Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
196 |
PWM (Da): |
22484.38 |
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PI (pH):
| 5.2 |
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Sequence 339
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAGDEEIVNMREPAYTFASIYEIDVRDKHGQKVSMSKYRDKVLLIVNVATKSACASSMYKELNELHVKYVDGLEILAFPCNQFAAQEPLRTEYLQETVSSRFGPHFPLFEVDVNGPNTAVLFRYLKDKSDGDRIRWNFTKFLINRTGGIAGRYAPHIPPYKLEEDIKSLLAVELPFEEEKRKNAAKEEEQEEEP* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (5 introns). No EST. Incorrect prediction from JGI (no PS, last exon is missing) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGGGCGACGAAGAGATCGTGAACATGAGGGAGCCGGCCTATACTTTCGCCAGCATCTATGAGATCGATGTTAGGGTATGCTTCCTCCATCCAACTCGCGTTTGTTTTCATAGATCG ATTGGTGATCACAGGACAAACACGGCCAAAAAGTTTCCATGAGTAAATACAGAGACAAGGTTCTTTTGATCGTCAATGTCGCCACAAAATCGTGTGTATCTCCTGTTCTCGATTGATTGC ATTCTCCATTTCTCATATGATCCATCCAGGGCGTGTGCTTCAAGCATGTACAAGGAGCTCAACGAGCTCCACGTAAAATACGTGGACGAAGGTTCTTTTGATCTTGTGTTTCTTTCTCTG GGATCCTCCAAACTATAGCTTCGATTGCAGTCGTGATTCGCCAGGGCTAGAGATTTTGGCATTCCCGTGCAACCAATTCGCTGCGCAAGAGCCACTCAGGACGGAATATCTTCAAGAGAC AGTCTCTTCTCGATTTGGGCCACACTTCCCACTCTTTGAAAGGGTACGAGAGATTTCTCACTGAGAATTGGATCCAATTCGAACACTTGATCGAGAATTTTGACGATGTTTGATCCACAG
GTGGATGTAAATGGCCCAAACACCGCAGTTCTCTTCAGGTACCTCAAGGACAAGAGCGATGGCGATCGAATTCGCTGGAATTTCACAAAGTTTTTGATCAATCGAACTGGTGGAATTGCT GGGAGATACGCCCCTCACATACCACCATACAAATTGGAGGTTGGCTCTTCCCATTCTAGCATTTCTTCATCAATTTTCTTTGACATCAGGAAGATATCAAGAGCCTCTTGGCTGTGGAGC TCCCATTTGAGGAAGAAAAGAGAAAGAATGCCGCCAAGGAAGAAGAACAGGAGGAAGAACCCTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGGGCGACGAAGAGATCGTGAACATGAGGGAGCCGGCCTATACTTTCGCCAGCATCTATGAGATCGATGTTAGGGACAAACACGGCCAAAAAGTTTCCATGAGTAAATACAGAGAC AAGGTTCTTTTGATCGTCAATGTCGCCACAAAATCGGCGTGTGCTTCAAGCATGTACAAGGAGCTCAACGAGCTCCACGTAAAATACGTGGACGAAGGGCTAGAGATTTTGGCATTCCCG TGCAACCAATTCGCTGCGCAAGAGCCACTCAGGACGGAATATCTTCAAGAGACAGTCTCTTCTCGATTTGGGCCACACTTCCCACTCTTTGAAAGGGTGGATGTAAATGGCCCAAACACC GCAGTTCTCTTCAGGTACCTCAAGGACAAGAGCGATGGCGATCGAATTCGCTGGAATTTCACAAAGTTTTTGATCAATCGAACTGGTGGAATTGCTGGGAGATACGCCCCTCACATACCA CCATACAAATTGGAGGAAGATATCAAGAGCCTCTTGGCTGTGGAGCTCCCATTTGAGGAAGAAAAGAGAAAGAATGCCGCCAAGGAAGAAGAACAGGAGGAAGAACCCTAA |
Retrieve as FASTA
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