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Entry information : GfoKat01
Entry ID 7261
Creation 2010-02-25 (Marcel Zamocky)
Last sequence changes 2015-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-03 (Achraf Jemmat)
Peroxidase information: GfoKat01
Name GfoKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Bacteria Bacteroidetes/Chlorobi Flavobacteria Flavobacteriaceae Gramella
Organism Gramella forsetii    [TaxId: 411153 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GfoKat01
start..stop		 S start..stop
CatKat01 1116 0 7..708 12..713
PhepKat01 926 0 3..708 9..718
PEspKat01 920 0 7..708 26..739
CHpiKat01 911 0 7..708 14..728
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7261' 'complement(join(2768304..2770430))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2768304..2770430 2125  
complement(join(2768304..2770430))


exon

Literature and cross-references GfoKat01
Literature Bauer M., et al. (2006). Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter. Environ. Microbiol. 8:2201-2213(2006)
Protein ref. UniProtKB:   A0M4R4
DNA ref. GenBank:   CU207366.1 (2770430..2768304)
Protein sequence: GfoKat01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   708
PWM (Da):   %s   79887.03 Transmb domain:   %s   i9-31o
PI (pH):   %s   6.85
Sequence
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Send to Peroxiscan
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MKEDKGNAKQ KDMQQNTSDA EGKTMTTNQG LKVNDTNNSL KAGERGATLL EDFILREKIT HFDHERIPER IVHARGSAAH GYFELYESQE KYTKAGIFTD TKRKTPVFTR FSTVAGSKGS  ADMARDVRGF AVKFYTEEGI FDLVGNNMPI FFIQDAMKFP DLIHAVKPEP HREIPQAASA HDTFYDFVSR TPETLHNHIW VMSDRAIPRS LRMMEGFGIH TFRLINKEGK SHFVKFHWKP  LLGVNSVTWD EAVKLHGADS DFHRRDLWDA IDSGQFPEWE LGIQVVPEED EHKFDFDLLD PTKLIPEEMV PVQRIGKMTL NRNPDNFFAE TEQVAFHPGH IVPGIDFSND PLLQGRLFSY  TDTQLSRLGS PNFHEIPINR PVNPTHNNQR DGHMRMTVNK GNTAYFPNSM SGGCPHLAKM AEGGFTSYEE RIDANKVRAR SESFSDHFSQ PGIFYRSLKD WEKNHVAEAY SFELGKCNHD  YIKERMLWLI NNIDEDLAKK VADNLGLKIP SKIEKPVNQA IGADDDGKKN EPQKRKDYIE KSEALSQTHI KADSIATRKI AFLVGDGFDA ENVGSMKEAL EKKNAVVNLV ATHGGKVKCS 
KGEMHKVDAA LMTTESVAFD ALYIPGGSKS VKALKDSAKA KKFINESLKH CKAIAVDSEG EELFDETFGK DFKDDDAICI NKKPADFIKA IGMHRNWNRE EKAKMIPA 

Retrieve as FASTA  
Remarks strain="KT 0803"
