Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
361 (307) |
| PWM (Da): |
39403.11 (33979.9) |
Transmb domain: |
i39-61o |
| PI (pH): |
8.94 (7.18) |
Peptide Signal: |
cut: 20 range:20-326 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MDLKQTECAK TLLHKVADYE TQIAYKRSTT HDRTLSETSF CSVKMILPLI FLCCVFHLVS AQLRVGFYNS TCPQAETIVR QAVQKQFNSD RSITAALLRM HFHDCFVRGC DASILIKSTK
SKQSERNAGP NQTVRGFELI DNIKKSIEIS CPSTVSCADI ITLATRDAVA LVGGPTYAIP TGRRDGLVSN AADVNLPGPS FTVPQALQSF TNKGLSLNDM VTLLGAHTVG VAHCNFFQNR
LSPVPDNTMD PTLAAQLLKT CSKSTATAFL DQNTSFTIDN QFFRQIMLKK GILKIDQELT LDKSSASIVS GFASNENTFR QSFANAMIKM ASIDILVGRA GEIRNNCGVF NPPNQKGRKV
L
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (introns 1 and 2) and ESTs. Cultivar="Hicks Broadleaf" |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGATCTGA AACAGACTGA ATGTGCCAAA ACGTTGCTTC ATAAGGTGGC TGATTATGAG ACACAAATTG CTTACAAGAG ATCGACTACA CATGATAGGT GTAAGCCAGG AGAAGACATG
TCTTCTATGT GGTATGCATG ATGAAACAAT CCAGCACTTA TACTTTGAGT GCCAATTCTC AAGAAGAACT GTGGAGGAAT TATGCATATG GCTGGGTTTA AAGATCAACC ATTTAGATCA
ACACAACATA TGGAGGAAGA TAAGAAGAGG CATCAAAGGA AGAATATGCA GAGGATTTGG TGCTGCCATC ATAGTAGCAG TCATGTATGG AATATGGAAA GCAAGAAATG AAGCTTTATG
GAACCAAAAA GTGCCAATAC CAGGAAAGAT GTGACAGAGT ATCAAAGAGG ATAGCAAGCA CATAATTCAA TTGATTGGTG ACAATAGGAA AAATAGGAAA GAAAAGGAAT GGATAAACCT
CTTGTATAGA TAGTATACTA TAGAGCAAAC CTACCTAGTA GGGATGCATA GAAGTAAGCT AAAGTAGAAT AGCTTATAGT TATAGTTGGT GACAAATTGT AAATATTCTT GTCAGGTGGA
GATCAATAAA GTTTTCTTTC ACCAAAAAAA AAATATTGTT TGATGTAGTG TATTAAAAAT TAAAATGCAT TGCATAATTT TTAAGAAAAT TAGTCGTTTA CTAAAATAAA CTCCATATTC
TTTAGCTTTA AGGGACTTTA AAGATAATTT TGTCTTTAAT CATGCTAATG CATGCATTAA TAGCCTTGGT ATTTCTAACA CCATGGTTTA CTATGCATTA TTTACCCATA GAATAATACC
AAATAGGTTA TATAATTAAT AATTGCATTA GTACCACATA TATGTTAAAA AATGTACCAA AGAAGAAAAA CATACCAATA ACTAATGCAT ACATTATTTT CTCTAATAAT CGTGCCACCC
TAAGACGTTA TGTAAGAAGC CACTTGGATG CATTTAGCCA TTTGTGCATT AACGCGTAGG AGAATGTGAA CCGAATAAAC TATTTTTGAC ATGCCCACTA GGTGTCCGTT GACGATGCAT
GTGGCCAGCG TCAGAACCCC CTTCTCCTGC ATCTATATAT ATTTCTTGAA TGGCTTTGAT CAGCTTCATC ACTAGCTAGT AGGGAAAACC CAGAATAGAC TGTACAAACT ATCTTCAATT
AGTAGAACTC TCTCAGAAAC ATCCTTCTGT TCTGTGAAAA TGATATTACC ATTAATATTT CTCTGTTGTG TTTTTCATTT AGTTTCAGCT CAACTTCGAG TTGGCTTTTA CAATTCTACG
TGTCCACAAG CTGAAACTAT TGTTCGACAA GCTGTGCAAA AGCAGTTCAA TAGCGACCGT TCCATCACTG CAGCTCTGCT TCGCATGCAT TTTCATGACT GCTTTGTGAG AGTAAGTGTA
GTACTTCAAG TTTTACTTTT TCTTCTCTAA CTGCTACTCC CTCCGTTTAG AAATAGAATG AATCTTTAAT TTTACTATTT AAAAAATCAA ATAAGGTTTT TTTGATCCTG TTTTTTTGCT
AATATTTTAG ATCAATTCGT ATACTGGAAA TAAATTAATT TAACTTCGTA CTCCGAAAAG CTTCAAACAA ATTAAAACGG GGAATGGCTT TCTTGATCAA ATAGACTCGC ACAACCTTCT
TTTAGCGTTC TCCTCCAACA CCCACGACCA TATTTATCAT TTCGTGGTGG GCTCTTATAT TGTCGGGTAA ATTGCATCAA TGATCATTCA AGTTAAGCTT GTAATACAAA AGTCTTTTTC
GCAGAAGCTC ATTCCTATAT ATAAGAAATA CGTAATAATC ATATTTCACG TCGATAATCA TGTGATCTCC CGCAACTCAC ACAAGAAAAG ATACTAAATT ATACTTAAAA ACATGCACTT
