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Entry information : SmGPx03-1_40 (SmGPx03a_40)
Entry ID 7407
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmGPx03-1_40 (SmGPx03a_40)
Name (synonym) SmGPx03-1_40 (SmGPx03a_40)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmGPx03-1_40
start..stop		 S start..stop
SmGPx03-2_107 495 0 1..245 1..245
LuGPx140 289 1.21e-99 40..245 39..242
ZaGPx04 287 6.74e-99 45..245 42..242
WnoGPx01 287 7.19e-99 51..245 50..241
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1392069..1392356 286 N° 2 1392411..1392487 75 N° 3 1392558..1392619 60 N° 4 1392673..1392791 117
N° 5 1392845..1393012 166 N° 6 1393068..1393091 22  
join(1392069..1392356,1392411..1392487,1392558..1392619,1392673..1392791,1392845 ..1393012,1393068..1393091)


exon

Literature and cross-references SmGPx03-1_40 (SmGPx03a_40)
DNA ref. Phytozome 12:   scaffold_40 (1392069..1393091)
mRNA ref. JGI transcript:   228619
EST ref. GenBank:   FE495237.1
Cluster/Prediction ref. UniGene:   Smo.1088
Protein sequence: SmGPx03-1_40 (SmGPx03a_40)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   245
PWM (Da):   %s   26061.65 Transmb domain:   %s   i2-24o
PI (pH):   %s   10.12
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALVSASLVPSSRGALVSTSATAVSGSRPRKVWLPHFPRAAASNPALVASKSSVFGRRLALGAVGAGVAAQIAWGAGKAFASTATKEKSIHDFTVKNIDGKDIDLSTYKGKVLLVVNIAS
QCGLTSGNYKELVEVHKKYKDGFEVLAFPCNQFGGQEPGSNEEIKQFACTRYKAEFPIFDVDVNGPSTAPVYQFLKSSKGGLLGDSIKWNFGKFLVNKDGQVVERYAPTTSPFQIEGDIK
KLL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns) and 26 ESTs. Unigene compiles ESTs from both haplotypes.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCTTGTCTCGGCATCGCTCGTGCCCTCGTCGCGTGGAGCTCTCGTCTCCACATCGGCCACAGCTGTCTCTGGATCCAGGCCTCGCAAGGTTTGGCTCCCGCATTTCCCTCGAGCT
GCCGCCTCGAATCCGGCGCTGGTAGCGTCGAAATCGAGCGTGTTTGGGAGGAGATTGGCCCTTGGCGCTGTTGGAGCTGGCGTTGCAGCTCAGATTGCTTGGGGCGCGGGGAAGGCGTTT
GCTTCCACGGCGACCAAGGAGAAATCCATCCACGATTTCACCGTCAAGAGGTATGGATGGGTCGATTTGATGTTCGGGATTTTGATGATTTGGTAATACATTAGAATATCGATGGGAAAG
ACATTGATTTGAGCACGTACAAGGGGAAAGTTCTACTCGTTGTCAACATTGCTTCTCAATGTGGTGTGGGCTATAAACGTTTGAAAGCATCGGTTTGACAAGGTTTTCTTTCTTTTTCTT
ATGATGTTTCCAGTGGATTGACTTCCGGGAACTATAAAGAATTGGTAGAAGTTCACAAGAAATACAAAGACCAAGAGGTAAGCTGTAAGCTACAAAATAAAACACTGCTCTTTCTTGTCT
