Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
310 (325) |
PWM (Da): |
30494.23 (35819.7) |
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PI (pH):
| 5.41 (9.73) |
Peptide Signal:
| cut: 23 range:23-347 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
IFTGFVQLMV NSLTEPFYAA NCPQGPAEVF EGVHCWVQGD RSLAPSLPRF NFHxxFRALS HASVLFDSMN GVPGEKEGKG SMRSLGAFEV IDDMKRQFEA LCPGLVACAD ILALAARDAI
VGGGAIPGVA RGRRDGVQFL ASEANTDLPP PLPDYDSVVS MLAEKGLNAR DMDLLSGEST xxxxxxxxxx xxxxxxxxxT ATDPRSHPVF AESLKKQCEP GDFSTEILMA QSKRADSWDY
N*ISDLF*Gx xxxxxxEELK RYSAGLKVVR TMNRVGSPLN RESGNSVIKM GRAYFLTGIL TQGDIRMKIQ TL
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Retrieve as FASTA
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Remarks |
Pseudogene or partial sequence from genomic and 1 EST (short fragment). No prediction from Phytozome. but partial prediction in Marpolbase. Strain="E". DNA contains stop, frame shift and missing fragment. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGACTCCACA AGCACTATGC TTAAGGCGAC ACGGTCAAGG CTGCGTGCTC CTTGACTGCT GGTACACCGC CGAACTAACA CCCCGAAGCC CATCTGTACA CAGGAACGAA CAATGTGAGC
AGCAGGAGGG AGGGAGGCAA GGAGGGAGGG AGGTCGGGAA GCAACGCGGT GAACCTCAGC AGGACCCACC CGATCTCTAA AAAGGTCGTC ACCTCTAGCA CACGACCTCC CTCGATCTGC
AGGTCTCTCG AGAAGTGTTC CATCGCAGCC TTTCACAGGG AGCTAAATTT GGAGTTTGTC ATCGGACGGT GAATCGGATT TAGAACTTAA AGAGACGAGG CGCTGTCAGG TCTGCTCACG
CTGATGATGT CCTTCCTGAA CCGATGGTGT CGGAGCATCG TAGCTACAGC CAACTCAGAG TTCGCTACAG AAAACCAAGA GGCATGCAAA GAACTCGTCC ATTCTCTCAG CATCTGGCAT
CTCCATGCGC AGTTTGGTAC ATTCTGCGAC CGAATTGTTC AAATTGCTGA TACCTTCACC TTCATCTTCT TCTCTTCAAA GTCCTTTATT CCTCTCACGT GCTCAATTGC CCAATTGCCA
CTAGTGCAAG TCACACAGTG AAATCGCAAT CTTGAGATCC TGATGTTCTT TGTGAAGGCT GGATCGAGAT CCACACGACT GCATGTCGAA TTGCTTCTCT CGCACGTTCC TTGCGAGAAA
CTAGTCTTTA CTCCGCAGCT AACCAGGCAT CTTCTGACGT TCCTCCAGTT CGAACTGAAG GAGACCTGCA CGTAGACGAT TCAGAACGGC CTGCAGTATT TCCCGTCAGT TATCTGTAAC
TGTTCCCGTC GATCGGATGG AAGCTTTGAA GAATAAGCCG AAGAATATTT ACGGGTTTCG TCCAGCTTAT GGTCAACTCT CTAACTGAGC CCTTCTATGC CGCCAACTGC CCTCAAGGCC
