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Entry information : SmGPx04-2_61 (SmGPx04b_61)
Entry ID 7409
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmGPx04-2_61 (SmGPx04b_61)
Name (synonym) SmGPx04-2_61 (SmGPx04b_61)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2010]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmGPx04-2_61
start..stop		 S start..stop
SmGPx04-1_19 386 1.41e-139 1..196 1..196
SmGPx02-2_57 184 4.01e-60 17..172 7..166
SmGPx02-1_0 183 9.29e-60 17..172 7..166
HbGPx02 181 9.39e-59 16..173 5..165
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7409' 'join(601996..602073,602130..602206,602265..602326,602400..602518,602596..602754,602805..602900)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 601996..602073 76 N° 2 602130..602206 75 N° 3 602265..602326 60 N° 4 602400..602518 117
N° 5 602596..602754 157 N° 6 602805..602900 94  
join(601996..602073,602130..602206,602265..602326,602400..602518,602596..602754, 602805..602900)


exon

Literature and cross-references SmGPx04-2_61 (SmGPx04b_61)
DNA ref. Phytozome 12:   scaffold_61 (601996..602900)
mRNA ref. JGI transcript:   119990
Protein sequence: SmGPx04-2_61 (SmGPx04b_61)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   196 (295)
PWM (Da):   %s   22510.28 (31826.0)  
PI (pH):   %s   4.73 (8.99) Peptide Signal:   %s   cut: 29 range:29-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGDEEIVNMREPDYTPASIYEIDVRDKHGQKVSMSKYRDKGLLIVNVATMSAFASSMYKELNELHVKYVDGLEILAFPCNQFAAQEPLRTEYLQETVSSRFGPHFPLFEVDVNGPNTAVLFRYLKDKSDGDRIRWNFTKFLINRTGGIAGRYAPHIPP
YKLEEDIKSLLAVELPFEEEKRKNAPEEEEQEEEP*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGGCGACGAAGAGATCGTGAACATGAGGGAGCCGGACTATACTCCCGCCAGCATCTATGAGATCGATGTTAGGGGGTATTCTTCCTCCATCCAACTCGCGTTTGTTTTCATAGAT
CGATTGGTGATCACAGGACAAACACGGCCAAAAAGTTTCCATGAGCAAATACAGAGACAAGGGTCTTTTGATCGTCAATGTCGCCACAATGTCTCGTGCGTATCTCCTGTTCTCGATTGA
TTGCATTTTCCATTCCTCATATGATCCATCCAGGGCGTTTGCTTCAAGCATGTACAAGGAGCTCAACGAGCTCCACGTAAAATACGTGGACGAAGAGGTTCTTTTGATCTTGTGTTTCTT
TCTCTGGGATCCTCCAAACTATAGCTTCGATTGCAGTCGTGATTCGCCAGGGCTAGAGATTTTGGCATTCCCGTGCAACCAATTCGCTGCGCAAGAGCCACTCAGGACGGAATATCTTCA
AGAGACAGTCTCTTCTCGATTTGGGCCACACTTCCCACTCTTTGAAAGGGGGTACGAGAGATTTCTCACTGAGAATAGGATCCAATTCGAACACTTGATCGAGAATTTTGACGATGTTTG
ATCCACAGGTGGATGTAAATGGCCCAAACACCGCAGTTCTCTTCAGGTACCTCAAGGACAAGAGCGATGGCGATCGAATTCGCTGGAATTTCACAAAGTTTTTGATCAATCGAACTGGTG
GAATTGCTGGGAGATACGCCCCTCACATACCACCATACAAATTGGAGAGGTTGGTTCTTCCCATTCTAGCATTTCTTCATCAATTTTCTTTGACATCAGGAAGATATCAAGAGCCTCTTG
GCTGTGGAGCTCCCATTTGAGGAAGAAAAGAGAAAGAATGCCCCCGAGGAAGAAGAACAGGAGGAAGAACCCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGGCGACGAAGAGATCGTGAACATGAGGGAGCCGGACTATACTCCCGCCAGCATCTATGAGATCGATGTTAGGGACAAACACGGCCAAAAAGTTTCCATGAGCAAATACAGAGAC
AAGGGTCTTTTGATCGTCAATGTCGCCACAATGTCGGCGTTTGCTTCAAGCATGTACAAGGAGCTCAACGAGCTCCACGTAAAATACGTGGACGAAGGGCTAGAGATTTTGGCATTCCCG
TGCAACCAATTCGCTGCGCAAGAGCCACTCAGGACGGAATATCTTCAAGAGACAGTCTCTTCTCGATTTGGGCCACACTTCCCACTCTTTGAAAGGGTGGATGTAAATGGCCCAAACACC
GCAGTTCTCTTCAGGTACCTCAAGGACAAGAGCGATGGCGATCGAATTCGCTGGAATTTCACAAAGTTTTTGATCAATCGAACTGGTGGAATTGCTGGGAGATACGCCCCTCACATACCA
CCATACAAATTGGAGGAAGATATCAAGAGCCTCTTGGCTGTGGAGCTCCCATTTGAGGAAGAAAAGAGAAAGAATGCCCCCGAGGAAGAAGAACAGGAGGAAGAACCCTAA

Retrieve as FASTA