Entry information : SmPrx106-2_43 (SmPrx106b_43)
Entry ID 7131
Creation 2009-11-17 (Christophe Dunand)
Last sequence changes 2014-05-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-05-23 (Christophe Dunand)
Peroxidase information: SmPrx106-2_43 (SmPrx106b_43)
Name (synonym) SmPrx106-2_43 (SmPrx106b_43)
Class Class III peroxidase    [Orthogroup: Prx202]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx106-2_43
start..stop
S start..stop
SmPrx106-1_173 687 0 1..364 1..360
SmPrx15-1_0 400 4e-140 30..356 6..323
SmPrx15-2_60 399 5e-140 30..356 6..323
PtaPrx129 399 9e-140 58..358 34..330
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1646359..1646667 309 N° 2 1646724..1646915 192 N° 3 1647006..1647171 166 N° 4 1647240..1647643 404
N° 5 1647881..1647904 24  
join(1646359..1646667,1646724..1646915,1647006..1647171,1647240..1647643,1647881 ..1647904)


exon

Literature and cross-references SmPrx106-2_43 (SmPrx106b_43)
DNA ref. Phytozome 12:   scaffold_43 (1646028..1647904)
Protein sequence: SmPrx106-2_43 (SmPrx106b_43)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   365 (318)
PWM (Da):   %s   39592.64 (34565.1) Transmb domain:   %s   o20-42i
PI (pH):   %s   4.86 (4.59) Peptide Signal:   %s   cut: 47 range:47-364
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVAPRSPPPPPPPPCFHCSFSFPSFSIAVFLFLAVLLLSICRSTSADDQQQQQQQELLVPGFYHSTCPQLQDIVQAGVEKAVENETRMAASLLRLHFHDCFVNGCDGSVLLDDTPTFTGEKNAVPNKNSIRGFEVIDQIKARLESECPGLVSCADIIAIAARDSVVLAGGPSWEVLLGRRDSLTASQAAANASIPSPALDVPALTKSFQNVGLTLQDMITLSGSHTIGQAHCFTFTQRLYNQSGNFQADPSMDSQFLLALKQLCPQGNPNPNTLASLDLSDPTVFNNHYFDNLMRGEGLLNSDQVLFTTTGITQEFVELFSKDQHAFFANFAISMVKMGNIKPLTGSEGEIRRDCRVIFLNASD*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns, extra intron 3'). No prediction from JGI. No ESTs. Prediction with FGENESH using protein similar prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGCTCCTCGATCTCCTCCTCCTCCTCCTCCTCCTCCTTGCTTTCACTGTTCCTTCTCTTTTCCTTCCTTTTCGATCGCAGTGTTCTTGTTCCTGGCAGTGTTGCTTCTCTCGATT
TGCAGAAGCACTTCGGCAGATGATCAGCAGCAGCAGCAGCAGCAGGAGTTGCTCGTTCCCGGGTTTTACCACTCGACTTGTCCCCAGCTGCAAGACATTGTCCAAGCCGGCGTCGAGAAG
GCTGTGGAGAACGAGACGAGAATGGCGGCCTCCCTGTTAAGGCTCCACTTCCACGACTGCTTTGTTAAC
GTGAGTTTCATGCGTAGAAGTCTTCTCTTCTTCGTGAGCGAGCTTCGTTTC
TGCAGGGTTGTGATGGCTCGGTGCTGCTCGACGACACTCCCACTTTCACTGGCGAGAAGAATGCTGTCCCCAACAAAAACTCCATCCGAGGCTTCGAAGTGATCGACCAGATCAAAGCTC
