTT GCCGCTAGAG ATGCATCAAC
TCTCGTAAGT ATCCGTACTT TGATTTTCAT TTTCTTCACA TTATAATCAA ACCTCTCTAA CATGCATGTT TGTTCTGATA TTTTTTGGAA AACTTGGGTT TTGTAGTGAA TGGTTGTTAA
ATGCGGATGT TGTTTAAAGA AGTCTCACTA TATATCAAAC TAACTAACAT TATGTTAATA AATTACAATT AGGTTGGAGG TCCAACATGG GCAGTGAAAC TCGGAAGAAG AGATTCAACA
ACTGCAAGTC ATACACTTGC TGAAACTGAT CTCCCAGGTC CATTTGATCC TCTTAATAGG CTTATTTCTT GCTTTGCAAG CAAAGGCCTT AGCACAAGGG ATATGGTTGC TTTATCAGGT
AAAAACTA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CACAGAGCTA ATTTATAAGT TTTCTATTCT TAGTTCTTGA CATCATATCA CCAATACATT GCAATATTTT CGAAATGATT AGTATTTCAA GCAACTCTTT TGCAGCCATT GCTGCTATGT
TTTCTCTTCT CTTTATATTC TCCAGCATGC AATGCCATGC ACAACTTTCT TCCACATTCT ATGATCGCAC TTGCCCTAAT GCTCTCAACA CCATTCGTAC AAGTGTTAGA CAAGCAGTGT
CACGTGAACG TCGAATGGCT GCATCTCTTA TTCGCCTTCA TTTTCATGAT TGCTTTGTTC AGGGTTGTGA TGCTTCTATC TTACTTGACG AAACCCCTAC AATTGTTAGT GAGAAGACTG
CGTTGCCGAA TCTTGGGTCA GCTAGAGGCT ATGGTATTAT AGAAGATGCC AAAAGAGAGC TTGAAAAAAC ATGTCCAGGA ATTGTATCAT GTGCAGACAT ACTTGCTGTT GCCGCTAGAG
ATGCATCAAC TCTCGTTGGA GGTCCAACAT GGGCAGTGAA ACTCGGAAGA AGAGATTCAA CAACTGCAAG TCGTACACTT GCTGAAACTG ATCTCCCAGG TCCATTTGAT CCTCTTAATA
GGCTTATTTC TTGCTTTGCA AGCAAAGGCC TTAGCACAAG GGATATGGTT GCTTTATCAG GAGCACATTC AATTGGCCAA GCACAATGTT TCCTTTTTCG CGATAGGATT TATGGAAATG
GAACAGATAT TGATGCTGGA TTTGCTAGCA CAAGAAGACG TCAATGTCCT AAAGAAGACC AAAATGGAAA CCTAGCTCCA CTTGATTTGG TCACACCTAA TCAATTGGAT AACAATTATT
TCAAGAACTT GGGGCAAAGA AAAGGTCTTC TTCAATCAGA TCAAGTCCTT CTTAGTGGTG GATCTACTGA TGATATTGTT TCTGAATATA GTAACAGTCC TCGCGCATTT GCCTCTGATT
TTGCTGCTGC TATGATTAGA ATGGGAGATA TTAGTCCCCT AACTGGTCAA AATGGGATCA TAAGAACTGT CTGCGGCTCC CTAAATTGAT CATTCAAAAG CTTATTACAT GTATTTTGTA
TTTATTTGAT TCTTTAATTC TCTATGTAAT GTTTCAAGAA TGA
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Retrieve as FASTA
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