The peroxidases and oxidases database
Entry information : SbAPx07 (Sobic.006G084400.1[2.1] / Sb06g017080[1.4])
Entry ID 7416
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2014-08-04 (Messaoudi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-10-15 (Christophe Dunand)
Peroxidase information: SbAPx07 (Sobic.006G084400.1[2.1] / Sb06g017080[1.4])
Name (synonym) SbAPx07 (Sobic.006G084400.1[2.1] / Sb06g017080[1.4])
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SbAPx07
start..stop		 S start..stop
ZmAPx07 579 0 34..344 32..339
SiAPx05 568 0 1..344 1..342
BdiAPx07 553 0 46..344 46..345
TaAPx02-1B 550 0 47..344 47..348
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46255670..46255843 174 N° 2 46255428..46255544 117 N° 3 46253583..46253703 121 N° 4 46253393..46253493 101
N° 5 46253222..46253309 88 N° 6 46252731..46252798 68 N° 7 46252554..46252640 87 N° 8 46252074..46252148 75
N° 9 46251917..46251994 78 N° 10 46251725..46251829 105 N° 11 46251527..46251547 21  
complement(join(46251527..46251547,46251725..46251829,46251917..46251994,4625207 4..46252148,46252554..46252640,46252731..46252798,46253222..46253309,46253393..4 6253493,46253583..46253703,46255428..46255544,46255670..46255843))


exon

Literature and cross-references SbAPx07 (Sobic.006G084400.1[2.1] / Sb06g017080[1.4])
DNA ref. Phytozome 12:   chromosome_6 (46255843..46251527)
EST ref. GenBank:   BE356878.1 [5' end]
Protein sequence: SbAPx07 (Sobic.006G084400.1[2.1] / Sb06g017080[1.4])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   344
PWM (Da):   %s   37156.01  
PI (pH):   %s   9.21
Sequence 607
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAERLAASAATLRASAAAAATPSARRAARASRAFFPPSPASSARARVGLRAAPSPLPQKARAVRCAAVAAASDVAQVKAAREDIRELLRTTHCHPILVRLGWHDAGTYDKNIEEWPQRGGANGSLRFDVELKHGANAGLINALKLIQPIKDKYPSITYADLFQLASATAIEAGGPKIPMKYGRVDVTGPEQCPPEGKLPDAGPSSPADHLREVFYRMGLDDEIVALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTVEWLRFDNSYFKDIKEKRDQDLLVLPTDAALFEDPNFKVYAEKYAEDQDAFFSDYAEAHAKLSNLGAKFQPPQGFSLDD*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, 10 introns) and 3 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGAGCGCCTCGCCGCATCCGCCGCCACCCTCCGCGCCTCGGCCGCCGCCGCCGCCACCCCGTCCGCGCGCCGCGCGGCGCGGGCCAGCCGCGCGTTCTTCCCGCCCTCGCCGGCG
TCGTCAGCTCGCGCGCGCGTTGGCCTCCGCGCCGCGCCGTCTCCGCTCCCGCAGGTCCGTGTACCGCCTCCGTTACGTATCTGATAGGGCGGGTGCGCCTTGATCTTGAGATCGAAATGG
TGCAGCAGCAGCAGCATACAGGCTGTTGACTCGTGTTTACGTGTGTTGTGTGATCGCAGAAGGCGAGGGCAGTGAGGTGCGCGGCTGTGGCGGCGGCGTCTGACGTGGCTCAGGTGAAGG
CCGCGCGCGAGGACATCAGGGAGCTTCTCAGGACGACTCACTGCCACCCCATCCTGGTGCGTACGGTGACCCTTGTTCTGCGCTTTAAATTACGTTATTCATAAACTTCGTCAATTATGA
ATTCATGATGGTGATTTAGGATTTGACTAACCCCTTTGCGAGCTTACCATCACACTGCTACATTTTTTTTAAAAAAGGAGAATTAACTCTGCTTTTCAGAAAGCAATAAGGTTTTACACA
CTGGGGATACCAGTTTACCAAAGCGAGTACAAAAAAGACAGCCAGCCACCTTGCTGAGCTACAAAGCTAAAGATAGAGTAGAAAACTTATTACAATCACACTGCTACAGTAGAAGATGCA
AGGCTTTAAATTATGATCTTACTATGCTAAGATCACTGTTGGTGAACATAGTGGTAGTGATCACTTTTAATAACTCTGTTAGTGATGTCCATTCTTATATGCCTCTGCAGCATATGGTTT
GTGAGCAGACCAAGCAGGGTGCCCGTTTTGTGCCTGTTACCATGTAATCCACTATTCACTGTTGAGCAGTGGTGGATCCAGAAAAAAAATGTTACTAGGGCCACTTCTACTAGAACATGG
GTCATTGCTCGGTTATAAATGATTTCCCTAGTTATGCTTAGAGATTTAATTAGCGCTTGCAACAAAGTGAATGGTTTCACTTGACACCAATGAGTGTATGCTGGAGCTGGCTCTTTTGTA
GCCCATATAGGCAAGCAAATAAGATTCGACATGAGTGGTTGGTTTGTTGTGAAATGGTATGAAATGTGTGAGAAAATTTACCATTACGAATTTCAAAAGACTTAGTGGTATGCTAGGGAA
GTTTGTTTGCTCATAAGATGGTATTAACTAATTCAAAGGGAATTGGCCAGTTCAAACTTAACGATGTAGTAATGACTAACGGTACTATGTTGATGAAGGGCATCATCCAATGCACGCTTC
AGGGTTATGTCAGAGTCTATTCATTTATTATGCTGCATTTTTAATCATTTTACATTTGCATGATCATATGACTTTTTGTCTTAAGTTTTAGAGGTTAAAGATACAACAGGACCGCCATTT
GTTGAGATAAGAGCATCTTCAGGTGTTTGGTATAATTTACTTGCTAAACTAATAGAGCTAGCAAATTAACAGAAGAATAGCAATCTTAAATTTTGTCCATCTCCAACATTCTCTTCCTAA
ACGATTTCACATTGGGAACCTGAACTATTTCTAACTAACAAAACCCTTTTTGTGTGTCTTACCACTTTCTCATCTGGAATCCTTTATTTTCTTAATTTACGCATGCGTCCAATTTACTCC
TATCTCCCGAGAAAAAAGCTGGGTGGGGAGCTGATATGGAATTCTTCTCGACTGCTAGTTGGAGAGAATATTTGGCAACTTTTTACTTTTAAGGACCTCTTTTACCAAACTGTTAGACAC
TTTTTTTCTTTTTTGCTAAAATATTAAAACAAGGAGTTGTTTTACAAAACTCCTGCTGAATGAATTTCTGTGTATTTCGATTCAGCTAACAAATGCAATGCTCCCTCCGTTCCAAATTAT
AAGTCACTTTGACTTTTTTGTACATCGATTTTGCCATGTATCTGGATATAACATATGTCTAGATACATAACAAATTTTATGTACCAGAAAAGTCAAAGCGACTTATAATTTGGAATAGAG
GGAGTATTTTCTAAGACATATATGTATGGAGTCAGGTTACCTTTGGTCTTCAGTTTCTGTATGCAAGATGACTTATTGTTATATGTTTGATTGGATGAAGGTACGTCTAGGATGGCATGA
TGCTGGTACATATGACAAGAATATTGAGGAGTGGCCACAACGAGGTGGAGCTAATGGAAGCTTAAGATTTGATGTTGAGTTGAAACATGGAGCCAATGCTGGTACTGTTACTCAACTTCT