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGGAAG ATAAAGGCAA CGCCAAGCAA AAAGACATGC AGCAGAACAC CTCTGATGCC GAAGGAAAAA CAATGACCAC CAATCAAGGA CTTAAAGTAA ATGATACTAA CAATTCCTTA  AAAGCGGGAG AGCGTGGAGC AACTTTGCTG GAAGATTTTA TTTTAAGGGA GAAAATAACA CATTTTGACC ATGAAAGAAT TCCGGAAAGG ATCGTTCATG CAAGGGGAAG TGCGGCTCAT  GGATATTTTG AGTTATATGA AAGTCAGGAG AAATATACCA AAGCAGGTAT TTTTACAGAT ACTAAAAGAA AAACTCCGGT ATTCACTCGA TTTTCAACCG TTGCAGGTTC TAAAGGATCG  GCAGATATGG CCAGGGATGT AAGAGGATTT GCCGTTAAAT TTTATACCGA AGAAGGAATT TTTGACCTTG TTGGGAATAA TATGCCAATC TTCTTTATTC AGGATGCGAT GAAGTTTCCA  GATCTTATTC ATGCTGTAAA ACCGGAACCG CATCGTGAAA TTCCGCAGGC AGCTTCTGCA CACGACACAT TTTATGATTT TGTTTCCCGT ACGCCCGAAA CATTACATAA TCATATCTGG  GTGATGAGCG ACCGGGCAAT ACCCAGAAGT TTGAGAATGA TGGAAGGTTT CGGGATTCAT ACCTTCAGAT TAATTAATAA AGAAGGGAAA TCTCATTTTG TTAAGTTTCA CTGGAAACCA  TTGCTAGGGG TAAATTCTGT GACCTGGGAT GAAGCAGTGA AGTTGCATGG CGCCGATTCA GATTTTCATC GTAGAGATCT ATGGGATGCT ATAGATTCCG GTCAGTTTCC AGAGTGGGAG  TTGGGAATAC AGGTAGTTCC AGAAGAGGAT GAGCATAAAT TCGATTTTGA TCTACTGGAT CCCACTAAAT TAATTCCTGA AGAAATGGTG CCGGTACAGC GTATCGGGAA AATGACCCTT  AATCGCAATC CTGATAATTT CTTTGCGGAA ACTGAGCAGG TAGCTTTCCA TCCGGGACAT ATAGTTCCTG GTATTGATTT TAGTAATGAT CCGCTGCTGC AAGGGAGACT TTTTTCTTAT  ACAGATACAC AGCTTTCAAG ATTAGGAAGT CCGAATTTTC ATGAAATTCC AATAAACAGG CCAGTCAATC CAACGCATAA TAATCAACGT GACGGACACA TGAGAATGAC GGTTAATAAA  GGAAATACAG CATATTTTCC AAATTCCATG AGCGGAGGAT GCCCGCATTT GGCTAAAATG GCCGAGGGTG GATTTACCAG TTACGAGGAA AGAATTGATG CTAATAAAGT TAGAGCAAGA  AGTGAAAGTT TTAGCGATCA TTTTTCTCAG CCGGGGATTT TTTATAGAAG TTTAAAAGAT TGGGAAAAGA ATCATGTGGC AGAAGCATAT TCTTTTGAGC TTGGAAAATG TAATCATGAC  TATATTAAGG AACGTATGTT ATGGCTCATT AATAATATAG ATGAAGATCT GGCAAAAAAG GTAGCCGATA ACTTAGGATT GAAAATTCCT TCTAAAATTG AAAAACCGGT GAACCAGGCC  ATAGGAGCAG ATGATGATGG CAAGAAAAAT GAACCGCAAA AAAGAAAAGA TTATATCGAA AAATCTGAAG CATTAAGTCA GACTCATATA AAAGCAGATA GTATTGCAAC CAGGAAAATA  GCCTTTTTGG TAGGTGATGG CTTTGATGCT GAAAATGTTG GCAGTATGAA AGAAGCATTG GAAAAGAAAA ATGCAGTAGT AAATTTAGTT GCAACACACG GAGGGAAAGT AAAATGTTCT  AAAGGTGAAA TGCATAAAGT GGATGCAGCT TTAATGACTA CGGAGAGTGT GGCTTTTGAT GCACTTTATA TCCCTGGTGG ATCTAAAAGT GTAAAAGCTT TGAAAGATAG TGCCAAGGCG  AAAAAGTTTA TCAATGAAAG TCTAAAACAT TGTAAAGCCA TTGCGGTGGA TTCTGAAGGT GAGGAGTTAT TTGATGAGAC CTTCGGAAAG GATTTTAAAG ATGACGATGC CATTTGTATC 