CTTGTCTCAGGCTTTGAGGTTTTAGCATTTCCATGCAACCAGTTTGGTGGTCAGGAACCAGGATCTAATGAGGAAATCAAGCAGTTTGCGTGCACCAGATACAAGGCAGAGTTTCCAATC
TTCGACAAGAGGTAACTGCTTAAAGCGTTTTTTCCCTTCTCTAAGTCGTTTTTTTGCGATGAAGGTGGATGTGAATGGGCCATCGACAGCTCCAGTTTATCAATTCCTCAAGAGCAGCAA
AGGCGGATTGCTGGGCGATAGCATCAAATGGAATTTCGGTAAATTTCTAGTGAACAAAGATGGGCAAGTTGTGGAAAGATATGCTCCCACCACTTCTCCCTTCCAGATCGAGAGGTAAGA
ACTCTTCCTGATTTTTGGTCTTTTCTCTCTAAACTATTGTCCTCCACAGGGCGACATTAAGAAGCTGCTATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCTTGTCTCGGCATCGCTCGTGCCCTCGTCGCGTGGAGCTCTCGTCTCCACATCGGCCACAGCTGTCTCTGGATCCAGGCCTCGCAAGGTTTGGCTCCCGCATTTCCCTCGAGCT
GCCGCCTCGAATCCGGCGCTGGTAGCGTCGAAATCGAGCGTGTTTGGGAGGAGATTGGCCCTTGGCGCTGTTGGAGCTGGCGTTGCAGCTCAGATTGCTTGGGGCGCGGGGAAGGCGTTT
GCTTCCACGGCGACCAAGGAGAAATCCATCCACGATTTCACCGTCAAGAATATCGATGGGAAAGACATTGATTTGAGCACGTACAAGGGGAAAGTTCTACTCGTTGTCAACATTGCTTCT
CAATGTGGATTGACTTCCGGGAACTATAAAGAATTGGTAGAAGTTCACAAGAAATACAAAGACCAAGGCTTTGAGGTTTTAGCATTTCCATGCAACCAGTTTGGTGGTCAGGAACCAGGA
TCTAATGAGGAAATCAAGCAGTTTGCGTGCACCAGATACAAGGCAGAGTTTCCAATCTTCGACAAGGTGGATGTGAATGGGCCATCGACAGCTCCAGTTTATCAATTCCTCAAGAGCAGC
AAAGGCGGATTGCTGGGCGATAGCATCAAATGGAATTTCGGTAAATTTCTAGTGAACAAAGATGGGCAAGTTGTGGAAAGATATGCTCCCACCACTTCTCCCTTCCAGATCGAGGGCGAC
ATTAAGAAGCTGCTATAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGATTATGCG TTGTGGAGCT CGATCCATGG CGCTTGTCTC GGCATCGCTC GTGCCCTCGT CGCGTGGAGC TCTCGTCTCC ACATCGGCCA CAGCTGTCTC TGGATCCAGG CCTCGCAAGG  TTTGGCTCCC GCATTTCCCT CGAGCTGCCG CCTCGAATCC GGCGCTGGTA GCGTCGAAAT CGAGCGTGTT TGGGAGGAGA TTGGCCCTTG GCGCTGTTGG AGCTGGCGTT GCAGCTCAGA  TTGCTTGGGG CGCGGGGAAG GCGTTTGCTT CCACGGCGAC CAAGGAGAAA TCCATCCACG ATTTCACCGT CAAGAATATC GATGGGAAAG ACATTGATTT GAGCACGTAC AAGGGGAAAG  TTCTACTCGT TGTCAACATT GCTTCTCAAT GTGGATTGAC TTCCGGGAAC TATAAAGAAT TGGTAGAAGT TCACAAGAAA TACAAAGACC AAGGCTTTGA GGTTTTAGCA TTTCCATGCA  ACCAGTTTGG TGGTCAGGAA CCAGGATCTA ATGAGGAAAT CAAGCAGTTT GCGTGCACCA GATACAAGGC AGAGTTTCCA ATCTTCGACA AGGTGGATGT GAATGGGCCA TCGACAGCTC  CAGTTTATCA ATTCCTCAAG AGCAGCAAAG GCGGATTGCT GGGCGATAGC ATCAAATGGA ATTTCGGTAA ATTTCTAGTG AACAAAGATG GGCAAGTTGT GGAAAGATAT GCTCCCACCA  CTTCTCCCTT CCAGATCGAG GGCGACATTA AGAAGCTGCT ATAAAATTCT AAACAGAGGT TTTGGTGTAA ATCCGATTGT GAGCATAATT AAGGAGCATG CGACTCTACT CCTACATGCA 
TGCAATTCAG TTCATTCTAG AAGTACGGAA GAACTTACTT TTTGAGAAAC CTTTAAACAT GGAGTGTCCA TAGACTGTT 

Retrieve as FASTA