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Entry information : SmRboh03-2_66 (SmRboh03b_66)
Entry ID 7384
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-01 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmRboh03-2_66 (SmRboh03b_66)
Name (synonym) SmRboh03-2_66 (SmRboh03b_66)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh005]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmRboh03-2_66
start..stop		 S start..stop
SmRboh03-1_13 1400 0 87..796 1..693
SmRboh02-2_137 1031 0 29..796 125..902
SmRboh02-1_19 1030 0 29..796 118..895
SmRboh04-1_39 1025 0 16..796 1..788
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 411434..411689 254 N° 2 411744..411906 161 N° 3 411954..412002 47 N° 4 412076..412189 112
N° 5 412238..412645 406 N° 6 412707..413093 385 N° 7 413142..413237 94 N° 8 413287..413402 114
N° 9 413468..413596 127 N° 10 413722..413927 204 N° 11 413956..414104 147 N° 12 414223..414351 127
N° 13 414414..414492 77 N° 14 414551..414660 108  
join(411434..411689,411744..411906,411954..412002,412076..412189,412238..412645, 412707..413093,413142..413237,413287..413402,413468..413596,413722..413927,41395 6..414104,414223..414351,414414..414492,414551..414660)


exon

Literature and cross-references SmRboh03-2_66 (SmRboh03b_66)
DNA ref. Phytozome 12:   scaffold_66 (411434..414660)
Protein sequence: SmRboh03-2_66 (SmRboh03b_66)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   796
PWM (Da):   %s   90859.88 Transmb domain:   %s   o245-267i331-350o385-407i428-450o460-477i595-612o
PI (pH):   %s   9.32
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MELKKVGRNGSSARILPLNFSPDGEGGQLSRSMSGTEYAIEGLRFIEKTIASKNAKSQWEAVELRFHKLANEECRLSRSDFGECIGMSDSKEFAELLFDALARRKGHDELWTASKEELRD
FWLQITDKRFSSRLQTFFDLCDTDLDGRISENEVKIILLSASANKLSFLQEQAEEYAALIMGELDQNKQGYIEVKQLERLMREPIALAEDPSYGYACAPTLHSRRRNRLHLLQRTIKYFA
LDNWQRIWVLCVWFLAMTGLFTWKFIEYKNRAAFKIMGYCVCTAKGAAETLKLNMALVLLPVCRITITSLRSTVFGSILPFNDNINFHKLIAAAILFGVLLHGGTHIACDFPKMANANSR
IFLDTIGHGFHGRQPSFLGILASIEGITGIIMVVLMSIAFLLATHWSRKNIVRLPWPLHRLTGFNAFWYSHHLFILVYALLIIHSVFLFLTPDWLQKTTWIYLSCPLLLYVGERFLRVLR
SRQHRVNIVKAAIHPGNVLALDMTKPPGFKYRSGMYMFLQCPAISPFEWHPFSITSAPDDEFLNVHIRTVGDWTKEMRKMFAKVCLLPLQCLFPKLYIDGPYGAPAQDYRKYDVMLLVGL
GIGATPFISILKDMLNNIKSTEQQSVSFSLLFSSSFLSTYFSKPFDSPRRKSRKSRGPTNAYFYWVTREQGSFEWFKGVMNEVAEIDHKAVIEMHNYLTSVYEEGDARSALIAMVQALHH
TKNGVDIVSGTRARTHFARPNWDKVFARLTATHDNSRGVFYCGPSQVAKELDVLSRKYSQESNTKFIFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (13 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCTCAAGAAGGTGGGGCGCAATGGGAGCTCCGCGCGGATCTTGCCGCTGAATTTCTCCCCGGATGGCGAGGGCGGCCAGCTCTCGAGATCGATGTCCGGCACGGAGTATGCGATC
GAGGGCTTGCGCTTCATCGAGAAGACAATTGCCAGCAAGAACGCAAAGTCTCAGTGGGAGGCTGTGGAGCTTAGATTTCACAAGCTCGCCAACGAGGAGTGTCGGCTTTCACGCTCGGAC
TTTGGGGAATGCATTGTGGTAAGCCAACAAGAAAGAGTTTGATGGAAAAGCTGACGATCGTTAACTACTCAGGAATGAGCGATTCCAAGGAATTTGCGGAGTTGCTGTTTGATGCTCTAG
CCCGGCGGAAAGGCCATGACGAGCTGTGGACCGCTTCGAAGGAAGAACTCCGGGACTTTTGGCTTCAAATCACAGACAAGAGATTTAGCTCTCGATTGCAAACATTTTTTGACTTTTGTA
AGTTGTCCAGTCTTTTCTTTGATTGTTCTAAATTTTATCCATAGGTGTGACACGGATCTGGACGGTCGCATATCAGAAAACGAAGTGAAAGAGAGGTACATATGGAGTTGATTTTACTCC
CTCTGCTTTTGCTCGAGCTAAACTAAAGGAACAAGCCCCGGATTGCAGATAATTCTACTCAGTGCGTCGGCGAACAAGCTCTCGTTTCTGCAAGAGCAAGCTGAAGAATACGCAGCTCTC
ATCATGGGAGAACTCGATCAGAATAAACAAGGATACATTGAGAGGTAAGAAGCTTCCTACCACGCAACCTTTCAACGTTCAACTTATTTCAGGTGAAACAACTTGAACGGTTGATGCGAG
AGCCGATCGCACTCGCTGAGGATCCGTCCTATGGGTACGCGTGTGCTCCAACTTTACACTCTCGAAGAAGAAACCGATTGCATTTACTCCAGAGAACGATCAAGTACTTCGCTCTGGACA
ACTGGCAGCGGATATGGGTGCTGTGCGTGTGGTTTCTCGCCATGACCGGTCTTTTCACCTGGAAGTTCATAGAGTACAAGAACAGAGCCGCTTTTAAGATCATGGGATACTGTGTGTGCA
CGGCCAAGGGCGCTGCGGAGACTTTGAAACTCAACATGGCATTGGTCCTGCTGCCAGTTTGCAGGATCACAATCACGTCCTTACGCTCCACTGTTTTCGGATCCATACTACCTTTCAACG
ACAACATCAACTTTCACAAGAGGTATGACTTCGTTTGTTCCTGTGTTTGTACGCATGCTTACTTACGATGGCCTGTTTTCCAGCTTATTGCTGCAGCGATTTTGTTCGGCGTTTTGCTTC
ACGGAGGAACTCATATTGCTTGTGACTTCCCCAAGATGGCCAACGCAAACAGTCGTATATTTCTTGATACTATTGGGCATGGTTTCCACGGCCGGCAACCATCTTTCCTTGGCATATTGG
CTTCGATTGAGGGGATTACGGGGATTATCATGGTGGTCCTGATGTCAATAGCTTTTCTTCTTGCAACGCACTGGTCCCGCAAGAACATCGTCAGGCTCCCTTGGCCCCTCCACAGGTTAA
CAGGATTCAACGCATTTTGGTACTCGCATCATCTTTTTATTTTGGTCTACGCCTTGCTGATCATACACTCGGTGTTTCTCTTCCTGACCCCAGACTGGCTGCAAAAGACGCGGTACCTAC
ATTATGATCTGATTGACTTCTGATATTTTTTGTACTGCAGACGTGGATATATCTATCCTGTCCATTGCTGCTGTACGTTGGCGAGAGGTTCCTGCGCGTTTTAAGATCGAGGCAGCATCG
AGTCAACATAGTAAAGAGGTAACTTTCCGCAGCAAATTGTCTCTCGCGCTGAAACTTTGTTTCACAGGCAGCAATTCATCCTGGCAACGTTCTTGCCTTGGACATGACGAAACCTCCAGG
CTTCAAGTATCGGAGTGGCATGTACATGTTTCTGCAGTGTCCAGCGATCTCGCCATTCGAGTGTGGTAAAAATCTTTGTGACCCTAGCAAGCAGATTGAAACACTTTTTCTTCTTCTTTT
GTATGGCCAGGCATCCCTTCTCGATCACGTCTGCGCCCGACGACGAGTTTTTAAATGTGCACATACGGACAGTGGGGGACTGGACCAAGGAAATGAGGAAAATGTTTGCAAAGGTTTGTT
TGCTTCCCCTTCAATGCCTCTGTCCTGATCCACAGTTGTGCGTAGGCAGTTGACACTAGCTCTTCCATCGACGATTCACGGTCAGTGATTCCAACAACCAAACGTTTCCGTTAGTCCGCG
GCTGGCTGGCTTACATCTCCTGACAGGTTTCCAAAGCTCTACATTGATGGACCTTATGGCGCTCCTGCTCAGGACTACCGGAAGTATGACGTGATGCTCCTCGTTGGCTTGGGAATCGGA
GCTACACCTTTTATCAGCATCTTAAAGGACATGCTCAACAACATCAAATCCACGGAGCAACAGTCGGTAAGCTTCTCTCTTTTGTTTTCTAGTTCTTTTCTTAGCACAAGTTTTGTGTTG
CTTGCTTGCTCGCAGGACATAGACTTTAGCAAGCCGTTTGATAGCCCGAGAAGAAAGAGCCGCAAGTCTCGTGGCCCAACAAACGCCTACTTCTACTGGGTCACCAGAGAGCAAGGCTCG
TTCGAGTGGTTCAAAGGCGTCATGAATGAGGTGGCCGAAATAGATCACAAGAGGTCAGCCACTCGTCACCAATCTTAAGTCAGCCCCGCAACCACGATAGAAGCTCTTGGTTGATTGCAA
TGCTCAAAAGAAAAGATTTATTGCTGACGTATAAAGTTTTTGCTTCCGCAGGCAGTAATTGAGATGCACAACTACCTCACAAGCGTGTACGAGGAAGGTGACGCGCGCTCGGCTCTCATT
GCAATGGTACAAGCTCTACACCACACCAAAAACGGCGTGGATATCGTCTCGGGCACCCGGGGGTAAAAAACTTTCATCCCCAGAGCTTTCGCTAAGATCTTCTTTTCTTCTTCTTTGTGC
CCAGGCACGCACTCACTTCGCAAGGCCAAACTGGGACAAGGTGTTTGCACGTCTCACTGCTACACACGACAATTCAAGGATAGAGGTAAGAAGAAGAGAAGAAAATGATGAGAGCAAACT
CCACTTACTTTGGTTGTTGTTAGGAGTGTTCTACTGCGGGCCTTCGCAAGTCGCCAAAGAGTTAGATGTGCTGTCCCGGAAGTATTCCCAAGAGTCCAACACCAAATTTATATTCCATAA
GGAGAACTTTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCTCAAGAAGGTGGGGCGCAATGGGAGCTCCGCGCGGATCTTGCCGCTGAATTTCTCCCCGGATGGCGAGGGCGGCCAGCTCTCGAGATCGATGTCCGGCACGGAGTATGCGATC
GAGGGCTTGCGCTTCATCGAGAAGACAATTGCCAGCAAGAACGCAAAGTCTCAGTGGGAGGCTGTGGAGCTTAGATTTCACAAGCTCGCCAACGAGGAGTGTCGGCTTTCACGCTCGGAC
TTTGGGGAATGCATTGGAATGAGCGATTCCAAGGAATTTGCGGAGTTGCTGTTTGATGCTCTAGCCCGGCGGAAAGGCCATGACGAGCTGTGGACCGCTTCGAAGGAAGAACTCCGGGAC
TTTTGGCTTCAAATCACAGACAAGAGATTTAGCTCTCGATTGCAAACATTTTTTGACTTGTGTGACACGGATCTGGACGGTCGCATATCAGAAAACGAAGTGAAAGAGATAATTCTACTC
AGTGCGTCGGCGAACAAGCTCTCGTTTCTGCAAGAGCAAGCTGAAGAATACGCAGCTCTCATCATGGGAGAACTCGATCAGAATAAACAAGGATACATTGAGGTGAAACAACTTGAACGG
TTGATGCGAGAGCCGATCGCACTCGCTGAGGATCCGTCCTATGGGTACGCGTGTGCTCCAACTTTACACTCTCGAAGAAGAAACCGATTGCATTTACTCCAGAGAACGATCAAGTACTTC
GCTCTGGACAACTGGCAGCGGATATGGGTGCTGTGCGTGTGGTTTCTCGCCATGACCGGTCTTTTCACCTGGAAGTTCATAGAGTACAAGAACAGAGCCGCTTTTAAGATCATGGGATAC
TGTGTGTGCACGGCCAAGGGCGCTGCGGAGACTTTGAAACTCAACATGGCATTGGTCCTGCTGCCAGTTTGCAGGATCACAATCACGTCCTTACGCTCCACTGTTTTCGGATCCATACTA
CCTTTCAACGACAACATCAACTTTCACAAGCTTATTGCTGCAGCGATTTTGTTCGGCGTTTTGCTTCACGGAGGAACTCATATTGCTTGTGACTTCCCCAAGATGGCCAACGCAAACAGT
CGTATATTTCTTGATACTATTGGGCATGGTTTCCACGGCCGGCAACCATCTTTCCTTGGCATATTGGCTTCGATTGAGGGGATTACGGGGATTATCATGGTGGTCCTGATGTCAATAGCT
TTTCTTCTTGCAACGCACTGGTCCCGCAAGAACATCGTCAGGCTCCCTTGGCCCCTCCACAGGTTAACAGGATTCAACGCATTTTGGTACTCGCATCATCTTTTTATTTTGGTCTACGCC
TTGCTGATCATACACTCGGTGTTTCTCTTCCTGACCCCAGACTGGCTGCAAAAGACGACGTGGATATATCTATCCTGTCCATTGCTGCTGTACGTTGGCGAGAGGTTCCTGCGCGTTTTA
AGATCGAGGCAGCATCGAGTCAACATAGTAAAGGCAGCAATTCATCCTGGCAACGTTCTTGCCTTGGACATGACGAAACCTCCAGGCTTCAAGTATCGGAGTGGCATGTACATGTTTCTG
CAGTGTCCAGCGATCTCGCCATTCGAGTGGCATCCCTTCTCGATCACGTCTGCGCCCGACGACGAGTTTTTAAATGTGCACATACGGACAGTGGGGGACTGGACCAAGGAAATGAGGAAA
ATGTTTGCAAAGGTTTGTTTGCTTCCCCTTCAATGCCTGTTTCCAAAGCTCTACATTGATGGACCTTATGGCGCTCCTGCTCAGGACTACCGGAAGTATGACGTGATGCTCCTCGTTGGC
TTGGGAATCGGAGCTACACCTTTTATCAGCATCTTAAAGGACATGCTCAACAACATCAAATCCACGGAGCAACAGTCGGTAAGCTTCTCTCTTTTGTTTTCTAGTTCTTTTCTTAGCACA
AGTTACTTTAGCAAGCCGTTTGATAGCCCGAGAAGAAAGAGCCGCAAGTCTCGTGGCCCAACAAACGCCTACTTCTACTGGGTCACCAGAGAGCAAGGCTCGTTCGAGTGGTTCAAAGGC
GTCATGAATGAGGTGGCCGAAATAGATCACAAGGCAGTAATTGAGATGCACAACTACCTCACAAGCGTGTACGAGGAAGGTGACGCGCGCTCGGCTCTCATTGCAATGGTACAAGCTCTA
CACCACACCAAAAACGGCGTGGATATCGTCTCGGGCACCCGGGCACGCACTCACTTCGCAAGGCCAAACTGGGACAAGGTGTTTGCACGTCTCACTGCTACACACGACAATTCAAGGATA
GGAGTGTTCTACTGCGGGCCTTCGCAAGTCGCCAAAGAGTTAGATGTGCTGTCCCGGAAGTATTCCCAAGAGTCCAACACCAAATTTATATTCCATAAGGAGAACTTTTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCTCA AGAAGGTGGG GCGCAATGGG AGCTCCGCGC GGATCTTGCC GCTGAATTTC TCCCCGGATG GCGAGGGCGG CCAGCTCTCG AGATCGATGT CCGGCACGGA GTATGCGATC  GAGGGCTTGC GCTTCATCGA GAAGACAATT GCCAGCAAGA ACGCAAAGTC TCAGTGGGAG GCTGTGGAGC TTAGATTTCA CAAGCTCGCC AACGAGGAGT GTCGGCTTTC ACGCTCGGAC  TTTGGGGAAT GCATTGGAAT GAGCGATTCC AAGGAATTTG CGGAGTTGCT GTTTGATGCT CTAGCCCGGC GGAAAGGCCA TGACGAGCTG TGGACCGCTT CGAAGGAAGA ACTCCGGGAC  TTTTGGCTTC AAATCACAGA CAAGAGATTT AGCTCTCGAT TGCAAACATT TTTTGACTTG TGTGACACGG ATCTGGACGG TCGCATATCA GAAAACGAAG TGAAAGAGAT AATTCTACTC  AGTGCGTCGG CGAACAAGCT CTCGTTTCTG CAAGAGCAAG CTGAAGAATA CGCAGCTCTC ATCATGGGAG AACTCGATCA GAATAAACAA GGATACATTG AGGTGAAACA ACTTGAACGG  TTGATGCGAG AGCCGATCGC ACTCGCTGAG GATCCGTCCT ATGGGTACGC GTGTGCTCCA ACTTTACACT CTCGAAGAAG AAACCGATTG CATTTACTCC AGAGAACGAT CAAGTACTTC  GCTCTGGACA ACTGGCAGCG GATATGGGTG CTGTGCGTGT GGTTTCTCGC CATGACCGGT CTTTTCACCT GGAAGTTCAT AGAGTACAAG AACAGAGCCG CTTTTAAGAT CATGGGATAC  TGTGTGTGCA CGGCCAAGGG CGCTGCGGAG ACTTTGAAAC TCAACATGGC ATTGGTCCTG CTGCCAGTTT GCAGGATCAC AATCACGTCC TTACGCTCCA CTGTTTTCGG ATCCATACTA  CCTTTCAACG ACAACATCAA CTTTCACAAG CTTATTGCTG CAGCGATTTT GTTCGGCGTT TTGCTTCACG GAGGAACTCA TATTGCTTGT GACTTCCCCA AGATGGCCAA CGCAAACAGT  CGTATATTTC TTGATACTAT TGGGCATGGT TTCCACGGCC GGCAACCATC TTTCCTTGGC ATATTGGCTT CGATTGAGGG GATTACGGGG ATTATCATGG TGGTCCTGAT GTCAATAGCT  TTTCTTCTTG CAACGCACTG GTCCCGCAAG AACATCGTCA GGCTCCCTTG GCCCCTCCAC AGGTTAACAG GATTCAACGC ATTTTGGTAC TCGCATCATC TTTTTATTTT GGTCTACGCC  TTGCTGATCA TACACTCGGT GTTTCTCTTC CTGACCCCAG ACTGGCTGCA AAAGACGACG TGGATATATC TATCCTGTCC ATTGCTGCTG TACGTTGGCG AGAGGTTCCT GCGCGTTTTA  AGATCGAGGC AGCATCGAGT CAACATAGTA AAGGCAGCAA TTCATCCTGG CAACGTTCTT GCCTTGGACA TGACGAAACC TCCAGGCTTC AAGTATCGGA GTGGCATGTA CATGTTTCTG  CAGTGTCCAG CGATCTCGCC ATTCGAGTGG CATCCCTTCT CGATCACGTC TGCGCCCGAC GACGAGTTTT TAAATGTGCA CATACGGACA GTGGGGGACT GGACCAAGGA AATGAGGAAA  ATGTTTGCAA AGGTTTGTTT GCTTCCCCTT CAATGCCTGT TTCCAAAGCT CTACATTGAT GGACCTTATG GCGCTCCTGC TCAGGACTAC CGGAAGTATG ACGTGATGCT CCTCGTTGGC  TTGGGAATCG GAGCTACACC TTTTATCAGC ATCTTAAAGG ACATGCTCAA CAACATCAAA TCCACGGAGC AACAGTCGGT AAGCTTCTCT CTTTTGTTTT CTAGTTCTTT TCTTAGCACA  AGTTACTTTA GCAAGCCGTT TGATAGCCCG AGAAGAAAGA GCCGCAAGTC TCGTGGCCCA ACAAACGCCT ACTTCTACTG GGTCACCAGA GAGCAAGGCT CGTTCGAGTG GTTCAAAGGC  GTCATGAATG AGGTGGCCGA AATAGATCAC AAGGCAGTAA TTGAGATGCA CAACTACCTC ACAAGCGTGT ACGAGGAAGG TGACGCGCGC TCGGCTCTCA TTGCAATGGT ACAAGCTCTA  CACCACACCA AAAACGGCGT GGATATCGTC TCGGGCACCC GGGCACGCAC TCACTTCGCA AGGCCAAACT GGGACAAGGT GTTTGCACGT CTCACTGCTA CACACGACAA TTCAAGGATA 
GGAGTGTTCT ACTGCGGGCC TTCGCAAGTC GCCAAAGAGT TAGATGTGCT GTCCCGGAAG TATTCCCAAG AGTCCAACAC CAAATTTATA TTCCATAAGG AGAACTTTTA G 

Retrieve as FASTA