View Redoxidase 7381

Entry information : Sm2CysPrx02-2_18 (Sm2CysPrx02b_18)

Entry ID	7381
Creation	0000-00-00 (Christophe Dunand)
Last sequence changes	2011-02-23 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2011-02-23 (Christophe Dunand)

Peroxidase information: Sm2CysPrx02-2_18 (Sm2CysPrx02b_18)

Name (synonym)

Sm2CysPrx02-2_18 (Sm2CysPrx02b_18)

Class

Typical 2-Cysteine peroxiredoxin [Orthogroup: 2CysPrx001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella

Organism

Selaginella moellendorffii [TaxId: 88036 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	Sm2CysPrx02-2_18 start..stop	S start..stop
Sm2CysPrx02-1_34	572	0	1..286	1..291
Spol2CysPrx01	323	2.1e-112	62..286	23..251
Nt2CysPrx01-1A	323	5.54e-112	97..286	78..271
Zm2CysPrx01	321	1.96e-111	95..286	65..260

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2038790..2039035	244	N° 2	2039065..2039170	104	N° 3	2039226..2039307	80	N° 4	2039365..2039444	78
N° 5	2039497..2039622	124	N° 6	2039736..2039849	112	N° 7	2039901..2040005	103
join(2038790..2039035,2039065..2039170,2039226..2039307,2039365..2039444,2039497 ..2039622,2039736..2039849,2039901..2040005)

Literature and cross-references Sm2CysPrx02-2_18 (Sm2CysPrx02b_18)

DNA ref.	Phytozome 12: scaffold_18 (2038790..2040005)

Protein sequence: Sm2CysPrx02-2_18 (Sm2CysPrx02b_18)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	286 (321)
PWM (Da):	31502.55 (33379.7)
PI (pH):	8.62 (5.09)	Peptide Signal:	cut: 30 range:30-350

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MALGLGVQAISIASTSLVEEKRGSAIPERQCERVAFARRISPHELLQLCSSRERENAVGVRFRRRKRNVIAAGAPAPPPPSQTIDFDLHKSXQIDRPLVGSMAPNFEAEAVHHQEFIKVK
LSNYIGKKFVVLFFYPLNFTFVCPTELTAFSDRYGEFQKLDTEVLAVSSDSVFSHLAWIQTDRKSGGLGELNYPVVSDLTKAITKAYRVLLPDQGISLRGLFIIDKEGIVQHATINNLAV
GRNVDEALRLVQAVQYVKVHPDELCPAGWQPGEHGIKPDPKHFAAV

Retrieve as FASTA

Remarks

Complete sequence from genomic (6 introns). Frame shift. No EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGCTAGGGTTAGGGGTTCAAGCGATCTCGATTGCTTCTACGTCGCTGGTGGAGGAGAAGCGAGGATCAGCGATTCCGGAGCGCCAGTGCGAGCGCGTAGCATTCGCGAGAAGAATC
TCTCCGCATGAACTTTTGCAGCTATGCTCGTCAAGAGAAAGGGAGAATGCCGTGGGAGTGAGGTTTAGAAGGAGAAAGAGAAATGTGATTGCCGCGGGAGCGCCAGCGCCTCCGCCTCCA
TCGCAGAGGTATGTTTGAATTCCTTTACTTTTTCCAGACTATAGATTTTGACTTGCATAAGTCATNNCAGATAGATCGGCCTTTGGTGGGTAGCATGGCACCAAACTTTGAAGCCGAGGC
TGTCCATCACCAAGAGTTTATCACAAGGTACAAAAATCTCTACATGTTTTCCAAAAACTCGATTTGAGTTTGTTCTTGGCAGGTCAAGCTTTCCAATTACATTGGAAAGAAGTTCGTTGT
TCTTTTCTTCTACCCCCTCAATTTCACCTTCGTTTGCCCGACACAGGTATCTTGCTTTTTCTTTGAAACTTTGTTTCATTCTCTGCGTGTGTGTTTTCAACAGAGCTAACAGCGTTCAGC
GATCGGTACGGTGAGTTTCAAAAGCTCGACACTGAGGTGCTCGCAGTATCATCCGACAGTGTGTAGTAAGCTCAAAATCCATTATCACTGGTTCTGTCCTTGACATTTTCCTTCCAGTTC
TCTCACCTAGCGTGGATCCAAACTGACCGGAAGTCTGGGGGACTTGGGGAACTCAATTACCCAGTTGTTTCGGATCTGACCAAGGCAATCACCAAAGCCTATCGCGTGTTGCTACCCGAC
CCCAGGTCTTTCTATTCACTCACCGATCACACACATAGAACATAAGAGGCAAGGCAAGAACACATTTTTAAGTCTCTCGCAACTACAGATGGCCTTAACCTTTGCATAAAAACCACAGGG
TATTTCCTTGAGAGGATTGTTTATAATCGACAAGGAAGGCATCGTTCAGCATGCTACAATCAACAATCTTGCTGTTGGACGCAACGTTGACGAGGCCCTCAGGCTTGTCCCCAGGTAACT
TCACTCGTTCTATATGTTTCACGTCGACAAAATCGTTTCTTTTAGGCCGTCCAATACGTGAAAGTGCATCCGGACGAGCTATGTCCAGCGGGCTGGCAGCCTGGGGAGCACGGGATTAAA
CCAGATCCAAAGCACTTTGCTGCTGTCT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA