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Entry information : NgrPxDo01
Entry ID 7299
Creation 2010-04-15 (Christophe Dunand)
Last sequence changes 2012-05-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-30 (Christophe Dunand)
Peroxidase information: NgrPxDo01
Name NgrPxDo01
Class Short peroxidockerin    [Orthogroup: PxDo001]
Taxonomy Eukaryota Heterolobosea Vahlkampfiidae Naegleria
Organism Naegleria gruberi    [TaxId: 5762 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NgrPxDo01
start..stop		 S start..stop
NgrPxDo02 572 0 63..598 21..559
RbaPxDo02 275 1.35e-82 81..585 197..684
RbaPxDo01 262 2.65e-78 87..583 192..670
MchtPxDo-rel 257 4.73e-78 87..583 34..534
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7299' 'join(149953..151764)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 149953..151764 1810  
join(149953..151764)


exon

Literature and cross-references NgrPxDo01
Literature Fritz-Laylin,L.K. et al., The genome of Naegleria gruberi illuminates early eukaryotic versatility. Cell 140 (5), 631-642 (2010)
Protein ref. UniProtKB:   D2VEU6
DNA ref. GenBank:   GG738867.1 (149953..151764)
EST ref. GenBank:   FE243823.1 [5' end]  FE231133.1 [3' end]
Protein sequence: NgrPxDo01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   603
PWM (Da):   %s   67176.31 Transmb domain:   %s   i47-69o
PI (pH):   %s   8.36
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKVTSTWMF STSHFTVNQR YFTLAHPLRG HKNLSEKTKT NMRQTVVFSV VVLIATLCLT VGFVHSKAID SFSLFKLFTP VYENCYSHDG VNVNKKHVTW GRTGESLPRL TKAAYTDGVK  DPPRLTLSAR VISNAFSKQT TCDESNDFND SSMIYAYGQF VDHDISNEGA GLKFTETLNI EVPPGDVWTT ALPFTRAVFA SDKPTYVNEP VNQVNFVTGY MDCSQIYGSD EIRADALREK  VGGFLKADVQ YGKEFLPKSF VDPKSGLFFI GTVNNSVIAG DNRATEALPI SIMQTLMLRE HNRLAKLVAS RFGVSQQQLS NSRADEWIYQ TARTINCAQI QHITYNEYLP RILGKFAPKP  KDLCYDEEVK TTVTTEFATA AFRFGHSTVG CDMKRFTGNG SELAPIDFGN AFNAYPVLTQ SAEELDNLLR GLIKHHAQNL DEKVVDGLRQ VIRGRLDLVA RNIQRGRDVG LPDYNTIRTT  LGFPALNVTQ ITSRADVQAK LISFWGVNLV GLEPWLGILL EQKVENSQLG ELGTHLLKTQ FENFVKGDNC FYSHNPQTWA RSLFKKEIEK VTLADIIDAN TGVKKGEKSM GTSPFVAKYG 
PLV 

