Entry information : PdPrx03
Entry ID 7169
Creation 2010-01-26 (Cyril Jourda)
Last sequence changes 2010-01-26 (Cyril Jourda)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-01-28 (Christophe Dunand)
Peroxidase information: PdPrx03
Name PdPrx03
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Rosaceae Prunus
Organism Prunus dulcis (almond)    [TaxId: 3755 ]
Cellular localisation N/D
Tissue type Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PdPrx03
start..stop
S start..stop
PpePrx20 192 5e-63 1..92 234..325
PpePrx19 186 2e-60 1..92 235..326
MdPrx04 168 1e-55 1..92 69..159
CclPrx07 147 2e-45 1..92 233..323
Literature and cross-references PdPrx03
Literature REFERENCE 1. Santos A.M., Oliver M.J., Sanchez A.M., Payton P.R., Oliveira M.M. Adventitious shoot regeneration in Prunus dulcis: suppression subtractive hybridization and gene expression profiling toisolate stage specific genes. Unpublished.
Protein ref. GenPept:   ABR13314 [3' end] UniProtKB:   A7Y7N0 [3' end]
mRNA ref. GenBank:   EF640699 [3' end]
Protein sequence: PdPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   92
PWM (Da):   %s   9849.83  
PI (pH):   %s   8.47
Sequence
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Send to Peroxiscan
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GSGDNNLAPL DVQTPNTFDT AYFKNLINQK GLLHSDQILY NNGGSTDSLV KTYSGSANTF NSDFAKAMIK MGDNKPLTGS NGEIRLNCRR PN 

Retrieve as FASTA  
Remarks Partial sequence from mRNA sequence. Cultivar="Boa Costa". Sequence from leaves induced for adventitious regeneration.
DNA
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GGCTCAGGAG ACAACAACCT TGCACCTTTG GACGTCCAAA CTCCCAACAC TTTTGACACT GCTTACTTCA AGAACCTCAT CAACCAAAAG GGCCTCCTCC ACTCTGACCA AATTCTCTAC  AACAATGGTG GATCCACAGA TTCATTGGTT AAAACATACA GCGGCAGTGC CAATACCTTC AATTCTGACT TTGCCAAGGC AATGATCAAG ATGGGAGATA ATAAGCCACT CACTGGATCC  AACGGTGAGA TTAGATTGAA CTGTAGGAGG CCTAACTAGC TAGCTAAGCT AAGGAGGTAT TTTCTCTGTC ACAAGAATAA ACCAGAATTG GAGGTTCCAC CCAGAAGTTG GGAGAAATAT  TATTTTGTGT GTGATATAAG GTTATTGTTT GTTGAGTTGA GTGAGAATTT AATTAGCTGG TGTTTTTTAT TCTTCCAATG AATAAAAGCA TGTTTTTTAT TCCAAAAAAA AAAAAAAAAA 
AAAC 

Retrieve as FASTA