1. Browse the Database
  2. View Redoxidase
Entry information : DferKat01
Entry ID 7258
Creation 2010-02-24 (Marcel Zamocky)
Last sequence changes 2015-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-03 (Achraf Jemmat)
Peroxidase information: DferKat01
Name DferKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Bacteria Bacteroidetes/Chlorobi Sphingobacteria Flexibacteraceae Dyadobacter
Organism Dyadobacter fermentans    [TaxId: 94254 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value DferKat01
start..stop		 S start..stop
PEspKat01 1152 0 14..730 23..739
CHpiKat01 1124 0 16..730 13..728
SpliKat01 983 0 17..724 11..713
PhepKat01 974 0 7..730 3..718
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7258' 'complement(join(6699553..6701745))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6699553..6701745 2191  
complement(join(6699553..6701745))


exon

Literature and cross-references DferKat01
Literature Lang E., et al. (2009). Complete genome sequence of Dyadobacter fermentans type strain (NS114T). Stand. Genomic Sci. 1:133-140(2009)
Protein ref. UniProtKB:   C6VVN3
DNA ref. GenBank:   CP001619.1 (6701745..6699553)
Protein sequence: DferKat01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   730 (321)
PWM (Da):   %s   81257.06 (33379.7)  
PI (pH):   %s   5.27 (5.09) Peptide Signal:   %s   cut: 30 range:30-350
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKRKAQQNP AVDQPENDKI RSLEPHMEDS TGELMNTNTG VRINDDQNSL KAGDRGASLL EDFILREKIT HFDHERIPER VVHARGSGAH GFFKLYEPLG QYTKAQFLND TSIETPVFVR  FSTVAGSRGS TDLARDVRGF AVKFYTQEGN FDLVGNNMPV FFIQDAIKFP DLVHAVKPEP DNEIPQAASA HDTFWDFISV MPESAHMIMW LMSDRAIPRS YRMMEGFGVH TFRLINAEGV  SHFVKFHWKP LLGVHAVAWD EAQNISGKDP DYHRRDLWDA IESGNFPEYE LGLQIVPEAD EFKFEFDLLD PTKIIPEELV PVIKVGKLTL NRNPENFFAE TEQSAFHIGH VVPGIDFTND  PLLQGRLFSY TDTQLIRLGG PNFQEIPINR PIVPVHNNQR DGYMRQTINR GKISYGPNSL GDNYPLQAKA SEGGFTSYPE RIDARKIRAR SKSFLDHFSQ ARLFFNSQSD PEKNHMIEAF  SFELGKVQSV EVRQRMLGIL SMVDKGLAAE VAFSLRLSVP EDPELPVNRS IPADGDPADY DPVMVEGSLA ASAALSMANS PKDSIKTRKI AFLAADGVDS NSLNTVKAAL EAEGAIVEVI  APRLNYVLST TDEEIHVHHS FLTAASVLYD AVFVPGGTNS VATVEADADA VHFLNEAFKH CKAIAADAGA MQVIEATYFA KKIPAEFSDE AVLLDGIVIS DDPATLARRF ITAIAQHRFW 
EREKPRKIPA 

Retrieve as FASTA  
Remarks strain="ATCC 700827 / DSM 18053 / NS114"