Retrieve as FASTA  
Remarks Complete sequence from genomic (No intron) and 23 of ESTs. Strain="NEG-M".
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAAG TTACCTCTAC ATGGATGTTT TCAACTTCAC ATTTTACCGT CAATCAAAGA TATTTCACAC TCGCTCATCC ACTACGAGGT CACAAAAATT TATCAGAAAA AACAAAAACA  AATATGAGAC AAACAGTTGT GTTTAGTGTT GTGGTATTGA TTGCCACTCT CTGTCTGACG GTTGGCTTTG TTCATTCAAA GGCAATTGAC AGTTTCTCCC TGTTCAAACT CTTCACACCA  GTCTATGAGA ATTGTTACTC TCACGATGGT GTCAATGTAA ATAAGAAACA CGTTACTTGG GGACGTACAG GTGAATCACT TCCACGTTTA ACTAAGGCTG CCTATACTGA TGGTGTTAAA  GATCCACCAC GTTTGACTTT GAGTGCTAGA GTTATTTCTA ATGCTTTCAG TAAGCAAACT ACCTGTGATG AATCTAATGA TTTCAATGAT AGTTCAATGA TTTATGCGTA TGGTCAATTT  GTGGATCATG ATATTTCCAA TGAAGGAGCT GGTTTAAAGT TTACTGAAAC TTTAAATATT GAAGTACCTC CTGGTGATGT TTGGACAACT GCTCTTCCAT TCACCAGAGC TGTCTTTGCC  TCTGACAAGC CAACTTATGT TAATGAGCCA GTCAATCAAG TGAACTTTGT TACTGGTTAT ATGGATTGTA GTCAAATCTA TGGTTCTGAT GAGATTCGTG CTGATGCTCT TCGTGAAAAA  GTTGGTGGTT TCTTAAAGGC TGATGTCCAA TATGGAAAGG AATTTTTGCC AAAGAGTTTT GTTGATCCAA AGAGTGGATT ATTCTTCATT GGAACGGTCA ACAATTCTGT AATAGCTGGA  GACAATAGAG CAACTGAAGC CCTTCCAATC TCAATCATGC AAACTTTAAT GTTGAGAGAG CATAACAGAT TGGCAAAATT AGTAGCTTCC AGATTTGGAG TATCTCAACA ACAACTTTCA  AACTCAAGAG CTGATGAATG GATTTATCAA ACTGCTCGTA CCATTAACTG TGCTCAAATC CAACACATTA CATACAATGA ATATTTGCCA AGAATTTTGG GTAAATTCGC TCCAAAACCA  AAAGACTTGT GTTATGATGA AGAAGTCAAG ACAACTGTTA CTACAGAATT TGCCACTGCT GCTTTTAGAT TTGGCCACAG TACTGTTGGG TGTGATATGA AGAGATTCAC TGGTAATGGT  AGTGAACTAG CTCCAATTGA CTTTGGTAAT GCTTTCAATG CTTATCCAGT TTTAACTCAA TCTGCTGAAG AATTGGATAA TTTGTTGAGA GGTCTCATCA AGCATCACGC TCAAAACTTG  GATGAAAAGG TTGTTGATGG TTTACGTCAA GTTATCAGAG GTCGTTTGGA TCTTGTTGCC AGAAACATTC AAAGAGGTAG AGATGTTGGT CTTCCAGATT ACAATACCAT TAGAACTACC  CTCGGTTTCC CAGCTCTCAA CGTTACTCAA ATCACATCTC GTGCTGATGT TCAAGCCAAG TTAATCTCAT TCTGGGGTGT CAATTTGGTT GGTTTGGAAC CATGGTTGGG AATTCTCCTC  GAACAAAAGG TTGAAAACTC TCAATTGGGT GAATTAGGTA CTCACTTACT CAAGACTCAA TTTGAAAACT TTGTAAAGGG AGATAACTGT TTCTACTCTC ACAATCCTCA AACATGGGCT  CGTTCCTTGT TCAAGAAGGA AATTGAAAAG GTTACTCTTG CTGATATCAT TGATGCTAAT ACTGGTGTTA AGAAGGGTGA AAAGTCTATG GGTACTTCTC CATTCGTTGC CAAGTATGGT 
CCATTGGTTT AA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAAG TTACCTCTAC ATGGATGTTT TCAACTTCAC ATTTTACCGT CAATCAAAGA TATTTCACAC TCGCTCATCC ACTACGAGGT CACAAAAATT TATCAGAAAA AACAAAAACA  AATATGAGAC AAACAGTTGT GTTTAGTGTT GTGGTATTGA TTGCCACTCT CTGTCTGACG GTTGGCTTTG TTCATTCAAA GGCAATTGAC AGTTTCTCCC TGTTCAAACT CTTCACACCA  GTCTATGAGA ATTGTTACTC TCACGATGGT GTCAATGTAA ATAAGAAACA CGTTACTTGG GGACGTACAG GTGAATCACT TCCACGTTTA ACTAAGGCTG CCTATACTGA TGGTGTTAAA  GATCCACCAC GTTTGACTTT GAGTGCTAGA GTTATTTCTA ATGCTTTCAG TAAGCAAACT ACCTGTGATG AATCTAATGA TTTCAATGAT AGTTCAATGA TTTATGCGTA TGGTCAATTT  GTGGATCATG ATATTTCCAA TGAAGGAGCT GGTTTAAAGT TTACTGAAAC TTTAAATATT GAAGTACCTC CTGGTGATGT TTGGACAACT GCTCTTCCAT TCACCAGAGC TGTCTTTGCC  TCTGACAAGC CAACTTATGT TAATGAGCCA GTCAATCAAG TGAACTTTGT TACTGGTTAT ATGGATTGTA GTCAAATCTA TGGTTCTGAT GAGATTCGTG CTGATGCTCT TCGTGAAAAA  GTTGGTGGTT TCTTAAAGGC TGATGTCCAA TATGGAAAGG AATTTTTGCC AAAGAGTTTT GTTGATCCAA AGAGTGGATT ATTCTTCATT GGAACGGTCA ACAATTCTGT AATAGCTGGA  GACAATAGAG CAACTGAAGC CCTTCCAATC TCAATCATGC AAACTTTAAT GTTGAGAGAG CATAACAGAT TGGCAAAATT AGTAGCTTCC AGATTTGGAG TATCTCAACA ACAACTTTCA  AACTCAAGAG CTGATGAATG GATTTATCAA ACTGCTCGTA CCATTAACTG TGCTCAAATC CAACACATTA CATACAATGA ATATTTGCCA AGAATTTTGG GTAAATTCGC TCCAAAACCA  AAAGACTTGT GTTATGATGA AGAAGTCAAG ACAACTGTTA CTACAGAATT TGCCACTGCT GCTTTTAGAT TTGGCCACAG TACTGTTGGG TGTGATATGA AGAGATTCAC TGGTAATGGT  AGTGAACTAG CTCCAATTGA CTTTGGTAAT GCTTTCAATG CTTATCCAGT TTTAACTCAA TCTGCTGAAG AATTGGATAA TTTGTTGAGA GGTCTCATCA AGCATCACGC TCAAAACTTG  GATGAAAAGG TTGTTGATGG TTTACGTCAA GTTATCAGAG GTCGTTTGGA TCTTGTTGCC AGAAACATTC AAAGAGGTAG AGATGTTGGT CTTCCAGATT ACAATACCAT TAGAACTACC  CTCGGTTTCC CAGCTCTCAA CGTTACTCAA ATCACATCTC GTGCTGATGT TCAAGCCAAG TTAATCTCAT TCTGGGGTGT CAATTTGGTT GGTTTGGAAC CATGGTTGGG AATTCTCCTC  GAACAAAAGG TTGAAAACTC TCAATTGGGT GAATTAGGTA CTCACTTACT CAAGACTCAA TTTGAAAACT TTGTAAAGGG AGATAACTGT TTCTACTCTC ACAATCCTCA AACATGGGCT  CGTTCCTTGT TCAAGAAGGA AATTGAAAAG GTTACTCTTG CTGATATCAT TGATGCTAAT ACTGGTGTTA AGAAGGGTGA AAAGTCTATG GGTACTTCTC CATTCGTTGC CAAGTATGGT 
CCATTGGTTT AA 

Retrieve as FASTA