Entry information : SmKat02-1_5 (SmKat02a_5)
Entry ID 7280
Creation 2010-03-04 (Christophe Dunand)
Last sequence changes 2010-03-04 (Christophe Dunand)
Sequence status complete
Reviewer Bruno Savelli
Last annotation changes 2010-03-08 (Bruno Savelli)
Peroxidase information: SmKat02-1_5 (SmKat02a_5)
Name (synonym) SmKat02-1_5 (SmKat02a_5)
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmKat02-1_5
start..stop
S start..stop
SmKat02-2_1 1036 0 1..492 1..492
SmKat01-2_44 910 0 1..492 1..492
AcvKat02 897 0 1..492 1..492
SmKat01-1_2 895 0 1..492 1..492
Literature and cross-references SmKat02-1_5 (SmKat02a_5)
DNA ref. JGI genome:   scaffold_5 (1937112..1939296)
mRNA ref. JGI transcript:   167253
Protein sequence: SmKat02-1_5 (SmKat02a_5)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   492
PWM (Da):   %s   56647.92  
PI (pH):   %s   7.43
Sequence
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Send to Peroxiscan
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MDPYKHTPSS AFNSSFFTTN SGTPVWNNNS SLTVGSRGPI LLEDYHLIEK LAQFDRERIP ERVVHARGAS AKGYFEVTHD ISNLTCADFL RAPGVQTPLI VRFSTVIHER GSPETLRDPR  GFAVKFYTRE GNFDLVGNNI PVFFVRDGIK FPDMIHALKP NPKTHVQEPW RIMDHFSHHP ESCHMFTFLF DDHGIPLNYR HMEGFGVHTF TLVNRAGKCT YVKFHWKPTC GLKYLSKQEA  VVVGGSNHSH ATKDLYDSIA AGNYPEWKLF IQTMNPSNEE MFDFDPLDVT KTWPEEMFPL QPVGRMVLNK NIDNFFAENE QLAFCPALIV PGVYYTDDKM LQTRIFSYAD TQRHRLGPNY  LMLPANAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRFDAV RHAEQVPIPS RPVSGRREKV MLEKENNFAQ PGVRYRSWPA DRQERFIENW VDALSDSRVT HEIRSVWISY WSQCDKSLGQ 
RIAAQLQSKS NM 

Retrieve as FASTA  
Remarks Complete sequence from genomic (7 introns + 1 intron in 5'UTR)
DNA
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ATGGATCCTT ACAAGGTATT AGTTCTCCTT TTTTTTTTTC TTTTTTTTTC CCCCCCACGT TTAGTGCTCT GATCTTCTTC GTCTTTCCAG CACACTCCAT CAAGCGCTTT CAATTCTTCT  TTTTTCACCA CAAACTCTGG CACTCCCGTC TGGAACAACA ATTCCTCTTT GACAGTTGGG TCACGAGGTA CGTTATGATA GTGTTCGTTC TTTCTTGTAA GCGTTTAATT TTTTTTTTTC  TCAACGATCT CTCACATGGT GTTTTATCAG GGCCTATTCT GCTGGAAGAT TATCACTTGA TCGAGAAGCT TGCTCAGTTT GACAGGGAAC GCATTCCCGA GCGCGTCGTC CATGCGCGTG  GAGCAAGTGC AAAGGGTTAC TTTGAAGTCA CCCACGACAT CTCAAACCTC ACCTGCGCGG ATTTCCTGCG TGCACCTGGA GTCCAGACAC CGCTGATTGT GAGGTTCTCC ACCGTCATTC  ACGAACGTGG AAGCCCCGAG ACACTCCGTG ATCCCAGAGG CTTTGCCGTC AAGTTCTACA CGCGGGAGGT GAGTAAACTA TCTGGTCATG TTGCTAAGTT GGACACGAAA TTCCATCTTT  GACTTTTTTC GCTTTGTTTG CGAGCAGGGA AACTTCGATC TGGTTGGAAA CAACATTCCC GTGTTCTTCG TACGTGATGG CATCAAGTTC CCTGACATGA TCCACGCTCT CAAGCCAAAC  CCAAAGACGC ATGTTCAAGA GCCTTGGCGC ATTATGGACC ACTTCTCGCA TCATCCGGAG AGCTGTCACA TGTTTACTTT TCTCTTCGAC GACCACGGAA TTCCTCTCAA TTACCGTCAC  ATGGAAGGCT TCGGGGTACA CACGTTCACT CTGGTCAATC GCGCCGGCAA GTGTACGTAT GTCAAGTTCC ACTGGAAGCC AACTTGCGGA CTAAAGTATC TGAGCAAGCA AGAGGCTGTG  GTCGTCGGCG GCTCTAATCA CAGCCATGCG ACCAAGGATC TCTACGACTC CATCGCGGCC GGGAACTATC CAGAGTGGAA GCTGTTCATT CAGACTATGA ACCCCTCCAA CGAGGAGATG  TTCGACTTTG ATCCGCTCGA CGTTACGAAG ACTTGGCCGG