RedOxiBase: View Perox 7185

Entry information : GmRboh11 ( Glyma07g15690)

Entry ID	7185
Creation	2010-02-03 (Christophe Dunand)
Last sequence changes	2016-04-06 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2016-04-06 (Achraf Jemmat)

Peroxidase information: GmRboh11 ( Glyma07g15690)

Name (synonym)

GmRboh11 ( Glyma07g15690)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmRboh11 start..stop	S start..stop
GmRboh14	1494	0	1..859	1..860
CcajRboh08	1478	0	2..859	3..851
PvRboh09	1467	0	1..859	70..914
PauRboh08	1422	0	1..859	1..849

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..400	400	N° 2	708..873	166	N° 3	960..1008	49	N° 4	1119..1232	114
N° 5	1325..2137	813	N° 6	2418..2513	96	N° 7	2587..2702	116	N° 8	2794..2896	103
N° 9	3013..3110	98	N° 10	3182..3347	166	N° 11	3622..3762	141	N° 12	3854..3982	129
N° 13	4076..4154	79	N° 14	4250..4359	110
join(1..400,708..873,960..1008,1119..1232,1325..2137,2418..2513,2587..2702,2794. .2896,3013..3110,3182..3347,3622..3762,3854..3982,4076..4154,4250..4359)

Literature and cross-references GmRboh11 ( Glyma07g15690)

DNA ref.	GenBank: NC_016094.2 (15510046..15514404)
Cluster/Prediction ref.	Genebank: 100791701

Protein sequence: GmRboh11 ( Glyma07g15690)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	859
PWM (Da):	98016.89	Transmb domain:	o303-321i442-464o484-506i676-693o
PI (pH):	9.43

Sequence 1192
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSSQKGGKDESSTWILESIEIDPVVGRPKRDDEAPPNGSTVLKSPNDVAAVNNNNNNNNNNNNVRSRLGIRGSNGGRKMMRTESGAARGIKGLRFLDRTVTGRETDAWKSIEKRFTQNAVDGKLTKDKFGTCMGMGAESKDFAGELYEALARRRKVYAENGISLDEAKVFWEDMTNKDFESRLQVFFDMCDKNGDGKLSEDEVKVIVLSASANKLGNLKMHADGYASLIMEELDPDHNGYIEIWQLETLLKEMVSSEEGTKKLDQCRAMTLSKAMIPSKYRTPVSKFLSKTTEFALDKWKKIWVFALWLAINLVLFIWKFKQYREKKAFQVMGYCLCFAKGAAETLKFNMALIVLTMCRRTLTKLRGSFLSRIIPFDDNINFHKTIAVAVVIGTFIHVMMHITCDFPRLISCPENKFFSIFGDGFNYEQPTYYTLVKSIPGLTGILMVLIMAFTFTLATHYFRKSVVKLPSPLHRLAGFNAFWYAHHLLIVVYILLIIHGYFLFLTKEWNKKTTWMYLVVPLALYAFERIHPFFRSKDHRVSIIKAIIYTGNVLALYMTKPQGFKYESGMYLFVKCPDISTFEWHPFSITSAPGDDYLSVHIRTLGDWTTELKNTFAVCEPHNAQPRKGNLMRMETRAPNSTYNHPSKSRIRYPKILIKGPYGAPAQSYKNYDVLFLIGLGIGATPMISILKDMLNNMKSESPKDSVPSSNSDDQIKKGPERAYFYWVTREQSSFEWFKGVMDDIADYDCDNIIEMHNYLTSVYEEGDARSALIAMIQRLQHAKNGVDVVSESRIRTHFARPNWKKVFTELANAHQSSRIGVFYCGSPTLTKTLKELCHEFSLKSSTRFQFHKENF

