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Entry information : OsiAPx-R
Entry ID 7156
Creation 2010-01-13 (Marcel Zamocky)
Last sequence changes 2011-05-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-05-03 (Christophe Dunand)
Peroxidase information: OsiAPx-R
Name OsiAPx-R
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa (indica cultivar-group)    [TaxId: 39946 ]
Cellular localisation Chloroplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsiAPx-R
start..stop		 S start..stop
OsAPx-R 676 0 1..331 1..331
ObrAPx-R 603 0 1..331 1..331
TaAPx-R01-1B 514 0 1..331 1..333
BdiAPx-R 508 0 1..331 1..329
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7156' 'complement(join(27660412..27660514,27660772..27660838,27661015..27661136,27661343..27661426,27661613..27661709,27661805..27661847,27661965..27662035,27662226..27662353,27662643..27662733,27662832..27662947,27663041..27663114))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 27663041..27663114 72 N° 2 27662832..27662947 114 N° 3 27662643..27662733 89 N° 4 27662226..27662353 126
N° 5 27661965..27662035 69 N° 6 27661805..27661847 41 N° 7 27661613..27661709 95 N° 8 27661343..27661426 82
N° 9 27661015..27661136 120 N° 10 27660772..27660838 65 N° 11 27660412..27660514 101  
complement(join(27660412..27660514,27660772..27660838,27661015..27661136,2766134 3..27661426,27661613..27661709,27661805..27661847,27661965..27662035,27662226..2 7662353,27662643..27662733,27662832..27662947,27663041..27663114))


exon

Literature and cross-references OsiAPx-R
Literature Yu J, Wang J, Lin W, Li H et al. "The genomes of Oryza sativa: a history of duplications" PLoS Biol. 3:266-281 (2005)
Protein ref. UniProtKB:   A2YX67
Protein sequence: OsiAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (325)
PWM (Da):   %s   35522.9 (35598.3)  
PI (pH):   %s   7.36 (9.32) Peptide Signal:   %s   cut: 28 range:28-352
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MELNNVPHIAASSRFFSSCSRCTCRIRRSGKTRIGASAAGRRCSSDDSACSE
/span>PSEQQNADFFGPISSLCYTRRDFASVALLPFILPHVHIARAAEPIDGSIIQNGVRNVLSKVKAAGMLRLAFHDAGTFDIADKGGMNGSIIYEVDRPENTGLNKSIK
VLGKAKEVIDLVQVSWADLIAVAGAESVALCGGPEIPVRLGRLDSSTADPAGKLPEETLDATALKTLFSKKGFSTQEMVVLSGAHTIGGKGFGNPNIFDNSYFKVLLEKPQPSSGMPAMV
GLRTDWALTEDDECLRWINLYAQDQANFFADFKDAYIKLVNTGASWRSA

