Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
351 |
PWM (Da): |
38240.56 |
Transmb domain: |
i21-43o |
PI (pH):
| 9.1 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MCVKKSTKEK KKKNLLLRIR NKMATLGYLC PLILMCILGL LGSNDAQLQP NFYAKSCPKA EKTIQDYVQN HIPNAPSLAA ALIRMHFHDC FVRGCDASVL LNSTSSTGSQ TEKVAIPNQT
LRGFDFIDAV KKVVEAECPG VVSCADIVAL VTRDSVVVTG GPYWNVPTGR RDGRISDASE TTDIPAPFNN LSSLQSSFAK KGLDLKDLVL LSGAHTIGIS HCSSFSTRLY NFTGTFGTQD
PSLDSEYAAN LKAKKCKSLN DNTTKVEMDP GSIRTFDLSY YKLLLKRRGL FQSDAALTTS TTTKSYVNQL VEGSLKEFYT EFAQAMEKMG RIEVKTGSAG EIRKHCAAVN S
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns) and 1 EST. Cultivar="Hicks Broadleaf". Uncorrect prediction from SGN ( PS is missing) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTACAT TAGGCTATTT GTGTCCTTTA ATATTGATGT GTATTCTAGG GCTCCTAGGA TCAAACGATG CTCAATTGCA ACCAAACTTT TATGCAAAGA GCTGTCCAAA AGCAGAGAAG
ACTATTCAAG ACTATGTCCA GAATCACATT CCAAATGCTC CATCTCTTGC TGCTGCCTTA ATTAGAATGC ATTTCCATGA TTGCTTTGTC AGGGTAATTA TTAATTACTA TATATGTCTT
GTTATGTTTC ACTTGAATAT ATCATTTGAC AATTGCATAG TAGTTATGCT TATTTTGATC TTTTCTCCTT TTTTGGGTGG CGTTAATTTG CGATTTTGCA GGGTTGTGAT GCTTCAGTGC
TCCTGAATTC AACATCAAGT ACAGGAAGCC AGACCGAAAA AGTGGCAATC CCTAATCAAA CACTGAGAGG CTTTGATTTC ATTGATGCTG TGAAGAAAGT AGTTGAAGCT GAATGTCCTG
GAGTAGTCTC TTGTGCTGAT ATCGTTGCAT TGGTTACTAG AGACTCTGTT GTGGTCACTG TAAGCCAAGA ACTTGAACTA TCTAATTCCC AACCTCTTCC TAACCATTTA GGATATTTAC
ACAAATATAC ATTTGAATTC ATTGTTTACT TTGCCTAGCC ATTTTATATA GATTAATACT TCTAACCATT CATTTTCAAT TAATTATTAT GACCATCTTC TTCTTGGGCA TGATAGGGAG
GCCCTTATTG GAATGTGCCA ACTGGGAGAA GAGATGGAAG AATCTCTGAC GCTTCTGAAA CCACAGATAT TCCAGCTCCA TTCAATAACT TATCTAGTCT CCAGTCTTCT TTTGCTAAGA
AGGGCCTTGA CCTCAAAGAC TTGGTTCTAT TATCAGGTAA GCCAAAACTA ATTCAAATAC TTATCACTTC TTCTTGTTAT CCCCTGACTG TCTGCCAAGT GAGGTAATTA ATTAAGTGTA
TCGATGCTGC TTATGCAAAA TCCTGTGTCG CCACTGTATA GGTGTTAACA AATTTTCATG GACAATATAT AATTCTTTCA GGTGCTCACA CCATTGGAAT CTCTCATTGC TCATCATTTT
CAACACGTTT ATATAATTTC ACTGGAACTT TTGGTACTCA AGATCCATCT CTAGACAGTG AATATGCAGC TAACCTTAAG GCCAAAAAAT GTAAATCACT CAATGATAAC ACAACAAAAG
TTGAGATGGA CCCGGGGAGT ATCAGGACAT TTGATCTTAG CTATTACAAG CTTCTACTCA AAAGGAGAGG ACTCTTTCAA TCTGATGCTG CCTTGACAAC AAGTACTACA ACAAAGTCAT
ACGTCAACCA ACTCGTCGAG GGATCACTCA AAGAGTTCTA TACTGAATTT GCTCAGGCAA TGGAGAAAAT GGGAAGAATT GAAGTTAAGA CAGGCTCTGC TGGTGAAATT AGGAAGCACT
GTGCGGCTGT GAATAGTTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGATGTGTGT CAAGAAATCA ACAAAGGAAA AAAAAAAAAA AAATCTCCTT TTGAGGATTA GAAACAAAAT GGCTACATTA GGCTATTTGT GTCCTTTAAT ATTGATGTGT ATTCTAGGGC
TCCTAGGATC AAACGATGCT CAATTGCAAC CAAACTTTTA TGCAAAGAGC TGTCCAAAAG CAGAGAAGAC TATTCAAGAC TATGTCCAGA ATCACATTCC AAATGCTCCA TCTCTTGCTG
CTGCCTTAAT TAGAATGCAT TTCCATGATT GCTTTGTCAG GGGTTGTGAT GCTTCAGTGC TCCTGAATTC AACATCAAGT ACAGGAAGCC AGACCGAAAA AGTGGCAATC CCTAATCAAA
CACTGAGAGG CTTTGATTTC ATTGATGCTG TGAAGAAAGT AGTTGAAGCT GAATGTCCTG GAGTAGTCTC TTGTGCTGAT ATCGTTGCAT TGGTTACTAG AGACTCTGTT GT
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Retrieve as FASTA
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