AATAAAAAAC CAGCAGATTT TATAAAAGCG ATAGGGATGC ATAGAAACTG GAATAGAGAG GAAAAAGCAA AAATGATTCC TGCGTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGGAAG ATAAAGGCAA CGCCAAGCAA AAAGACATGC AGCAGAACAC CTCTGATGCC GAAGGAAAAA CAATGACCAC CAATCAAGGA CTTAAAGTAA ATGATACTAA CAATTCCTTA  AAAGCGGGAG AGCGTGGAGC AACTTTGCTG GAAGATTTTA TTTTAAGGGA GAAAATAACA CATTTTGACC ATGAAAGAAT TCCGGAAAGG ATCGTTCATG CAAGGGGAAG TGCGGCTCAT  GGATATTTTG AGTTATATGA AAGTCAGGAG AAATATACCA AAGCAGGTAT TTTTACAGAT ACTAAAAGAA AAACTCCGGT ATTCACTCGA TTTTCAACCG TTGCAGGTTC TAAAGGATCG  GCAGATATGG CCAGGGATGT AAGAGGATTT GCCGTTAAAT TTTATACCGA AGAAGGAATT TTTGACCTTG TTGGGAATAA TATGCCAATC TTCTTTATTC AGGATGCGAT GAAGTTTCCA  GATCTTATTC ATGCTGTAAA ACCGGAACCG CATCGTGAAA TTCCGCAGGC AGCTTCTGCA CACGACACAT TTTATGATTT TGTTTCCCGT ACGCCCGAAA CATTACATAA TCATATCTGG  GTGATGAGCG ACCGGGCAAT ACCCAGAAGT TTGAGAATGA TGGAAGGTTT CGGGATTCAT ACCTTCAGAT TAATTAATAA AGAAGGGAAA TCTCATTTTG TTAAGTTTCA CTGGAAACCA  TTGCTAGGGG TAAATTCTGT GACCTGGGAT GAAGCAGTGA AGTTGCATGG CGCCGATTCA GATTTTCATC GTAGAGATCT ATGGGATGCT ATAGATTCCG GTCAGTTTCC AGAGTGGGAG  TTGGGAATAC AGGTAGTTCC AGAAGAGGAT GAGCATAAAT TCGATTTTGA TCTACTGGAT CCCACTAAAT TAATTCCTGA AGAAATGGTG CCGGTACAGC GTATCGGGAA AATGACCCTT  AATCGCAATC CTGATAATTT CTTTGCGGAA ACTGAGCAGG TAGCTTTCCA TCCGGGACAT ATAGTTCCTG GTATTGATTT TAGTAATGAT CCGCTGCTGC AAGGGAGACT TTTTTCTTAT  ACAGATACAC AGCTTTCAAG ATTAGGAAGT CCGAATTTTC ATGAAATTCC AATAAACAGG CCAGTCAATC CAACGCATAA TAATCAACGT GACGGACACA TGAGAATGAC GGTTAATAAA  GGAAATACAG CATATTTTCC AAATTCCATG AGCGGAGGAT GCCCGCATTT GGCTAAAATG GCCGAGGGTG GATTTACCAG TTACGAGGAA AGAATTGATG CTAATAAAGT TAGAGCAAGA  AGTGAAAGTT TTAGCGATCA TTTTTCTCAG CCGGGGATTT TTTATAGAAG TTTAAAAGAT TGGGAAAAGA ATCATGTGGC AGAAGCATAT TCTTTTGAGC TTGGAAAATG TAATCATGAC  TATATTAAGG AACGTATGTT ATGGCTCATT AATAATATAG ATGAAGATCT GGCAAAAAAG GTAGCCGATA ACTTAGGATT GAAAATTCCT TCTAAAATTG AAAAACCGGT GAACCAGGCC  ATAGGAGCAG ATGATGATGG CAAGAAAAAT GAACCGCAAA AAAGAAAAGA TTATATCGAA AAATCTGAAG CATTAAGTCA GACTCATATA AAAGCAGATA GTATTGCAAC CAGGAAAATA  GCCTTTTTGG TAGGTGATGG CTTTGATGCT GAAAATGTTG GCAGTATGAA AGAAGCATTG GAAAAGAAAA ATGCAGTAGT AAATTTAGTT GCAACACACG GAGGGAAAGT AAAATGTTCT  AAAGGTGAAA TGCATAAAGT GGATGCAGCT TTAATGACTA CGGAGAGTGT GGCTTTTGAT GCACTTTATA TCCCTGGTGG ATCTAAAAGT GTAAAAGCTT TGAAAGATAG TGCCAAGGCG  AAAAAGTTTA TCAATGAAAG TCTAAAACAT TGTAAAGCCA TTGCGGTGGA TTCTGAAGGT GAGGAGTTAT TTGATGAGAC CTTCGGAAAG GATTTTAAAG ATGACGATGC CATTTGTATC 
AATAAAAAAC CAGCAGATTT TATAAAAGCG ATAGGGATGC ATAGAAACTG GAATAGAGAG GAAAAAGCAA AAATGATTCC TGCGTAA 

Retrieve as FASTA