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGAAAA GAAAAGCACA ACAAAACCCG GCCGTCGATC AGCCGGAAAA CGACAAGATC CGGAGCCTCG AACCACACAT GGAGGACTCA ACGGGCGAAC TGATGAATAC CAACACGGGC  GTACGCATTA ACGACGACCA GAATTCCCTG AAAGCCGGCG ACCGCGGCGC GTCGCTGCTG GAAGATTTCA TCCTCCGCGA AAAAATAACG CATTTCGACC ACGAGCGTAT CCCTGAGCGT  GTCGTACACG CACGCGGATC GGGAGCGCAC GGGTTTTTTA AGCTCTACGA GCCGCTGGGG CAGTATACCA AAGCGCAATT CCTCAACGAC ACATCCATCG AAACGCCGGT GTTTGTCCGG  TTCTCGACCG TTGCCGGGTC ACGCGGGTCA ACCGATCTGG CCCGCGACGT GCGCGGTTTC GCCGTCAAGT TTTATACGCA GGAAGGCAAT TTTGACCTGG TAGGGAATAA TATGCCGGTG  TTTTTTATTC AAGACGCCAT TAAGTTCCCC GACCTGGTGC ACGCCGTTAA GCCAGAGCCG GACAATGAAA TCCCGCAGGC GGCATCGGCA CATGATACGT TTTGGGACTT CATATCGGTC  ATGCCGGAGT CGGCGCACAT GATCATGTGG CTTATGAGCG ACCGTGCCAT TCCGCGCAGC TACCGGATGA TGGAAGGGTT CGGGGTGCAC ACTTTCAGGC TGATCAATGC CGAAGGGGTA  AGCCATTTTG TAAAATTCCA CTGGAAACCC CTGCTGGGCG TGCATGCCGT AGCCTGGGAC GAGGCGCAGA ACATTTCGGG AAAAGATCCT GATTACCACC GGCGCGATCT TTGGGACGCG  ATCGAGAGCG GCAACTTTCC GGAATATGAG CTCGGTTTAC AGATCGTGCC CGAAGCAGAC GAGTTTAAAT TCGAATTCGA CCTGCTCGAC CCGACGAAGA TCATCCCCGA AGAGCTCGTA  CCGGTGATCA AGGTCGGAAA GCTCACGCTG AACCGCAATC CTGAGAACTT TTTTGCCGAA ACGGAGCAGT CGGCATTCCA CATCGGCCAC GTGGTACCAG GCATTGACTT CACCAATGAC  CCATTGCTGC AAGGCAGGCT GTTCTCCTAC ACCGACACCC AGCTGATCCG CCTCGGCGGC CCGAATTTCC AGGAGATACC CATTAACAGG CCGATTGTGC CGGTGCACAA CAACCAGCGC  GACGGCTATA TGCGCCAGAC GATCAATCGC GGCAAGATCA GCTACGGGCC TAATTCGCTG GGCGACAACT ACCCGTTGCA AGCCAAGGCG TCGGAAGGCG GGTTTACCTC CTACCCCGAA  AGGATCGATG CCCGCAAGAT CAGGGCGCGA AGCAAGAGCT TCCTGGATCA TTTCAGCCAG GCCAGGTTGT TTTTCAACAG CCAGTCGGAC CCTGAGAAAA ACCATATGAT CGAGGCGTTC  AGCTTTGAAT TGGGCAAGGT ACAATCGGTG GAAGTACGTC AGCGGATGCT GGGCATTCTG TCGATGGTGG ATAAGGGACT GGCCGCCGAA GTGGCATTCT CGTTGCGTCT GTCCGTACCG  GAAGACCCCG AGTTGCCTGT AAACCGCAGC ATTCCCGCAG ACGGCGATCC GGCCGATTAC GACCCCGTAA TGGTGGAAGG CTCGCTCGCG GCCTCGGCTG CGCTGAGCAT GGCCAACAGC  CCGAAAGACT CCATCAAGAC GAGGAAAATC GCATTCCTGG CTGCCGATGG CGTGGATAGC AATTCACTCA ATACCGTAAA AGCCGCGCTG GAAGCGGAAG GCGCCATCGT TGAAGTGATT  GCCCCGAGGC TCAACTATGT ATTGTCCACC ACCGACGAGG AAATCCATGT GCATCACAGT TTCCTCACGG CCGCATCGGT ATTATACGAC GCCGTGTTTG TACCAGGCGG CACCAACAGC  GTGGCTACCG TGGAGGCGGA TGCCGACGCC GTTCATTTCC TGAATGAGGC GTTCAAGCAT TGCAAAGCCA TTGCAGCGGA CGCCGGAGCG ATGCAGGTGA TCGAGGCGAC CTATTTTGCC  AAAAAGATCC CCGCCGAGTT CTCGGACGAA GCGGTACTGC TGGACGGCAT CGTGATCAGC GACGATCCGG CGACACTGGC AAGGCGGTTC ATTACCGCCA TAGCGCAACA CAGGTTCTGG 
GAAAGAGAAA AGCCGAGAAA GATCCCGGCG TAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGAAAA GAAAAGCACA ACAAAACCCG GCCGTCGATC AGCCGGAAAA CGACAAGATC CGGAGCCTCG AACCACACAT GGAGGACTCA ACGGGCGAAC TGATGAATAC CAACACGGGC  GTACGCATTA ACGACGACCA GAATTCCCTG AAAGCCGGCG ACCGCGGCGC GTCGCTGCTG GAAGATTTCA TCCTCCGCGA AAAAATAACG CATTTCGACC ACGAGCGTAT CCCTGAGCGT  GTCGTACACG CACGCGGATC GGGAGCGCAC GGGTTTTTTA AGCTCTACGA GCCGCTGGGG CAGTATACCA AAGCGCAATT CCTCAACGAC ACATCCATCG AAACGCCGGT GTTTGTCCGG  TTCTCGACCG TTGCCGGGTC ACGCGGGTCA ACCGATCTGG CCCGCGACGT GCGCGGTTTC GCCGTCAAGT TTTATACGCA GGAAGGCAAT TTTGACCTGG TAGGGAATAA TATGCCGGTG  TTTTTTATTC AAGACGCCAT TAAGTTCCCC GACCTGGTGC ACGCCGTTAA GCCAGAGCCG GACAATGAAA TCCCGCAGGC GGCATCGGCA CATGATACGT TTTGGGACTT CATATCGGTC  ATGCCGGAGT CGGCGCACAT GATCATGTGG CTTATGAGCG ACCGTGCCAT TCCGCGCAGC TACCGGATGA TGGAAGGGTT CGGGGTGCAC ACTTTCAGGC TGATCAATGC CGAAGGGGTA  AGCCATTTTG TAAAATTCCA CTGGAAACCC CTGCTGGGCG TGCATGCCGT AGCCTGGGAC GAGGCGCAGA ACATTTCGGG AAAAGATCCT GATTACCACC GGCGCGATCT TTGGGACGCG  ATCGAGAGCG GCAACTTTCC GGAATATGAG CTCGGTTTAC AGATCGTGCC CGAAGCAGAC GAGTTTAAAT TCGAATTCGA CCTGCTCGAC CCGACGAAGA TCATCCCCGA AGAGCTCGTA  CCGGTGATCA AGGTCGGAAA GCTCACGCTG AACCGCAATC CTGAGAACTT TTTTGCCGAA ACGGAGCAGT CGGCATTCCA CATCGGCCAC GTGGTACCAG GCATTGACTT CACCAATGAC  CCATTGCTGC AAGGCAGGCT GTTCTCCTAC ACCGACACCC AGCTGATCCG CCTCGGCGGC CCGAATTTCC AGGAGATACC CATTAACAGG CCGATTGTGC CGGTGCACAA CAACCAGCGC  GACGGCTATA TGCGCCAGAC GATCAATCGC GGCAAGATCA GCTACGGGCC TAATTCGCTG GGCGACAACT ACCCGTTGCA AGCCAAGGCG TCGGAAGGCG GGTTTACCTC CTACCCCGAA  AGGATCGATG CCCGCAAGAT CAGGGCGCGA AGCAAGAGCT TCCTGGATCA TTTCAGCCAG GCCAGGTTGT TTTTCAACAG CCAGTCGGAC CCTGAGAAAA ACCATATGAT CGAGGCGTTC  AGCTTTGAAT TGGGCAAGGT ACAATCGGTG GAAGTACGTC AGCGGATGCT GGGCATTCTG TCGATGGTGG ATAAGGGACT GGCCGCCGAA GTGGCATTCT CGTTGCGTCT GTCCGTACCG  GAAGACCCCG AGTTGCCTGT AAACCGCAGC ATTCCCGCAG ACGGCGATCC GGCCGATTAC GACCCCGTAA TGGTGGAAGG CTCGCTCGCG GCCTCGGCTG CGCTGAGCAT GGCCAACAGC  CCGAAAGACT CCATCAAGAC GAGGAAAATC GCATTCCTGG CTGCCGATGG CGTGGATAGC AATTCACTCA ATACCGTAAA AGCCGCGCTG GAAGCGGAAG GCGCCATCGT TGAAGTGATT  GCCCCGAGGC TCAACTATGT ATTGTCCACC ACCGACGAGG AAATCCATGT GCATCACAGT TTCCTCACGG CCGCATCGGT ATTATACGAC GCCGTGTTTG TACCAGGCGG CACCAACAGC  GTGGCTACCG TGGAGGCGGA TGCCGACGCC GTTCATTTCC TGAATGAGGC GTTCAAGCAT TGCAAAGCCA TTGCAGCGGA CGCCGGAGCG ATGCAGGTGA TCGAGGCGAC CTATTTTGCC  AAAAAGATCC CCGCCGAGTT CTCGGACGAA GCGGTACTGC TGGACGGCAT CGTGATCAGC GACGATCCGG CGACACTGGC AAGGCGGTTC ATTACCGCCA TAGCGCAACA CAGGTTCTGG 
GAAAGAGAAA AGCCGAGAAA GATCCCGGCG TAA 

Retrieve as FASTA