The peroxidases and oxidases database
Entry information : SmPrx106-2_43 (SmPrx106b_43)
Entry ID 7131
Creation 2009-11-17 (Christophe Dunand)
Last sequence changes 2014-05-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-05-23 (Christophe Dunand)
Peroxidase information: SmPrx106-2_43 (SmPrx106b_43)
Name (synonym) SmPrx106-2_43 (SmPrx106b_43)
Class Class III peroxidase    [Orthogroup: Prx230]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx106-2_43
start..stop		 S start..stop
SmPrx106-1_173 687 0 1..364 1..360
SmPrx15-1_0 400 4e-140 30..356 6..323
SmPrx15-2_60 399 6e-140 30..356 6..323
PtaPrx129 399 1e-139 58..358 34..330
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1646359..1646667 309 N° 2 1646724..1646915 192 N° 3 1647006..1647171 166 N° 4 1647240..1647643 404
N° 5 1647881..1647904 24  
join(1646359..1646667,1646724..1646915,1647006..1647171,1647240..1647643,1647881 ..1647904)


exon

Literature and cross-references SmPrx106-2_43 (SmPrx106b_43)
DNA ref. Phytozome 12:   scaffold_43 (1646028..1647904)
Protein sequence: SmPrx106-2_43 (SmPrx106b_43)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   364 (318)
PWM (Da):   %s   39592.64 (34565.1) Transmb domain:   %s   o20-42i
PI (pH):   %s   4.86 (4.59) Peptide Signal:   %s   cut: 47 range:47-364
Sequence 406
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVAPRSPPPPPPPPCFHCSFSFPSFSIAVFLFLAVLLLSICRSTSADDQQQQQQQELLVPGFYHSTCPQLQDIVQAGVEKAVENETRMAASLLRLHFHDCFVNGCDGSVLLDDTPTFTGEKNAVPNKNSIRGFEVIDQIKARLESECPGLVSCADIIAIAARDSVVLAGGPSWEVLLGRRDSLTASQAAANASIPSPALDVPALTKSFQNVGLTLQDMITLSGSHTIGQAHCFTFTQRLYNQSGNFQADPSMDSQFLLALKQLCPQGNPNPNTLASLDLSDPTVFNNHYFDNLMRGEGLLNSDQVLFTTTGITQEFVELFSKDQHAFFANFAISMVKMGNIKPLTGSEGEIRRDCRVIFLNASD*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns, extra intron 3'). No prediction from JGI. No ESTs. Prediction with FGENESH using protein similar prediction.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGCTCCTCGATCTCCTCCTCCTCCTCCTCCTCCTCCTTGCTTTCACTGTTCCTTCTCTTTTCCTTCCTTTTCGATCGCAGTGTTCTTGTTCCTGGCAGTGTTGCTTCTCTCGATT
TGCAGAAGCACTTCGGCAGATGATCAGCAGCAGCAGCAGCAGCAGGAGTTGCTCGTTCCCGGGTTTTACCACTCGACTTGTCCCCAGCTGCAAGACATTGTCCAAGCCGGCGTCGAGAAG
GCTGTGGAGAACGAGACGAGAATGGCGGCCTCCCTGTTAAGGCTCCACTTCCACGACTGCTTTGTTAACGTGAGTTTCATGCGTAGAAGTCTTCTCTTCTTCGTGAGCGAGCTTCGTTTC