TTTCTCATTT ATCAATTTAC TTTGTATTAT TTTTATACAA TGTCTATGTA TCTATATACA TATAGTGTGT AGAAAAAAAA TGTATTTACT TACAAAATGA AAAATATATA ATTGAGAAAC
AGTGACGAAT AGCACCCCGT ACAAAACAGT ACCTCTACCT GGTTCTATGC AAGCATTATT CCAGAGTTAA TGCGCAGAGA GCAATATCTC GTATnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnA
TACAAATGTC TATGTATCTA TATACATATA GTGTGTAGAA AAAAAATGTA TTTACTTACA AAATGAAAAA TATATAATTG AGAAACAGTG ACGAATAGCA CCCCGTACAA AACAGTACCT
CTACCTGGTT CTATGCAAGC ATTATTCCAG AGTTAATGCG CAGAGAGCAA TATCTCGTAT ATTCATTTTA TCGTTAGAGG CACTTTCACC TGGAAATGGA AAATATATTT TGCCAACATC
GTTTCCCATT GCTCGTAATT TTAATTGTTA GAATATATTT TCTATTTTGT ATTCAAGATA CTTATAAATT CAAAAAATTG CTTCTAATTG TGCTCGTTTA CGTAACGTAA AACTGAACTT
CAGGGTTGTG ATGCATCCAT ACTTATAAAG TCAACAAAGT CTAAGCAATC GGAAAGAAAC GCTGGACCAA ATCAAACAGT ACGAGGTTTC GAGCTTATAG ATAATATTAA AAAAAGCATA
GAAATATCAT GTCCATCAAC TGTTTCATGC GCTGACATAA TAACACTAGC AACCCGGGAT GCAGTAGCGC TAGTTGGAGG TCCTACCTAT GCCATTCCAA CTGGAAGGAG AGATGGCCTG
GTTTCAAATG CAGCAGATGT AAACTTGCCA GGTCCATCAT TTACAGTTCC ACAAGCCCTC CAATCGTTCA CAAACAAAGG GCTGTCCTTA AATGATATGG TGACCCTATT AGGAGCTCAC
ACTGTCGGAG TTGCACACTG TAATTTTTTC CAAAATAGGC TTTCTCCGGT ACCTGATAAC ACCATGGATC CTACTTTGGC TGCCCAACTC TTGAAAACTT GTTCGAAAAG CACCGCAACA
GCGTTTTTGG ATCAGAATAC ATCTTTCACG ATAGACAACC AGTTCTTTAG ACAGATTATG TTAAAAAAAG GCATTCTGAA GATTGATCAA GAGCTTACCT TGGATAAGTC TAGTGCTTCA
ATTGTTTCAG GTTTTGCTTC CAACGAGAAT ACCTTCAGAC AGAGTTTCGC AAATGCAATG ATAAAAATGG CAAGTATTGA TATTCTCGTT GGACGCGCTG GAGAAATTAG AAATAATTGT
GGGGTCTTTA ACCCGCCAAA TCAGAAGGGT CGCAAGGTTC TTTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCGGTCCGGA TTCCCGGGAT AAAACCCAGA ATAGACTGTA CAAACTATCT TCAATTAGTA GAACTCTCTC AGAAACATCC TTCTGTTCTG TGAAAATGAT ATTACCATTA ATATTTCTCT
GTTGTGTTTT TCATTTAGTT TCAGCTCAAC TTCGAGTTGG CTTTTACAAT TCTACGTGTC CACAAGCTGA AACTATTGTT CGACAAGCTG TGCAAAAGCA GTTCAATAGC GACCGTTCCA
TCACTGCAGC TCTGCTTCGC ATGCATTTTC ATGACTGCTT TGTGAGAGGT TGTGATGCAT CCATACTTAT AAAGTCAACA AAGTCTAAGC AATCGGAAAG AAACGCTGGA CCAAATCAAA
CAGTACGAGG TTTCGAGCTT ATAGATAATA TTAAAAAAAG CATAGAAATA TCATGTCCAT CAACTGTTTC ATGCGCTGAC ATAATAACAC TAGCAACCCG GGATGCAGTA GCGCTAGTTG
GAGGTCCTAC CTATGCCATT CCAACTGGAA GGAGAGATGG CCTGGTTTCA AATGCAGCAG ATGTAAACTT GCCAGGTCCA TCATTTACAG TTCCACAAGC CCTCCAATCG TTCACAAACA
AAGGGCTGTC CTTAAATGAT ATGGTGACCC TATTAGGAGC TCACACTGTC GGAGTTGCAC ACTGTAATTT TTTCCAAAAT AGGCTTTCTC CGGTACCTGA TAACACCATG GATCCTACTT
TGGCTGCCCA ACTCTTGAAA ACTTGTTCGA AAAGCACCGC AACAGCGTTT TTGGATCAGA ATACATCTTT CACGATAGAC AACCAGTTCT TTAGACAGAT TATGTTAAAA AAAGGCATTC
TGAAGATTGA TCAAGAGCTT ACCTTGGATA AGTCTAGTGC TTCAATTGTT TCAGGTTTTG CTTCCAACGA GAATACCTTC AGACAGAGTT TCGCAAATGC AATGATAAAA ATGGCAAGTA
TTGATATTCT CGTTGGACGC GCTGGAGAAA TTAGAAATAA TTGTGGGGTC TTTAACCCGC CAAATCAGAA GGGTCGCAAG GTTCTTTAG
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Retrieve as FASTA
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