Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
327 (301) |
PWM (Da): |
35942.55 (33035.0) |
Transmb domain: |
i7-29o |
PI (pH):
| 9.73 (9.73) |
Peptide Signal:
| cut: 27 range:27-327 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFSRHIVVL ILQLMLVPLA FNLCNAQGLK YGFYRKTCPR VESIVRETTA QYISKAPTLA APLLRMQFHD CFVRGCDGSV MLNSTKTNQA ERDAIPNQSL RGFQVINGVK SALENKCPGV
VSCADIVALV ARDAVSMIKG PYWKVPLGRR DGRVSNMLEA LNLLPAPFAN ISSLKAQFVS LGLNAKDLVV LSGGHTIGTS HCFSFTNRMY NFTGNGDADP TMDPNYIARL KLKCSPTDVT
TLVEMDPGSF KIFDEKYYTL VAKRRGLFQS DSALLDDIET KAYVKRQALT HGKTFFKDFG KSMVKMGKIG VLTGQAGEIR KHCDFVN
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic and 1 EST. Cultivar="SNN". Uncorrect prediction from SGN (fusion of 3 ORF coding for CIII Prx |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACGACATGCT CTGTAGTCAT AGAAATGTGT GGAATGTTTA GGACATAGTT CTAGATGTAC TTTATATGTA TCAAAGTTTT TATTCTAATT TCTATGGATG AAGTAATATT TTTATAGAAA
TTGTTATGGG AAAGGAATGT CTTCTTGACA TACAAAATGG ACTTTTATAG GGATGCGATG GTTCTGTAAT GCTAAACTCA ACCAAGACTA ATCAAGCTGA GAGAGATGCC ATTCCAAACC
AATCTCTAAG AGGATTCCAA GTGATTAATG GTGTAAAATC TGCACTAGAA AACAAGTGTC CAGGTGTTGT ATCTTGTGCA GATATCGTAG CCTTAGTAGC TCGGGATGCA GTTTCTATGG
TAAAATCTCA GTGGATAATA AGCCCGTCCT TTTACCCTTC TTTTATCACA TTGATTTTGA AGTGTTGATT ACATTTATAT AATTTGATTT TATAGATTAA AGGACCATAT TGGAAAGTTC
CCTTGGGAAG AAGAGATGGG AGAGTGTCAA ACATGTTAGA AGCCTTGAAC CTTTTACCAG CTCCATTTGC TAACATCTCT TCTCTT
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCCTCATGCG GCCGCTAGTT TCTATGATTA AAGGACCATA TTGGAAAGTT CCCCTGGGAA GAAGAGATGG GAGAGTGTCA AACATGTTAG AAGCCTTGAA CCTTTTACCA GCTCCATTTG
CTAACATCTC TTCTCTTAAA GCACAGTTTG TCTCTCTTGG TTTGAATGCA AAAGACCTTG TGGTTCTATC AGGAGGACAT ACCATTGGAA CTTCTCATTG TTTCTCTTTC ACAAACAGAA
TGTACAATTT CACAGGCAAT GGTGATGCTG ATCCAACAAT GGATCCAAAC TACATTGCTC GTTTGAAGCT AAAATGCAGT CCAACTGATG TTACAACACT TGTAGAAATG GATCCAGGAA
GTTTCAAAAT ATTTGATGAA AAATATTACA CACTTGTTGC TAAAAGGAGA GGGCTTTTTC AATCTGATTC TGCACTTCTT GATGATATTG AGACCAAAGC TTATGTTAAA CGTCAAGCTC
TTACCCATGG TAAAACATTT TTCAAAGATT TTGGTAAATC TATGGTGAAA ATGGGCAAGA TTGGTGTCTT GACTGGTCAA GCTGGTGAAA TCAGGAAACA TTGTGATTTT GTTAATTAA
|
Retrieve as FASTA
|
|