View Redoxidase 7384

Entry information : SmRboh03-2_66 (SmRboh03b_66)

Entry ID	7384
Creation	0000-00-00 (Christophe Dunand)
Last sequence changes	2010-06-01 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2011-01-25 (Toky Ramarohetra (Scipio))

Peroxidase information: SmRboh03-2_66 (SmRboh03b_66)

Name (synonym)

SmRboh03-2_66 (SmRboh03b_66)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh005]

Taxonomy

Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella

Organism

Selaginella moellendorffii [TaxId: 88036 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SmRboh03-2_66 start..stop	S start..stop
SmRboh03-1_13	1400	0	87..796	1..693
SmRboh02-2_137	1031	0	29..796	125..902
SmRboh02-1_19	1030	0	29..796	118..895
SmRboh04-1_39	1025	0	16..796	1..788

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7384' 'join(411434..411689,411744..411906,411954..412002,412076..412189,412238..412645,412707..413093,413142..413237,413287..413402,413468..413596,413722..413927,413956..414104,414223..414351,414414..414492,414551..414660)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	411434..411689	254	N° 2	411744..411906	161	N° 3	411954..412002	47	N° 4	412076..412189	112
N° 5	412238..412645	406	N° 6	412707..413093	385	N° 7	413142..413237	94	N° 8	413287..413402	114
N° 9	413468..413596	127	N° 10	413722..413927	204	N° 11	413956..414104	147	N° 12	414223..414351	127
N° 13	414414..414492	77	N° 14	414551..414660	108
join(411434..411689,411744..411906,411954..412002,412076..412189,412238..412645, 412707..413093,413142..413237,413287..413402,413468..413596,413722..413927,41395 6..414104,414223..414351,414414..414492,414551..414660)

Literature and cross-references SmRboh03-2_66 (SmRboh03b_66)

DNA ref.	Phytozome 12: scaffold_66 (411434..414660)

Protein sequence: SmRboh03-2_66 (SmRboh03b_66)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	796
PWM (Da):	90859.88	Transmb domain:	o245-267i331-350o385-407i428-450o460-477i595-612o
PI (pH):	9.32

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MELKKVGRNGSSARILPLNFSPDGEGGQLSRSMSGTEYAIEGLRFIEKTIASKNAKSQWEAVELRFHKLANEECRLSRSDFGECIGMSDSKEFAELLFDALARRKGHDELWTASKEELRD
FWLQITDKRFSSRLQTFFDLCDTDLDGRISENEVKIILLSASANKLSFLQEQAEEYAALIMGELDQNKQGYIEVKQLERLMREPIALAEDPSYGYACAPTLHSRRRNRLHLLQRTIKYFA
LDNWQRIWVLCVWFLAMTGLFTWKFIEYKNRAAFKIMGYCVCTAKGAAETLKLNMALVLLPVCRITITSLRSTVFGSILPFNDNINFHKLIAAAILFGVLLHGGTHIACDFPKMANANSR
IFLDTIGHGFHGRQPSFLGILASIEGITGIIMVVLMSIAFLLATHWSRKNIVRLPWPLHRLTGFNAFWYSHHLFILVYALLIIHSVFLFLTPDWLQKTTWIYLSCPLLLYVGERFLRVLR
SRQHRVNIVKAAIHPGNVLALDMTKPPGFKYRSGMYMFLQCPAISPFEWHPFSITSAPDDEFLNVHIRTVGDWTKEMRKMFAKVCLLPLQCLFPKLYIDGPYGAPAQDYRKYDVMLLVGL
GIGATPFISILKDMLNNIKSTEQQSVSFSLLFSSSFLSTYFSKPFDSPRRKSRKSRGPTNAYFYWVTREQGSFEWFKGVMNEVAEIDHKAVIEMHNYLTSVYEEGDARSALIAMVQALHH
TKNGVDIVSGTRARTHFARPNWDKVFARLTATHDNSRGVFYCGPSQVAKELDVLSRKYSQESNTKFIFHKENF

Retrieve as FASTA

Remarks

Complete sequence from genomic (13 introns). No EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGAGCTCAAGAAGGTGGGGCGCAATGGGAGCTCCGCGCGGATCTTGCCGCTGAATTTCTCCCCGGATGGCGAGGGCGGCCAGCTCTCGAGATCGATGTCCGGCACGGAGTATGCGATC
GAGGGCTTGCGCTTCATCGAGAAGACAATTGCCAGCAAGAACGCAAAGTCTCAGTGGGAGGCTGTGGAGCTTAGATTTCACAAGCTCGCCAACGAGGAGTGTCGGCTTTCACGCTCGGAC
TTTGGGGAATGCATTGTGGTAAGCCAACAAGAAAGAGTTTGATGGAAAAGCTGACGATCGTTAACTACTCAGGAATGAGCGATTCCAAGGAATTTGCGGAGTTGCTGTTTGATGCTCTAG
CCCGGCGGAAAGGCCATGACGAGCTGTGGACCGCTTCGAAGGAAGAACTCCGGGACTTTTGGCTTCAAATCACAGACAAGAGATTTAGCTCTCGATTGCAAACATTTTTTGACTTTTGTA
AGTTGTCCAGTCTTTTCTTTGATTGTTCTAAATTTTATCCATAGGTGTGACACGGATCTGGACGGTCGCATATCAGAAAACGAAGTGAAAGAGAGGTACATATGGAGTTGATTTTACTCC
CTCTGCTTTTGCTCGAGCTAAACTAAAGGAACAAGCCCCGGATTGCAGATAATTCTACTCAGTGCGTCGGCGAACAAGCTCTCGTTTCTGCAAGAGCAAGCTGAAGAATACGCAGCTCTC
ATCATGGGAGAACTCGATCAGAATAAACAAGGATACATTGAGAGGTAAGAAGCTTCCTACCACGCAACCTTTCAACGTTCAACTTATTTCAGGTGAAACAACTTGAACGGTTGATGCGAG
AGCCGATCGCACTCGCTGAGGATCCGTCCTATGGGTACGCGTGTGCTCCAACTTTACACTCTCGAAGAAGAAACCGATTGCATTTACTCCAGAGAACGATCAAGTACTTCGCTCTGGACA
ACTGGCAGCGGATATGGGTGCTGTGCGTGTGGTTTCTCGCCATGACCGGTCTTTTCACCTGGAAGTTCATAGAGTACAAGAACAGAGCCGCTTTTAAGATCATGGGATACTGTGTGTGCA
CGGCCAAGGGCGCTGCGGAGACTTTGAAACTCAACATGGCATTGGTCCTGCTGCCAGTTTGCAGGATCACAATCACGTCCTTACGCTCCACTGTTTTCGGATCCATACTACCTTTCAACG
ACAACATCAACTTTCACAAGAGGTATGACTTCGTTTGTTCCTGTGTTTGTACGCATGCTTACTTACGATGGCCTGTTTTCCAGCTTATTGCTGCAGCGATTTTGTTCGGCGTTTTGCTTC
ACGGAGGAACTCATATTGCTTGTGACTTCCCCAAGATGGCCAACGCAAACAGTCGTATATTTCTTGATACTATTGGGCATGGTTTCCACGGCCGGCAACCATCTTTCCTTGGCATATTGG
CTTCGATTGAGGGGATTACGGGGATTATCATGGTGGTCCTGATGTCAATAGCTTTTCTTCTTGCAACGCACTGGTCCCGCAAGAACATCGTCAGGCTCCCTTGGCCCCTCCACAGGTTAA
CAGGATTCAACGCATTTTGGTACTCGCATCATCTTTTTATTTTGGTCTACGCCTTGCTGATCATACACTCGGTGTTTCTCTTCCTGACCCCAGACTGGCTGCAAAAGACGCGGTACCTAC
ATTATGATCTGATTGACTTCTGATATTTTTTGTACTGCAGACGTGGATATATCTATCCTGTCCATTGCTGCTGTACGTTGGCGAGAGGTTCCTGCGCGTTTTAAGATCGAGGCAGCATCG
AGTCAACATAGTAAAGAGGTAACTTTCCGCAGCAAATTGTCTCTCGCGCTGAAACTTTGTTTCACAGGCAGCAATTCATCCTGGCAACGTTCTTGCCTTGGACATGACGAAACCTCCAGG
CTTCAAGTATCGGAGTGGCATGTACATGTTTCTGCAGTGTCCAGCGATCTCGCCATTCGAGTGTGGTAAAAATCTTTGTGACCCTAGCAAGCAGATTGAAACACTTTTTCTTCTTCTTTT
GTATGGCCAGGCATCCCTTCTCGATCACGTCTGCGCCCGACGACGAGTTTTTAAATGTGCACATACGGACAGTGGGGGACTGGACCAAGGAAATGAGGAAAATGTTTGCAAAGGTTTGTT
TGCTTCCCCTTCAATGCCTCTGTCCTGATCCACAGTTGTGCGTAGGCAGTTGACACTAGCTCTTCCATCGACGATTCACGGTCAGTGATTCCAACAACCAAACGTTTCCGTTAGTCCGCG
GCTGGCTGGCTTACATCTCCTGACAGGTTTCCAAAGCTCTACATTGATGGACCTTATGGCGCTCCTGCTCAGGACTACCGGAAGTATGACGTGATGCTCCTCGTTGGCTTGGGAATCGGA
GCTACACCTTTTATCAGCATCTTAAAGGACATGCTCAACAACATCAAATCCACGGAGCAACAGTCGGTAAGCTTCTCTCTTTTGTTTTCTAGTTCTTTTCTTAGCACAAGTTTTGTGTTG
CTTGCTTGCTCGCAGGACATAGACTTTAGCAAGCCGTTTGATAGCCCGAGAAGAAAGAGCCGCAAGTCTCGTGGCCCAACAAACGCCTACTTCTACTGGGTCACCAGAGAGCAAGGCTCG
TTCGAGTGGTTCAAAGGCGTCATGAATGAGGTGGCCGAAATAGATCACAAGAGGTCAGCCACTCGTCACCAATCTTAAGTCAGCCCCGCAACCACGATAGAAGCTCTTGGTTGATTGCAA
TGCTCAAAAGAAAAGATTTATTGCTGACGTATAAAGTTTTTGCTTCCGCAGGCAGTAATTGAGATGCACAACTACCTCACAAGCGTGTACGAGGAAGGTGACGCGCGCTCGGCTCTCATT
GCAATGGTACAAGCTCTACACCACACCAAAAACGGCGTGGATATCGTCTCGGGCACCCGGGGGTAAAAAACTTTCATCCCCAGAGCTTTCGCTAAGATCTTCTTTTCTTCTTCTTTGTGC
CCAGGCACGCACTCACTTCGCAAGGCCAAACTGGGACAAGGTGTTTGCACGTCTCACTGCTACACACGACAATTCAAGGATAGAGGTAAGAAGAAGAGAAGAAAATGATGAGAGCAAACT
CCACTTACTTTGGTTGTTGTTAGGAGTGTTCTACTGCGGGCCTTCGCAAGTCGCCAAAGAGTTAGATGTGCTGTCCCGGAAGTATTCCCAAGAGTCCAACACCAAATTTATATTCCATAA
GGAGAACTTTTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGAGCTCAAGAAGGTGGGGCGCAATGGGAGCTCCGCGCGGATCTTGCCGCTGAATTTCTCCCCGGATGGCGAGGGCGGCCAGCTCTCGAGATCGATGTCCGGCACGGAGTATGCGATC
GAGGGCTTGCGCTTCATCGAGAAGACAATTGCCAGCAAGAACGCAAAGTCTCAGTGGGAGGCTGTGGAGCTTAGATTTCACAAGCTCGCCAACGAGGAGTGTCGGCTTTCACGCTCGGAC
TTTGGGGAATGCATTGGAATGAGCGATTCCAAGGAATTTGCGGAGTTGCTGTTTGATGCTCTAGCCCGGCGGAAAGGCCATGACGAGCTGTGGACCGCTTCGAAGGAAGAACTCCGGGAC
TTTTGGCTTCAAATCACAGACAAGAGATTTAGCTCTCGATTGCAAACATTTTTTGACTTGTGTGACACGGATCTGGACGGTCGCATATCAGAAAACGAAGTGAAAGAGATAATTCTACTC
AGTGCGTCGGCGAACAAGCTCTCGTTTCTGCAAGAGCAAGCTGAAGAATACGCAGCTCTCATCATGGGAGAACTCGATCAGAATAAACAAGGATACATTGAGGTGAAACAACTTGAACGG
TTGATGCGAGAGCCGATCGCACTCGCTGAGGATCCGTCCTATGGGTACGCGTGTGCTCCAACTTTACACTCTCGAAGAAGAAACCGATTGCATTTACTCCAGAGAACGATCAAGTACTTC
GCTCTGGACAACTGGCAGCGGATATGGGTGCTGTGCGTGTGGTTTCTCGCCATGACCGGTCTTTTCACCTGGAAGTTCATAGAGTACAAGAACAGAGCCGCTTTTAAGATCATGGGATAC
TGTGTGTGCACGGCCAAGGGCGCTGCGGAGACTTTGAAACTCAACATGGCATTGGTCCTGCTGCCAGTTTGCAGGATCACAATCACGTCCTTACGCTCCACTGTTTTCGGATCCATACTA
CCTTTCAACGACAACATCAACTTTCACAAGCTTATTGCTGCAGCGATTTTGTTCGGCGTTTTGCTTCACGGAGGAACTCATATTGCTTGTGACTTCCCCAAGATGGCCAACGCAAACAGT
CGTATATTTCTTGATACTATTGGGCATGGTTTCCACGGCCGGCAACCATCTTTCCTTGGCATATTGGCTTCGATTGAGGGGATTACGGGGATTATCATGGTGGTCCTGATGTCAATAGCT
TTTCTTCTTGCAACGCACTGGTCCCGCAAGAACATCGTCAGGCTCCCTTGGCCCCTCCACAGGTTAACAGGATTCAACGCATTTTGGTACTCGCATCATCTTTTTATTTTGGTCTACGCC
TTGCTGATCATACACTCGGTGTTTCTCTTCCTGACCCCAGACTGGCTGCAAAAGACGACGTGGATATATCTATCCTGTCCATTGCTGCTGTACGTTGGCGAGAGGTTCCTGCGCGTTTTA
AGATCGAGGCAGCATCGAGTCAACATAGTAAAGGCAGCAATTCATCCTGGCAACGTTCTTGCCTTGGACATGACGAAACCTCCAGGCTTCAAGTATCGGAGTGGCATGTACATGTTTCTG
CAGTGTCCAGCGATCTCGCCATTCGAGTGGCATCCCTTCTCGATCACGTCTGCGCCCGACGACGAGTTTTTAAATGTGCACATACGGACAGTGGGGGACTGGACCAAGGAAATGAGGAAA
ATGTTTGCAAAGGTTTGTTTGCTTCCCCTTCAATGCCTGTTTCCAAAGCTCTACATTGATGGACCTTATGGCGCTCCTGCTCAGGACTACCGGAAGTATGACGTGATGCTCCTCGTTGGC
TTGGGAATCGGAGCTACACCTTTTATCAGCATCTTAAAGGACATGCTCAACAACATCAAATCCACGGAGCAACAGTCGGTAAGCTTCTCTCTTTTGTTTTCTAGTTCTTTTCTTAGCACA
AGTTACTTTAGCAAGCCGTTTGATAGCCCGAGAAGAAAGAGCCGCAAGTCTCGTGGCCCAACAAACGCCTACTTCTACTGGGTCACCAGAGAGCAAGGCTCGTTCGAGTGGTTCAAAGGC
GTCATGAATGAGGTGGCCGAAATAGATCACAAGGCAGTAATTGAGATGCACAACTACCTCACAAGCGTGTACGAGGAAGGTGACGCGCGCTCGGCTCTCATTGCAATGGTACAAGCTCTA
CACCACACCAAAAACGGCGTGGATATCGTCTCGGGCACCCGGGCACGCACTCACTTCGCAAGGCCAAACTGGGACAAGGTGTTTGCACGTCTCACTGCTACACACGACAATTCAAGGATA
GGAGTGTTCTACTGCGGGCCTTCGCAAGTCGCCAAAGAGTTAGATGTGCTGTCCCGGAAGTATTCCCAAGAGTCCAACACCAAATTTATATTCCATAAGGAGAACTTTTAG

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGAGCTCA AGAAGGTGGG GCGCAATGGG AGCTCCGCGC GGATCTTGCC GCTGAATTTC TCCCCGGATG GCGAGGGCGG CCAGCTCTCG AGATCGATGT CCGGCACGGA GTATGCGATC GAGGGCTTGC GCTTCATCGA GAAGACAATT GCCAGCAAGA ACGCAAAGTC TCAGTGGGAG GCTGTGGAGC TTAGATTTCA CAAGCTCGCC AACGAGGAGT GTCGGCTTTC ACGCTCGGAC TTTGGGGAAT GCATTGGAAT GAGCGATTCC AAGGAATTTG CGGAGTTGCT GTTTGATGCT CTAGCCCGGC GGAAAGGCCA TGACGAGCTG TGGACCGCTT CGAAGGAAGA ACTCCGGGAC TTTTGGCTTC AAATCACAGA CAAGAGATTT AGCTCTCGAT TGCAAACATT TTTTGACTTG TGTGACACGG ATCTGGACGG TCGCATATCA GAAAACGAAG TGAAAGAGAT AATTCTACTC AGTGCGTCGG CGAACAAGCT CTCGTTTCTG CAAGAGCAAG CTGAAGAATA CGCAGCTCTC ATCATGGGAG AACTCGATCA GAATAAACAA GGATACATTG AGGTGAAACA ACTTGAACGG TTGATGCGAG AGCCGATCGC ACTCGCTGAG GATCCGTCCT ATGGGTACGC GTGTGCTCCA ACTTTACACT CTCGAAGAAG AAACCGATTG CATTTACTCC AGAGAACGAT CAAGTACTTC GCTCTGGACA ACTGGCAGCG GATATGGGTG CTGTGCGTGT GGTTTCTCGC CATGACCGGT CTTTTCACCT GGAAGTTCAT AGAGTACAAG AACAGAGCCG CTTTTAAGAT CATGGGATAC TGTGTGTGCA CGGCCAAGGG CGCTGCGGAG ACTTTGAAAC TCAACATGGC ATTGGTCCTG CTGCCAGTTT GCAGGATCAC AATCACGTCC TTACGCTCCA CTGTTTTCGG ATCCATACTA CCTTTCAACG ACAACATCAA CTTTCACAAG CTTATTGCTG CAGCGATTTT GTTCGGCGTT TTGCTTCACG GAGGAACTCA TATTGCTTGT GACTTCCCCA AGATGGCCAA CGCAAACAGT CGTATATTTC TTGATACTAT TGGGCATGGT TTCCACGGCC GGCAACCATC TTTCCTTGGC ATATTGGCTT CGATTGAGGG GATTACGGGG ATTATCATGG TGGTCCTGAT GTCAATAGCT TTTCTTCTTG CAACGCACTG GTCCCGCAAG AACATCGTCA GGCTCCCTTG GCCCCTCCAC AGGTTAACAG GATTCAACGC ATTTTGGTAC TCGCATCATC TTTTTATTTT GGTCTACGCC TTGCTGATCA TACACTCGGT GTTTCTCTTC CTGACCCCAG ACTGGCTGCA AAAGACGACG TGGATATATC TATCCTGTCC ATTGCTGCTG TACGTTGGCG AGAGGTTCCT GCGCGTTTTA AGATCGAGGC AGCATCGAGT CAACATAGTA AAGGCAGCAA TTCATCCTGG CAACGTTCTT GCCTTGGACA TGACGAAACC TCCAGGCTTC AAGTATCGGA GTGGCATGTA CATGTTTCTG CAGTGTCCAG CGATCTCGCC ATTCGAGTGG CATCCCTTCT CGATCACGTC TGCGCCCGAC GACGAGTTTT TAAATGTGCA CATACGGACA GTGGGGGACT GGACCAAGGA AATGAGGAAA ATGTTTGCAA AGGTTTGTTT GCTTCCCCTT CAATGCCTGT TTCCAAAGCT CTACATTGAT GGACCTTATG GCGCTCCTGC TCAGGACTAC CGGAAGTATG ACGTGATGCT CCTCGTTGGC TTGGGAATCG GAGCTACACC TTTTATCAGC ATCTTAAAGG ACATGCTCAA CAACATCAAA TCCACGGAGC AACAGTCGGT AAGCTTCTCT CTTTTGTTTT CTAGTTCTTT TCTTAGCACA AGTTACTTTA GCAAGCCGTT TGATAGCCCG AGAAGAAAGA GCCGCAAGTC TCGTGGCCCA ACAAACGCCT ACTTCTACTG GGTCACCAGA GAGCAAGGCT CGTTCGAGTG GTTCAAAGGC GTCATGAATG AGGTGGCCGA AATAGATCAC AAGGCAGTAA TTGAGATGCA CAACTACCTC ACAAGCGTGT ACGAGGAAGG TGACGCGCGC TCGGCTCTCA TTGCAATGGT ACAAGCTCTA CACCACACCA AAAACGGCGT GGATATCGTC TCGGGCACCC GGGCACGCAC TCACTTCGCA AGGCCAAACT GGGACAAGGT GTTTGCACGT CTCACTGCTA CACACGACAA TTCAAGGATA
GGAGTGTTCT ACTGCGGGCC TTCGCAAGTC GCCAAAGAGT TAGATGTGCT GTCCCGGAAG TATTCCCAAG AGTCCAACAC CAAATTTATA TTCCATAAGG AGAACTTTTA G

Retrieve as FASTA