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCTCAATAATGTCCCCCATATTGCAGCCTCCTCCCGCTTCTTCTCCAGCTGCAGTCGTTGCACCTGCAGGTAATGTTTGCATCTTCTCTCATGCTTTGATACCAACCGTGCCATC
ATTTGTTCATGGAAGGCACATGACCTGTGAAAATTGTGATGATACAGGAGATTAGAAGAAGTGGGAAGACGAGGATAGGAGCTTCTGCTGCTGGTCGTAGGTGCAGTAGTGATGATTCTG
CTTGTTCAGAACCCTCTGAGCAGCAAAATGCAGATTTCTTTTCAGGTATGAGTTGTTTCCATTGCAAGAACTGAGAGAATGCTTCCAGTGCCTACTGATATATTTCTGCCCAACTGAATT
TGCTTTGTGTATGGTGACCACAGGTGTCCCATATCTTCTCTTTGTTATACAAGGAGGGACTTTGCTTCTGTTGCTCTGCTCCCTTTCATACTTCCTCATGTTCATATAGCGAGGGCGTAA
GTGCAGTATTCAACCACAATCATATTCCTATTCTGCTCTAAGTTTCCATAGCTATGAGTTGCTAACCGTATTAATTTACATTTCTATGAGTATTTTTATTTATGTTTAATTGGTTCAATT
GTGGAAGCATGGCCTAGAATCAAAAGTCGAAATGAACCACAGGTCAATAAAGTATACCTACAATAGCTATTTGTGTATAAGAATAACCTACTCAAAGTAGTTTCATTCTCGTAAAACAGC
AGTATGACATCTTTTAGAGAAGTTTTTTTATGTTTGACTCTATAGGGGGCTGAGCCAATTGATGGTTCAATTATTCAAAACGGTGTGAGGAATGTTTTATCCAAGGTCAAGGCTGCTGGC
ATGCTTCGTTTGGCTTTCCATGATGCAGGGACTTTTGATATTGCTGATAAATCAGGTTCGATCTTTAATGTCTTCATTGGTTGAAGTTCTATATACAGTTTTAGAGCAAAAATTGAATGT
GTATAAAGTAGAATTATAGAGTATTGCAAACAAGAACAAACTATGAATAACTACACTTCAACCTATCTAAAGATGAATTCTGAGAAGTAAAACAGTAGATGGATATTTATGACAATATCT
TGCAGGTGTGGCATGAATGGATCTATAATTTATGAAGTTGATAGACCTGAAAATACTGGGCTAAATAAATCCATAAAGGTTTTTTTCCTCCTTTTTTTTCTTGCTTTTTATCATAAATAG
TAGTAACATATCCTTACTGAAGAACAACATGTTTTGACTTCCCATATCTGTTTTTAATGACTTATAACTGAACAGGTGTATTAGGAAAAGCGAAAGAAGTAATTGACCTTGTGCAGCAAG
GTACATGGTTTACACCCTTTTTATATGTTCTTTCTGTTTTGAGCTTCGGTTGTGATGTATCTTCAAGCACACATATACCGTTACTTTGCTAACAGTATATCATGGGCGGATTTGATTGCC
GTGGCTGGTGCTGAGTCAGTTGCGCTATGTGGAGGGCCAGAAATTCCAGTAAGACTAGGTCGATTAGATTCCAGGTGCAACATCACAGTGGTTTGTTCATTTAACAGTTCCCTTGCAATG
TTGGCAAAATTTTAGGCTGTTCATTTCCAGGCAGTGCTTCTATTTAGTATGCATCCATATTTTTTAAAGAACATGTAGGTATCCATATTTTCTCAAAGTAATATCCATATTCTTATGAAA
TAATGCATTTGACTCTGTAGTATACTGCTGATCCTGCTGGTAAACTTCCTGAAGAAACATTGGATGCCACTGCGCTGAAAACATTATTCAGCAAAAAGGGCTTTTCGTGAGTCCTCCTTT
TCTCTACTTACACAAACATCTTGTGAATTCAATTCCCATTGCCTATTTATGAAAATTTACTAATGCGTGGTTAAAAATTATGTATCTGTACATGATACGTATCTGCACATGATTTCCCCT
CTAGGCTTCTACAAAATGTTCCTGAAAACTTAGCATCCTTCCATGTCTGAAGTTAAACTTGATACTTGGCAGGAGACACAGGAGATGGTTGTGTTATCTGGAGCACACACAATTGGAGGT
AAAGGATTCGGGAATCCAAATATTTTCGACAACTCCTATTTTAAAGTACTCCTTGAGAAGCCACAGCCATCTTCATGTAAGTCCATTCATTTTTTCCATCATGCCCTTTAAATACTGTCA
TCATGAATCCATAAGCCATAACTGAATCTCAACTTAGCTCATGCCTTTGTAAATCATCCTTGTACAATGTACAATCGACTTGGCATTATTTGTAAATCACCTTAATACAATGTGTTGTGT
TCTTCTATGAAGCTCTGGCATGCCGGCAATGGTAGGACTGCGAACGGATTGGGCACTCACTGAAGATGATGAATGCTTAAGGTATTTTTTTTCTTGAACTAGATATGCTAAATAATGTCG
CTTACTTGTTACAAGCTCTGAAGAAGTACTAGGGATAATCATAAGCTTCCAAACTCCATGCACTAATCCTACTCTATCTTCAATTCTTTCAGTCAGGACCTAGGCTTTAGGTTTTAAGTC
ACAAATTTATAGGACAAATAGATATATTTGCAAGGTTCCTTCATGCTCACATGTTTGGTCAGGCCATTGACATTGGGCATATGCCAAACTACTTGCAGATATGGATCAATTTATATGCAC
AGGACCAAGCTAATTTTTTTGCCGACTTCAAGGATGCATACATCAAGCTTGTAAATACTGGAGCCTCATGGAGATCAGCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCTCAATAATGTCCCCCATATTGCAGCCTCCTCCCGCTTCTTCTCCAGCTGCAGTCGTTGCACCTGCAGGATTAGAAGAAGTGGGAAGACGAGGATAGGAGCTTCTGCTGCTGGT
CGTAGGTGCAGTAGTGATGATTCTGCTTGTTCAGAACCCTCTGAGCAGCAAAATGCAGATTTCTTTTCAGGTCCCATATCTTCTCTTTGTTATACAAGGAGGGACTTTGCTTCTGTTGCT
CTGCTCCCTTTCATACTTCCTCATGTTCATATAGCGAGGGCGGCTGAGCCAATTGATGGTTCAATTATTCAAAACGGTGTGAGGAATGTTTTATCCAAGGTCAAGGCTGCTGGCATGCTT
CGTTTGGCTTTCCATGATGCAGGGACTTTTGATATTGCTGATAAATCAGGTGGCATGAATGGATCTATAATTTATGAAGTTGATAGACCTGAAAATACTGGGCTAAATAAATCCATAAAG
GTATTAGGAAAAGCGAAAGAAGTAATTGACCTTGTGCAGCAAGTATCATGGGCGGATTTGATTGCCGTGGCTGGTGCTGAGTCAGTTGCGCTATGTGGAGGGCCAGAAATTCCAGTAAGA
CTAGGTCGATTAGATTCCAGTACTGCTGATCCTGCTGGTAAACTTCCTGAAGAAACATTGGATGCCACTGCGCTGAAAACATTATTCAGCAAAAAGGGCTTTTCGACACAGGAGATGGTT
GTGTTATCTGGAGCACACACAATTGGAGGTAAAGGATTCGGGAATCCAAATATTTTCGACAACTCCTATTTTAAAGTACTCCTTGAGAAGCCACAGCCATCTTCATCTGGCATGCCGGCA
ATGGTAGGACTGCGAACGGATTGGGCACTCACTGAAGATGATGAATGCTTAAGATGGATCAATTTATATGCACAGGACCAAGCTAATTTTTTTGCCGACTTCAAGGATGCATACATCAAG
CTTGTAAATACTGGAGCCTCATGGAGATCAGCTTAA

Retrieve as FASTA