Entry information : PtaPrx78(PTA00009102)
Entry ID 7170
Creation 2010-01-26 (Cyril Jourda)
Last sequence changes 2010-01-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-06-02 (Christophe Dunand)
Peroxidase information: PtaPrx78(PTA00009102)
Name PtaPrx78(PTA00009102)
Class Class III peroxidase     [Orthogroup: Prx031]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx78
start..stop
S start..stop
PtaPrx148 642 0 1..332 1..332
PtaPrx146 642 0 1..332 1..333
PtaPrx147 641 0 1..332 1..332
PtaPrx149 635 0 1..332 1..334
Literature and cross-references PtaPrx78(PTA00009102)
Literature REFERENCE 1. Asante D.K., Yakovlev I.A., Fossdal C.G., Timmerhaus G., Partanen J., Johnsen O. Effect of bud burst forcing on transcript expression of selected genes in needles of Norway spruce during autumn. Plant Physiol. Biochem. 47:681-689(2009).

REFERENCE 2. akovlev I.A., Asante D.K.A., Fossdal C.G., Johnsen O., Partanen J., Junttila O. Analysis of gene expression during experimental initiation of bud burst in Norway spruce. Unpublished.
Protein sequence: PtaPrx78(PTA00009102)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332
PWM (Da):   %s   36165.45  
PI (pH):   %s   8.49
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MALAITQSSS MVLLLVIVSI CIVSESGRAN ALTGLSKDYY KRTCPSAETV IRDTIRNATE YDPKIPARIL RMHFHDCFIR GCDASVLLDS TTSNEAEKDA PPNVSLRAFY VLDDAKTKLE  SICPQTVSCA DILAIAARDV VVLTGGPKWD VLKGRKDGLI SRANDTRNLP APTFNVSQLI QSFALRGLSL HDLVALSGGH TLGFSHCSSF ESRLHNFNAT FKVDPTMEPQ FAQSLRTVCP 
QPNNNRSAGA FLDSTATQFD NAYFKHLVEG KGVFGSDQAL FLENPTKMIV KRFARDENGF FKAFQSSMVK LASVGVLNSG GEVRLNCRKV NS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, last exon is missing do to NN in sequence). tscaffold263 contains 5 other ORFs, position 24993-28719
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCTTG CAATTACACA GTCCTCCTCC ATGGTGCTGT TGCTAGTAAT TGTTTCTATC TGCATTGTCT CAGAATCAGG TCGGGCCAAT GCATTGACAG GGCTAAGCAA GGATTACTAC  AAGCGAACGT GCCCAAGTGC AGAGACTGTG ATAAGGGATA CCATACGGAA CGCCACTGAA TACGACCCTA AAATCCCTGC TCGCATTCTA CGAATGCATT TCCACGACTG CTTCATTAGG  GTATCTGCAT TATATTTTGA TATCATAGTT AACCAGTATA TAGTCATCTC TCGCAGCTAA ATCTAAAAGT TTTCAATGTT TTCTATCATA TTTAACGCTG GCGTGGCTCC CTCTAGTACT  TTATCAAAGT CCTGATTAGT TTAGAGCTTA GAATTAGAGT AGAATAGATT ATATTAGAAT TTGTATATTA ATATTAGAAT GCATAATCTA GAAAGATTCT ATAATTCTGG GCTGGGTACT  AAAGTGATCA GTAGAATTTT AAACTTTTCA ATGTTGTATA ATCTGTTTGC AACATCAATA AATGGAACAT AGTTTTGTTG GTTAATTGAT AGTTTTGTTT TGATTTTTTA ACCTAAATGG  CTAGGGTTGG GTATTGACAT TGGCGTTGGC GTAAATGAGT GCAGGGGTGC GATGCATCGG TGTTGTTAGA CTCTACTACA AGCAATGAAG CAGAGAAAGA CGCACCACCC AATGTTTCAC  TTCGCGCCTT CTATGTTTTA GACGATGCCA AGACGAAGCT GGAGTCCATT TGCCCACAAA CTGTTTCGTG CGCTGACATT CTTGCAATCG CTGCTAGAGA TGTTGTAGTT CTGGTATAGT  CTCCTCCCAG CAACTCTTGA TGATAGGGCA GACATGTAAT GTATGTATGA TTAATTAAAA TATTGATTTG ACAGACTGGG GGTCCAAAGT GGGACGTTCT CAAGGGAAGA AAAGACGGGC  TCATCTCGAG GGCAAATGAT ACCAGGAATT TGCCAGCCCC CACCTTCAAC GTTTCTCAGC TCATTCAAAG CTTTGCCCTC CGTGGACTAT CTCTCCATGA TCTTGTCGCT TTGTCAGGTA 

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