AGGAAATGTT CCCGCTCCAA CCGGTTGGCC GCATGGTGCT CAACAAAAAC ATTGACAACT TCTTCGCTGA GAACGAGCAG  CTTGCATTTT GTCCGGCGCT CATCGTCCCT GGCGTCTACT ATACCGACGA CAAGATGCTC CAGACTAGAA TCTTCTCATA CGCCGACACG CAGCGGCACC GACTTGGACC GAACTATCTC  ATGCTGCCTG CAAATGCACC CAAGTGCGCA CATCACAATA ATCATCACGA AGGCTTTATG AACTTCATGC ACAGGGATGA GGAGGTATGG TGGTGGAATG TTCTCCAGTT TTTTCTTTGT  TTGAGCTTTT TTTAATGATT TGTACTCGTT CTGTCTTTTT GATTTTTCTA ACCACTCGTC GTGAACTGTC AAACACAGGT GAACTATTTT CCATCACGAT TCGACGCAGT TCGCCACGCC  GAGCAAGTCC CGATTCCCTC ACGTCCTGTG AGTGGCCGCC GAGAAAAGGT AGAGAAAAGC TTTGGCTTGT TTAAGCCTGG ATGCCAGCTT CAAAGTCTTG ACCGGTGCGT GCACAGGTGA  TGCTGGAAAA GGAGAACAAT TTCGCACAAC CTGGCGTGAG GTACAGATCA TGGCCAGCTG ACAGGTGAGC GAGCAATGTC GTGCAAAAAC TTCTGCCCAT GTTTTTCTTC CAATTTTTTT  TTTTTTTTTT AATTTCTCTC GCTCTCCCTC TCTCTCTTCT TTCTCTATTT CTCTCTCTCA CTCGCTTGAG GATCTGGTGG TCGTGCAAAG CAAAGTTTCC TAACTTTTGT GTTACACTGA  CTGTCTTTGC TTGGCAGGCA AGAGAGGTTC ATTGAGAATT GGGTGGACGC TCTATCCGAT TCACGCGTTA CTCATGAAAT ACGCAGCGTG TGGATTTCGT ATTGGTCCCA GGTACGTAGC  TTGTCTTTCT ATTCTTTCTT TTTTATCCTT CGACCGTCTC GATAGTGCAC GGCATGCTAA TTGTCTTTCT GCTTAACGCG TGCAGTGCGA TAAGTCCCTC GGCCAGCGAA TCGCGGCTCA 
ACTTCAGTCC AAATCCAACA TGTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
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ATGGATCCTT ACAAGCACAC TCCATCAAGC GCTTTCAATT CTTCTTTTTT CACCACAAAC TCTGGCACTC CCGTCTGGAA CAACAATTCC TCTTTGACAG TTGGGTCACG AGGGCCTATT  CTGCTGGAAG ATTATCACTT GATCGAGAAG CTTGCTCAGT TTGACAGGGA ACGCATTCCC GAGCGCGTCG TCCATGCGCG TGGAGCAAGT GCAAAGGGTT ACTTTGAAGT CACCCACGAC  ATCTCAAACC TCACCTGCGC GGATTTCCTG CGTGCACCTG GAGTCCAGAC ACCGCTGATT GTGAGGTTCT CCACCGTCAT TCACGAACGT GGAAGCCCCG AGACACTCCG TGATCCCAGA  GGCTTTGCCG TCAAGTTCTA CACGCGGGAG GGAAACTTCG ATCTGGTTGG AAACAACATT CCCGTGTTCT TCGTACGTGA TGGCATCAAG TTCCCTGACA TGATCCACGC TCTCAAGCCA  AACCCAAAGA CGCATGTTCA AGAGCCTTGG CGCATTATGG ACCACTTCTC GCATCATCCG GAGAGCTGTC ACATGTTTAC TTTTCTCTTC GACGACCACG GAATTCCTCT CAATTACCGT  CACATGGAAG GCTTCGGGGT ACACACGTTC ACTCTGGTCA ATCGCGCCGG CAAGTGTACG TATGTCAAGT TCCACTGGAA GCCAACTTGC GGACTAAAGT ATCTGAGCAA GCAAGAGGCT  GTGGTCGTCG GCGGCTCTAA TCACAGCCAT GCGACCAAGG ATCTCTACGA CTCCATCGCG GCCGGGAACT ATCCAGAGTG GAAGCTGTTC ATTCAGACTA TGAACCCCTC CAACGAGGAG  ATGTTCGACT TTGATCCGCT CGACGTTACG AAGACTTGGC CGGAGGAAAT GTTCCCGCTC CAACCGGTTG GCCGCATGGT GCTCAACAAA AACATTGACA ACTTCTTCGC TGAGAACGAG  CAGCTTGCAT TTTGTCCGGC GCTCATCGTC CCTGGCGTCT ACTATACCGA CGACAAGATG CTCCAGACTA GAATCTTCTC ATACGCCGAC ACGCAGCGGC ACCGACTTGG ACCGAACTAT  CTCATGCTGC CTGCAAATGC ACCCAAGTGC GCACATCACA ATAATCATCA CGAAGGCTTT ATGAACTTCA TGCACAGGGA TGAGGAGGTG AACTATTTTC CATCACGATT CGACGCAGTT  CGCCACGCCG AGCAAGTCCC GATTCCCTCA CGTCCTGTGA GTGGCCGCCG AGAAAAGGTG ATGCTGGAAA AGGAGAACAA TTTCGCACAA CCTGGCGTGA GGTACAGATC ATGGCCAGCT  GACAGGCAAG AGAGGTTCAT TGAGAATTGG GTGGACGCTC TATCCGATTC ACGCGTTACT CATGAAATAC GCAGCGTGTG GATTTCGTAT TGGTCCCAGT GCGATAAGTC CCTCGGCCAG 
CGAATCGCGG CTCAACTTCA GTCCAAATCC AACATGTGA 

Retrieve as FASTA