GTCTGGAGAGTGAGTGCCCCGGACTAGTCTCCTGCGCTGATATCATCGCTATAGCTGCCAGAGACTCGGTAGTGCTG
GTAAGTAGTCACCTAATCTACTTTCTCAAAAGCACCACCTAAG
TACCTGTTTCCACTCTTTAATCTTTCTTCCTTTTCTCGATCGTGTAGGCTGGAGGTCCTTCGTGGGAAGTTCTTCTCGGACGGAGAGATAGCTTGACAGCAAGCCAGGCAGCAGCGAATG
CGTCGATCCCTTCTCCAGCTTTGGACGTTCCGGCATTGACGAAATCCTTCCAAAACGTTGGCCTGACACTGCAAGACATGATCACACTCTCAG
GTAAGTTCTCCACAACAAGAACAAAGA
AACAAAACTTAGAAGAGAAGCTTACCTTGATCACACTCCAGGCTCGCATACCATCGGCCAGGCTCACTGCTTCACGTTTACTCAGCGTCTCTACAACCAGAGTGGAAACTTTCAAGCCGA
TCCATCCATGGACTCGCAGTTCCTGCTGGCTCTGAAGCAGCTCTGTCCGCAAGGAAATCCAAATCCCAACACTCTGGCCAGCCTCGACTTGAGCGATCCCACCGTCTTCAACAATCACTA
CTTCGACAATCTCATGCGCGGAGAGGGCCTCCTCAACTCGGACCAAGTCCTCTTCACCACCACCGGGATCACGCAAGAGTTCGTGGAGCTCTTTAGCAAGGACCAACACGCCTTCTTCGC
GAACTTCGCCATCTCCATGGTGAAGATGGGCAACATCAAGCCTCTCACTGGCAGCGAAGGAGAGATCCGTAGAGACTGCCGAGTC
GTGAATCCCAATCACGACATCTCTCCTTCTTCCCC
TGTTCCTGTTCCTCCAGAGACCGCGCTGCTACCGCCGCCACCACCGCCGCAAGAAACCGGTGATCTCGCCGCTCCACCCCCGCCGCAATTCCCCGAAGATCCTTCGTTCCAATTCCCTCC
TTTTCCACCGTTCCCGTTCTAAGCTAGCCAAGAACACTGTGTCGATAGTCAAATTCTTTCTTCTTGTGTGGAGTTGTGAAAGATTTTCCTCAATGCAAGCGATTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGCTCCTCGATCTCCTCCTCCTCCTCCTCCTCCTCCTTGCTTTCACTGTTCCTTCTCTTTTCCTTCCTTTTCGATCGCAGTGTTCTTGTTCCTGGCAGTGTTGCTTCTCTCGATT
TGCAGAAGCACTTCGGCAGATGATCAGCAGCAGCAGCAGCAGCAGGAGTTGCTCGTTCCCGGGTTTTACCACTCGACTTGTCCCCAGCTGCAAGACATTGTCCAAGCCGGCGTCGAGAAG
GCTGTGGAGAACGAGACGAGAATGGCGGCCTCCCTGTTAAGGCTCCACTTCCACGACTGCTTTGTTAAC
GGTTGTGATGGCTCGGTGCTGCTCGACGACACTCCCACTTTCACTGGCGAG
AAGAATGCTGTCCCCAACAAAAACTCCATCCGAGGCTTCGAAGTGATCGACCAGATCAAAGCTCGTCTGGAGAGTGAGTGCCCCGGACTAGTCTCCTGCGCTGATATCATCGCTATAGCT
GCCAGAGACTCGGTAGTGCTG
GCTGGAGGTCCTTCGTGGGAAGTTCTTCTCGGACGGAGAGATAGCTTGACAGCAAGCCAGGCAGCAGCGAATGCGTCGATCCCTTCTCCAGCTTTGGAC
GTTCCGGCATTGACGAAATCCTTCCAAAACGTTGGCCTGACACTGCAAGACATGATCACACTCTCAG
GCTCGCATACCATCGGCCAGGCTCACTGCTTCACGTTTACTCAGCGTCTCTAC
AACCAGAGTGGAAACTTTCAAGCCGATCCATCCATGGACTCGCAGTTCCTGCTGGCTCTGAAGCAGCTCTGTCCGCAAGGAAATCCAAATCCCAACACTCTGGCCAGCCTCGACTTGAGC
GATCCCACCGTCTTCAACAATCACTACTTCGACAATCTCATGCGCGGAGAGGGCCTCCTCAACTCGGACCAAGTCCTCTTCACCACCACCGGGATCACGCAAGAGTTCGTGGAGCTCTTT
AGCAAGGACCAACACGCCTTCTTCGCGAACTTCGCCATCTCCATGGTGAAGATGGGCAACATCAAGCCTCTCACTGGCAGCGAAGGAGAGATCCGTAGAGACTGCCGAGTC
ATTTTCCTC
AATGCAAGCGATTGA

Retrieve as FASTA