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 7, 13 introns). No EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCATCACAAAAAGGAGGCAAAGATGAATCATCAACGTGGATTCTTGAGAGCATTGAGATTGATCCCGTTGTGGGAAGGCCTAAAAGGGATGATGAAGCACCCCCTAATGGAAGCACG
GTGCTTAAATCTCCCAATGATGTTGCTGCTGTGAACAACAACAACAACAACAACAACAACAACAACAATGTGAGGAGCAGACTTGGCATTCGGGGGAGTAATGGAGGGAGGAAAATGATG
AGGACTGAATCAGGAGCAGCCAGAGGGATTAAGGGTTTACGTTTTCTTGATAGAACGGTCACAGGGAGGGAAACTGATGCATGGAAGTCCATTGAGAAGCGCTTTACTCAGAATGCAGTT
GATGGAAAACTCACAAAAGACAAATTTGGAACCTGCATGGGTACAAACATTTGCCTCCTTTTTGTTTTTATTGGGAATGCATTTGGACAAAAACTTAGATTTTCCTAGGTGCTTTTTTGG
TGGTGTTTTCCTGTCAGAATTAGAGTTTCGCCTTAGTAATTCATGTTAATAAAGGTTTACATTAAAGATCAACGTAGATTGTCGAAATAAAACTCCAATTCTGATTGGAGAACAACGCCG
CAAAAGTGTCTATGGAACTGTATCCAAGTTTTGTCGTTTTGTGATATATTTAGTTTTCATAATTAGTGGTAAGTTTGAATGATGCAAATTGAAATTGTGTTCCACAGGCATGGGGGCAGA
ATCAAAGGATTTTGCTGGGGAGCTGTATGAGGCTTTGGCAAGGAGAAGGAAAGTCTATGCAGAAAATGGGATATCTTTGGATGAAGCTAAAGTATTCTGGGAGGACATGACCAACAAAGA
TTTTGAATCTAGGCTTCAAGTGTTCTTTGACATGTAAAGCGCACACACACTATCTGTATTCCTTTTGCATGTTGCATTCTTATTGAATGGATTGGCATAAATGAATCAGTTATTTTCAGG
TGTGACAAGAATGGAGATGGTAAGCTATCAGAAGATGAGGTTAAGGAGGTGAGTATTGAGACCACTTAAATTCTTCTGATTACCTTTTTTCTTTTCTTTTTTTTTCTCTCTCTCTTTCAT
TATATGGAAACAAAATTCTAAATGTCTTTGTTTAAAAGGTTATAGTGTTGAGCGCCTCAGCAAATAAGCTAGGAAACCTCAAAATGCATGCTGATGGGTATGCATCTTTGATAATGGAAG
AGCTTGACCCTGATCATAATGGATATATAGAGGTTAGAAGTGAACAAGTTCTTACTGCTTTCTTCTTTTATTGAATTTTACATAAACCTTCATCTTTAGTATTCTTAAATTTCTTTTTAA
ACAGATCTGGCAGCTAGAAACTCTGCTGAAGGAAATGGTTAGTTCTGAAGAAGGCACCAAAAAACTTGATCAATGTAGAGCCATGACTTTGAGTAAAGCTATGATACCGAGCAAGTATAG
GACACCAGTGAGCAAATTTCTATCTAAAACCACAGAATTTGCTCTCGATAAATGGAAAAAAATATGGGTTTTCGCGCTTTGGTTGGCCATAAACTTGGTGCTTTTTATTTGGAAATTTAA
GCAATACAGGGAAAAGAAAGCCTTTCAAGTCATGGGTTACTGTCTCTGCTTTGCAAAGGGTGCTGCTGAGACTCTCAAGTTCAACATGGCTCTTATTGTCCTAACCATGTGCAGAAGAAC
ACTTACAAAACTAAGAGGATCATTTCTAAGTCGAATCATACCTTTTGATGACAATATAAACTTTCACAAGACGATTGCGGTAGCTGTGGTTATAGGGACTTTTATTCATGTAATGATGCA
TATCACTTGTGATTTTCCAAGATTAATATCATGCCCAGAAAATAAGTTCTTTTCGATATTTGGGGATGGTTTTAACTATGAGCAGCCTACTTACTACACCCTAGTTAAAAGCATTCCTGG
TTTAACTGGAATTCTTATGGTCTTGATTATGGCTTTTACCTTCACTCTAGCGACACATTATTTCAGAAAAAGTGTTGTCAAGTTGCCTTCCCCGTTGCATCGATTGGCTGGTTTCAATGC
ATTTTGGTATGCTCATCATTTGCTTATTGTGGTTTACATACTCCTGATCATACATGGCTACTTTCTATTTCTCACCAAGGAATGGAACAAGAAGACGGTATGTGTAGCTCTAACACTTTT
