Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
257 |
PWM (Da): |
28157.68 |
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PI (pH):
| 4.66 |
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Sequence 306
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCDASILLNATDSMESEKDAEPNATLAGFDVIDGIKSELERSCPATVSCADVLALAARDAVAMLSGPSWGVLLGRKDSLTASIDMANKDLPNPKDSLAELIRMFEKNGLDERDLTALSGAHTVGMAHDCKNYDDRIYSRVGQGGDSIDPSFAAQRRQECEQKHGNATAPFDERTPAKFDNAYYIDLLARRGLLTSDQELYTQGCETGDLVKTYAMNGDVFFADFVRAMVKMGNIRPKHWWTPAEVRYSRLETIYRCT* |
Retrieve as FASTA
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Remarks |
Partial sequence from genomic (chromo 6, no intron). Exon 1 is missing. Incorrect prediction from Phytozome (exon 1 and start of exon 2 are missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGTTGTGATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGGCTTCGACGTGATCGACGGCATCAAGTCCGAGCTCGAG CGCAGCTGCCCGGCCACCGTCTCCTGCGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCGATGCTCAGCGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACC GCCAGCATAGACATGGCCAACAAGGATCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCGAGAAGAACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGTGCG CACACCGTCGGCATGGCACATGACTGCAAGAACTACGACGACCGCATCTACAGCCGCGTCGGCCAGGGCGGCGACAGCATCGACCCATCCTTCGCGGCGCAACGCCGGCAGGAATGCGAG CAGAAGCACGGCAACGCCACTGCGCCGTTCGACGAGCGGACGCCGGCCAAGTTCGACAACGCCTACTACATCGACTTGCTTGCGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTAC ACCCAGGGGTGCGAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCGTGAGGGCCATGGTTAAGATGGGGAACATACGCCCAAAGCATTGGTGG ACTCCGGCGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACCCATTATTGATGCCCATACTATTAAGTACAACACAACTATTTTGGAATCATTTGTAAGTGTGAAATTCCTTTCGATTTA ATTGTACAACAAACTGTAAGCTGTATTATTCTTTTGTACTTCATCTGTTTATTCATTTTTTTATGATGTATGGGAGATCACTTTGCCCTGGAAGTTCAATCACTCGCATACATGCACAAT GCCCGCTCTAGGTCGCCCGCTCTGATACTATGTCGGATATTATAGGGAAGACATGAATACTGTAAATATTTGACAAATATACATGAGTACATAGAGATCGAGGAGATAAGGAATGATTAC AGATATGGAAGTAATCCACACAAATCAATCATATCCTAATATAACTCTAACTACCATATACTCTAACACTGACCACCACAACACCCGCCACCTGCCGTCGCCTACTCGCCAAAATCCATC AGCTCTTTCTTCATTGCCATCACTTACTTCATTGCAACTGATTTTATTTTTATTTGCTCACGATTTAAAAGGTATGATAGGATTTGGAATCTATGGTTCATAGAGGTAGAAGGAGGGGAT CGTTCTGGCTTGTGGTTAGGTCGGGACCTAGGGCCGGGAGGACATAAACTTAACCAAGGGCAAAACAGTCTTATCAAGTTGCTTTGTATTTCCATTAAATTAATTATTTTTGTCCTATTA ATTGCATCAGTTTGGACGGCAGTGGCAAACAGAAGCACAGAAAATCAACTTCAGTTTTAAATTTGCAGTTTGTGTTTTTATAATGGCTATTTCGAATTAGGGGTTGAAAGTAGTGGCATA TTTGCAATTCTCCCTAAAATATAATATCTGGTCAGCCAAGGAGAGAAAGCTATGCAAAATGTCTATATTGCCCTCCTCTTCTAAAGCCTCTATAAGTGATGAATATGTTGGTGCATCTGT AGGTGAGGTACAGCAGGCTTGAAACCATCTATAGGTGCACCTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGTTGTGATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGGCTTCGACGTGATCGACGGCATCAAGTCCGAGCTCGAG CGCAGCTGCCCGGCCACCGTCTCCTGCGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCGATGCTCAGCGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACC GCCAGCATAGACATGGCCAACAAGGATCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCGAGAAGAACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGTGCG CACACCGTCGGCATGGCACATGACTGCAAGAACTACGACGACCGCATCTACAGCCGCGTCGGCCAGGGCGGCGACAGCATCGACCCATCCTTCGCGGCGCAACGCCGGCAGGAATGCGAG CAGAAGCACGGCAACGCCACTGCGCCGTTCGACGAGCGGACGCCGGCCAAGTTCGACAACGCCTACTACATCGACTTGCTTGCGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTAC ACCCAGGGGTGCGAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCGTGAGGGCCATGGTTAAGATGGGGAACATACGCCCAAAGCATTGGTGG ACTCCGGCGGAGGTGAGGTACAGCAGGCTTGAAACCATCTATAGGTGCACCTAG |
Retrieve as FASTA
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