TGCAGGGTTGTGATGGCTCGGTGCTGCTCGACGACACTCCCACTTTCACTGGCGAGAAGAATGCTGTCCCCAACAAAAACTCCATCCGAGGCTTCGAAGTGATCGACCAGATCAAAGCTC
GTCTGGAGAGTGAGTGCCCCGGACTAGTCTCCTGCGCTGATATCATCGCTATAGCTGCCAGAGACTCGGTAGTGCTGGTAAGTAGTCACCTAATCTACTTTCTCAAAAGCACCACCTAAG
TACCTGTTTCCACTCTTTAATCTTTCTTCCTTTTCTCGATCGTGTAGGCTGGAGGTCCTTCGTGGGAAGTTCTTCTCGGACGGAGAGATAGCTTGACAGCAAGCCAGGCAGCAGCGAATG
CGTCGATCCCTTCTCCAGCTTTGGACGTTCCGGCATTGACGAAATCCTTCCAAAACGTTGGCCTGACACTGCAAGACATGATCACACTCTCAGGTAAGTTCTCCACAACAAGAACAAAGA
AACAAAACTTAGAAGAGAAGCTTACCTTGATCACACTCCAGGCTCGCATACCATCGGCCAGGCTCACTGCTTCACGTTTACTCAGCGTCTCTACAACCAGAGTGGAAACTTTCAAGCCGA
TCCATCCATGGACTCGCAGTTCCTGCTGGCTCTGAAGCAGCTCTGTCCGCAAGGAAATCCAAATCCCAACACTCTGGCCAGCCTCGACTTGAGCGATCCCACCGTCTTCAACAATCACTA
CTTCGACAATCTCATGCGCGGAGAGGGCCTCCTCAACTCGGACCAAGTCCTCTTCACCACCACCGGGATCACGCAAGAGTTCGTGGAGCTCTTTAGCAAGGACCAACACGCCTTCTTCGC
GAACTTCGCCATCTCCATGGTGAAGATGGGCAACATCAAGCCTCTCACTGGCAGCGAAGGAGAGATCCGTAGAGACTGCCGAGTCGTGAATCCCAATCACGACATCTCTCCTTCTTCCCC
TGTTCCTGTTCCTCCAGAGACCGCGCTGCTACCGCCGCCACCACCGCCGCAAGAAACCGGTGATCTCGCCGCTCCACCCCCGCCGCAATTCCCCGAAGATCCTTCGTTCCAATTCCCTCC
TTTTCCACCGTTCCCGTTCTAAGCTAGCCAAGAACACTGTGTCGATAGTCAAATTCTTTCTTCTTGTGTGGAGTTGTGAAAGATTTTCCTCAATGCAAGCGATTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGCTCCTCGATCTCCTCCTCCTCCTCCTCCTCCTCCTTGCTTTCACTGTTCCTTCTCTTTTCCTTCCTTTTCGATCGCAGTGTTCTTGTTCCTGGCAGTGTTGCTTCTCTCGATT
TGCAGAAGCACTTCGGCAGATGATCAGCAGCAGCAGCAGCAGCAGGAGTTGCTCGTTCCCGGGTTTTACCACTCGACTTGTCCCCAGCTGCAAGACATTGTCCAAGCCGGCGTCGAGAAG
GCTGTGGAGAACGAGACGAGAATGGCGGCCTCCCTGTTAAGGCTCCACTTCCACGACTGCTTTGTTAACGGTTGTGATGGCTCGGTGCTGCTCGACGACACTCCCACTTTCACTGGCGAG
AAGAATGCTGTCCCCAACAAAAACTCCATCCGAGGCTTCGAAGTGATCGACCAGATCAAAGCTCGTCTGGAGAGTGAGTGCCCCGGACTAGTCTCCTGCGCTGATATCATCGCTATAGCT
GCCAGAGACTCGGTAGTGCTGGCTGGAGGTCCTTCGTGGGAAGTTCTTCTCGGACGGAGAGATAGCTTGACAGCAAGCCAGGCAGCAGCGAATGCGTCGATCCCTTCTCCAGCTTTGGAC
GTTCCGGCATTGACGAAATCCTTCCAAAACGTTGGCCTGACACTGCAAGACATGATCACACTCTCAGGCTCGCATACCATCGGCCAGGCTCACTGCTTCACGTTTACTCAGCGTCTCTAC
AACCAGAGTGGAAACTTTCAAGCCGATCCATCCATGGACTCGCAGTTCCTGCTGGCTCTGAAGCAGCTCTGTCCGCAAGGAAATCCAAATCCCAACACTCTGGCCAGCCTCGACTTGAGC
GATCCCACCGTCTTCAACAATCACTACTTCGACAATCTCATGCGCGGAGAGGGCCTCCTCAACTCGGACCAAGTCCTCTTCACCACCACCGGGATCACGCAAGAGTTCGTGGAGCTCTTT
AGCAAGGACCAACACGCCTTCTTCGCGAACTTCGCCATCTCCATGGTGAAGATGGGCAACATCAAGCCTCTCACTGGCAGCGAAGGAGAGATCCGTAGAGACTGCCGAGTCATTTTCCTC
AATGCAAGCGATTGA

Retrieve as FASTA