CATCGCTCTAACTACCAACAAACCATACCTTCTAATTTCAATTTTCCAAAAGTTTTCTCTCAAAATGCAGTTACAACAGCTTTGCACTTTTAAACTGATATAAATTGTGGTTTATTTACG
TCTCATAACACATATAATTGAACTCTGTCCACCCTTCATTTGTTGATGTTGTACACTTGGTATTTTGACCTGATGGCTGATACTGCATGTCCAATTCTACATCATTGATTTGACATTAAT
ATCTTTGATTAATGCAGACTTGGATGTACCTTGTAGTTCCACTAGCACTCTATGCTTTTGAGAGAATTCACCCGTTTTTCAGGAGTAAAGATCACCGAGTAAGCATCATTAAGGTGTGTG
TCCACCACTTTTCCTTGATTCTTCAGGCTGGAGCACGGAAATGATTTTATCACTTGGAAATTTCAGGCAATAATATATACAGGAAATGTTCTGGCACTATACATGACCAAACCCCAAGGA
TTCAAGTATGAAAGTGGAATGTATCTTTTTGTCAAGTGTCCAGATATATCTACTTTTGAATGGTAACAACCATGACTCTTGGATGATAGTGATCAAAGAAAAAAGATTTTTTTTGCAAAA
TCACTTTTAGGATCAAATTGAATCTTGTTGCAGGCATCCTTTCTCCATCACCTCTGCACCTGGAGATGACTACTTGAGTGTTCATATACGAACCTTGGGAGATTGGACTACAGAGCTTAA
AAACACATTTGCACAGGTGATGTTAATGTCTGAACTGCGAACTCAATCAATCCTATGTATTTAGTAAGTCAAAGGTTCATATAAATATGGTAATTATTGAACATCTAGTTGTACTAATAC
TTAGAAATGCAGGTTTGTGAGCCTCACAATGCTCAACCAAGAAAGGGAAACCTTATGAGGATGGAAACTAGAGCACCAAATTCAACCTATAACCATCCTTCAAAATCAAGGTGAATAGCA
ACTCTTTGTTCTTAGCTTTACAAAATCATCTATAAATGTTGACATTATTTGGTCTTTCCAGAATTAGATATCCAAAGATCCTCATCAAAGGACCCTACGGAGCCCCAGCACAAAGCTATA
AGAACTATGATGTTCTCTTTCTCATAGGTCTCGGAATCGGTGCCACACCAATGATCAGTATTCTAAAAGATATGTTGAACAACATGAAGTCAGAAAGCCCTAAAGAGGTAAGTGGCAGGT
TATATATACTTTTTTTGGTTGGCAGCATATCTGTATTTGAGTTTATTAGGTATTGTCCATGTAGAAGTTTTCACATTGCCCATCAAGTAGAAATCATCTTTAGTATGACTTTCAAGTAAT
TATTTTAAAAGTCAATAATCTTAAATTCTGACGATTTGTGATTGGATGACAATGCAATTAGCTTATGTATTATTTATTGTTTGTAGTTTATACGCTAAGTTCCAATTCAAGGGGTTAACA
TAGCAGGGAACCTATATGCAGGACTCAGTCCCTAGCAGTAACTCAGATGATCAAATTAAGAAAGGTCCTGAAAGAGCATATTTCTATTGGGTAACAAGAGAGCAGTCATCATTTGAATGG
TTTAAAGGTGTCATGGATGATATTGCAGATTATGACTGCGATGTGAGACTAAGGACCAAACACTTCATTTTTTTTTCCTGGTTTTGTTCCTTCCATGTACAGTAAAAAATGTTAGCATGT
TTGAATGATGCAGAATATCATAGAAATGCACAACTATTTGACAAGTGTCTACGAGGAAGGTGATGCAAGGTCCGCGCTTATTGCCATGATTCAGAGGCTGCAACATGCTAAAAATGGAGT
TGATGTTGTTTCAGAAAGCCGGGTATTGATTGATTTACCACTCATTTAAACCAAAACCTTTTCACCATTCAACCAAATGTTAATCTTTTATTTTTTTTATCTTACCATATATCAGATTCG
AACACATTTTGCTAGACCAAACTGGAAAAAAGTCTTCACTGAATTAGCAAACGCGCATCAAAGCTCTCGGATAGGTATACAAAGTTGCGATGCTTTGTGTGAAATTCTAAAAAACAAAAA
AGTTAATAAAAGAAATGAAAAAATTTTATCTGCTATTTTCTTGATGCAGGTGTATTCTACTGTGGAAGTCCTACTCTTACAAAAACACTGAAGGAACTTTGTCACGAGTTCAGCCTAAAG
TCATCTACCCGTTTTCAGTTTCACAAGGAGAACTTCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA