Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
245 |
PWM (Da): |
26133.69 |
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PI (pH):
| 10.12 |
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Sequence 388
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MALVSVSLVPSSRGALVSTSATAVSGSRPRKVWLPHFPRAAASNPALVASKSSVFGRRLALGAVGAGVAAQIAWGAGKAFASTATKEKSIHDFTVKNIDGKDIDLSMYKGKVLLVVNIASQCGLTSGNYKELVEVHKKYKDGFEVLAFPCNQFGGQEPGTNEEIKQFACTRYKAEFPIFDVDVNGPSTAPVYQFLKSSKGGLLGDSIKWNFGKFLVNKDGQVVERYAPTTSPFQIEGDIKKLL* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (5 introns) and 24 ESTs. Incorrect prediction from JGI (5' and last exon are missing). Unigene compiles ESTs from both haplotypes. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGCTTGTCTCGGTATCGCTCGTGCCCTCGTCGCGTGGAGCTCTCGTCTCCACATCGGCCACAGCTGTCTCTGGATCCAGGCCTCGCAAGGTTTGGCTCCCGCATTTCCCTCGAGCT GCCGCCTCGAATCCGGCGCTGGTAGCGTCGAAATCGAGCGTGTTTGGGAGGAGATTGGCCCTTGGCGCTGTTGGAGCTGGCGTTGCAGCTCAGATTGCTTGGGGCGCGGGGAAGGCGTTT GCTTCCACGGCGACCAAGGAGAAATCCATCCACGATTTCACTGTCAAGGTATGGACGGGTCGATTTGATGTTCGGGATTTTGATGATTTGGTAAGACATTAGAATATCGATGGGAAAGAC ATAGATTTGAGCATGTACAAGGGGAAAGTTCTACTCGTTGTCAACATTGCTTCTCAATGGTGTGTGCTATAAACGTTTGAAAGCATCGGTTTTGACAAGGTTTTCTTTCTTTTTCTTATG ATGTTTCCAGTGGATTGACTTCCGGGAACTATAAAGAATTGGTAGAGGTTCACAAGAAATACAAAGACCAAGGTAAGCTGTAAGCTACAAAATAAAACACTGCTCTTTCTTGTCTCTTGT CTCAGGCTTTGAGGTTTTAGCATTTCCATGCAACCAGTTTGGTGGCCAGGAACCAGGAACTAATGAGGAAATCAAGCAGTTTGCGTGCACCAGATACAAGGCAGAGTTTCCAATCTTCGA CAAGGTAACTGCTTAAAGCGTTTTTTTTCCCTTCTCTAAGTCGTTTTTTTGCGATGAAGGTGGATGTGAATGGGCCATCGACAGCTCCAGTTTATCAATTCCTCAAGAGCAGCAAAGGCG GATTGCTGGGCGATAGCATCAAATGGAATTTCGGTAAATTTCTAGTGAACAAAGATGGGCAAGTTGTGGAAAGATATGCTCCCACCACTTCTCCCTTCCAGATCGAGGTAAGAACTCTTC CTGATTTTTTTGTCTTTTCTCTCTAAACTATTGTCCTCCACAGGGCGACATTAAGAAGCTGCTATAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGCTTGTCTCGGTATCGCTCGTGCCCTCGTCGCGTGGAGCTCTCGTCTCCACATCGGCCACAGCTGTCTCTGGATCCAGGCCTCGCAAGGTTTGGCTCCCGCATTTCCCTCGAGCT GCCGCCTCGAATCCGGCGCTGGTAGCGTCGAAATCGAGCGTGTTTGGGAGGAGATTGGCCCTTGGCGCTGTTGGAGCTGGCGTTGCAGCTCAGATTGCTTGGGGCGCGGGGAAGGCGTTT GCTTCCACGGCGACCAAGGAGAAATCCATCCACGATTTCACTGTCAAGAATATCGATGGGAAAGACATAGATTTGAGCATGTACAAGGGGAAAGTTCTACTCGTTGTCAACATTGCTTCT CAATGTGGATTGACTTCCGGGAACTATAAAGAATTGGTAGAGGTTCACAAGAAATACAAAGACCAAGGCTTTGAGGTTTTAGCATTTCCATGCAACCAGTTTGGTGGCCAGGAACCAGGA ACTAATGAGGAAATCAAGCAGTTTGCGTGCACCAGATACAAGGCAGAGTTTCCAATCTTCGACAAGGTGGATGTGAATGGGCCATCGACAGCTCCAGTTTATCAATTCCTCAAGAGCAGC AAAGGCGGATTGCTGGGCGATAGCATCAAATGGAATTTCGGTAAATTTCTAGTGAACAAAGATGGGCAAGTTGTGGAAAGATATGCTCCCACCACTTCTCCCTTCCAGATCGAGGGCGAC ATTAAGAAGCTGCTATAA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCTCGATCCA TGGCGCTTGT CTCGGTATCG CTCGTGCCCT CGTCGCGTGG AGCTCTCGTC TCCACATCGG CCACAGCTGT CTCTGGATCC AGGCCTCGCA AGGTTTGGCT CCCGCATTTC
CCTCGAGCTG CCGCCTCGAA TCCGGCGCTG GTAGCGTCGA AATCGAGCGT GTTTGGGAGG AGATTGGCCC TTGGCGCTGT TGGAGCTGGC GTTGCAGCTC AGATTGCTTG GGGCGCGGGG
AAGGCGTTTG CTTCCACGGC GACCAAGGAG AAATCCATCC ACGATTTCAC TGTCAAGAAT ATCGATGGGA AAGACATAGA TTTGAGCATG TACAAGGGGA AAGTTCTACT CGTTGTCAAC
ATTGCTTCTC AATGTGGATT GACTTCCGGG AACTATAAAG AATTGGTAGA GGTTCACAAG AAATACAAAG ACCAAGGCTT TGAGGTTTTA GCATTTCCAT GCAACCAGTT TGGTGGCCAG
GAACCAGGAA CTAATGAGGA AATCAAGCAG TTTGCGTGCA CCAGATACAA GGCAGAGTTT CCAATCTTCG ACAAGGTGGA TGTGAATGGG CCATCGACAG CTCCAGTTTA TCAATTCCTC
AAGAGCAGCA AAGGCGGATT GCTGGGCGAT AGCATCAAAT GGAATTTCGG TAAATTTCTA GTGAACAAAG ATGGGCAAGT TGTGGAAAGA TATGCTCCCA CCACTTCTCC CTTCCAGATC
GAGGGCGACA TTAAGAAGCT GCTATAAnAT TCTA
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Retrieve as FASTA
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