CCGCCGAGGT GTTCGAGGGG GTCCATTGTT GGGTGCAGGG CGACAGGTCC CTCGCCCCAT CTCTCCCAAG GTTCAACTTC CATACGCCCA TCTCGATCCT TATATCAACA TCACATCCCA
TAATGAGAAC CCGACCTTCG TTCTCGAGGT TCGATGGAGG ATGATCCAGG CTCCTTACAG GCCATACAGA TATAGATTCG GAGCGCCGAT CATGTCTTTG TGTCATGGCT CAGTTCACTT
CAGAGCACTG AGCCATGCAT CTGTTCTTTT CGACTCGATG AATGGCGTAC CTGGCGAGAA GGAGGGCAAG GGCAGCATGC GCTCTCTCGG GGCATTTGAG GTCATCGACG ACATGAAGAG
GCAGTTCGAA GCCTTGTGCC CAGGTCTCGT TGCCTGCGCC GACATTCTTG CTCTGGCTGC CCGAGACGCC ATCGTAGTGG TAAGTTGGTC TTGGTAACTC AGGAAGACTA TGTCGAACTC
GGATATCTGG TGATGACGAG ATGCAATGAG AACAAAACTT CTCGAGTCTC CTGCAATGTT GGATTGCGTG AAGAATATGT TTTCAGCTGA AATACCACTT GGACACAGAT CCATTTGTTA
CGAGCATATA CGAACTGTTC TAGTTCGATG TTGTTCTACC TTGAAGAGCC CCGGTGCGTC GTGATTGCAG ATGGGAGGAG GAGCGATCCC GGGGGTTGCT CGAGGTCGAC GCGACGGAGT
GCAGTTTTTG GCATCGGAGG CCAACACCGA CCTTCCACCT CCACTTCCCG ACTACGATAG CGTCGTCAGC ATGCTGGCCG AGAAGGGCCT CAACGCCAGG GACATGGATT TGCTGTCAGG
TGAATCCACA CGATACTTCA CTAGGCCCAC AGAGACAACT ATGACATAGA GCTTCGTATC AGAAGTGAAG TGCACATTCC TTACACAGTC TTATAAGAAT CTCTTGCCTG GATTGCATGC
TCCATTCTTC CTGCCCTTAC GGAAGTAGTG AGTGACTAGG GGCAAGACTT CCGGGAGCAT AAATATCTGA CTCCAGGAGT TGGGCAATTC AGGTTCGCAC ACAGTCGAAA AAGAAAATTG
CGCGGTCATG CAAAGTGGAC TTGACAGCCA CGGACCCGAG ATCGCACCCC GTTTTTGCTG AATCATTGAA GAAGCAGTGC GAGCCGGGAG ACTTCAGCAC AGAAATTCTG ATGGCTCAAA
GCAAGCGGGC TGATTCTTGG GACTACAACT AAATTTCCGA TTTATTCTGA GGCACGCTCT GTTCGGATCT GACGATGCGT TGAAGAGTTG AAGAGATATT CCGCTGGCCT CAAGGTCGTA
CGAACCATGA ACAGAGTAGG AAGTCCTTTG AACAGGGAGT CTGGAAACTC TGTGATCAAG ATGGGACGAG CCTACTTCCT CACTGGTATC CTCACTCAAG GCGATATCAG GATGAAAATA
CAAACTTTAG GAAGCAGTGG TCCACATCGA TCGACCGATC AGTCCTTCCT GACTCATAAT GTTATAGGTA GGTACGAATT CTGACCTCAT TTAAGAACCC ATAGAAGCAT ACATCTGTCA
GCCATATCTC TAGGGTTCCA TTACAGATTC AAACTTCAAT TGTATTTCTT TTTCTAAGGG ATTCACTAAC TTCATCATCA GGCCTCATTT ATCACACCCA CACATTATAT AATATCAACA
CACTAAAGAA GAACAGCATC TGCGAGAGAT TGTTTAGCTC CAGTTTAGTA AGCTATCTTG TTATTAGCTC TAGAGTCAAT AGCAGAGCTA TTCAACATGG CCACAGAAGT TTCAGACCTC
CTAATTGAGA TGATTAGGCG TCCTTTTGGG CCGGTCCTAC CGTAGGCCTT CAGCATAGCC ACAGA
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Retrieve as FASTA
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