CTCAGTATCATTGTTTTATTCTTCTAAAGTGTGCTATTAGTAATTGCAATCTCTGATTGGAATTTATAAGGTCTGATAAATGCTCTAAAGCTTATCCAACCAATTAAGGACAAGTACCCG
AGTATCACTTATGCAGATCTATTTCAGTTGGCAAGTGCTACAGCAATTGAGGTCTGACCTTTCCCTCATTGAAGTAGGCTATGTTATTTTTAATCATATGCTACCATGTTAAATACGACT
CAATTTCACTCCAGGAAGCTGGTGGCCCAAAGATTCCGATGAAATACGGACGAGTTGATGTTACAGGACCTGAGCAGTGCCCACCTGAAGGGAAGCTTCCTGGTTAGTAGAATTCCATGG
GCTTTGCAGTGTTCTTCATCCAGTACCAATGCCCTTTGTTAGTTTGCAGGGAAGAATTTAGATGCCAAAGATATACTTAGAGATTTCCCTTATCTGCTGGGAATATCAACAGGCTATGTT
CTGTTCCCAGGGAATCACGTCCTGGAACCGTTCCGGCCAGGAACACTTATATAATTTGTATAGGCCAGACTTCACCAGGAATCATTCCCAGCAGGAATGACCCGAACCAAACGAGCCCTA
AATGTATTTCACATTTTTTCAGAAATCACGGGAATACCTCCGCTGCCACATTGGTGTCAGAAAACTGTTGCTGTGTAGAGGGGAATAGATGCACCAGCATATAAGCCAATTCCACTAATC
TGATGCCTGCCAAATCTCAAGTTTTATTTATCTTGTGTTTCACAGATGCTGGCCCAAGTTCACCTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTGATGACAAGGTGTGCA
GATCGCAACACTTAACCCATTGCAGTATATGTGTCTAATTGACTTTGTTGAGCTGTTTGGAATTCTAATTATTGTGTTTGTAGGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAA
GGTCCAGGCCTGAACGGAGTGGCTGGGGGAAACCAGAAACAAAATATACTGTATGTTCTTATCTTCTTTATGTGAACATCAGTTGTTCTTTTCTGCAGGAAGTCTGTTTTGAGCATGATC
TGTTCCATCCAATTTGTCTTGATCATGGATTGCATTGCATTTATAATTTTGCAATAAGAGGAACATTGCAATTTCTTAATGCTTTGGTACATTGCACCTGCACAGCTCCAAGGATTGTCT
TTAACCTTTCTGGGATGCTTTTGTGCAATATTTATGTACCGACTAAGTTCTGTGCATCATGTATTGTCTCTTCATCTTCTTAATTCGCTCGCTTGACTTATATATAAATCCTCTCCAGAC
CATTGAAACATTGGGACATGAATTATGTGAATATAAATTGGGCTTGTCTTGTTAATCGTGTGAGTTCATCTACCATGTCTTGTTACTCTTTACAGAAAAATGGTCCTGGTGCACCTGGTG
GGCAATCATGGACAGTTGAGTGGCTGAGATTTGATAACAGTTACTTCAAGGTGCGTGCCTTTTGCCACATACTACATGCTGAAAAATCGATCCGAGTTCATCATCTCTTATCTGGTACCA
ATACTTCAGGATATCAAAGAGAAACGAGATCAGGATCTTCTGGTCCTACCTACAGATGCTGCTTTATTTGAGGACCCAAACTTCAAGGTGATCTCTGATGATCAACTGTATGATGTTGGT
ATCCTATGAAATTAATCGTTGAGCTTACTGTATGGGAATCCACAACACAACCAGGTCTATGCGGAGAAATATGCAGAGGACCAAGACGCATTCTTCAGTGACTACGCTGAGGCTCATGCT
AAACTGAGCAATTTGGGTGCGAAGTTCCAACCACCGCAGGTTAGTGTTAACATTTTTGTCCTTAGTTTTCTTACAAGTACACTTTGCTCTTCATTAAAACGGCAATTTAATTGGTTCTGG
GAAGGAAACTGGCTGCTCAAAAATCATTGTTTTTTTTTCTTTTTTCTCAAACAAGTTGGGGCAACCTTATCGTCCTTTTTAATATTGATTCTGCAGGGATTCTCTTTGGATGATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGAGCGCCTCGCCGCATCCGCCGCCACCCTCCGCGCCTCGGCCGCCGCCGCCGCCACCCCGTCCGCGCGCCGCGCGGCGCGGGCCAGCCGCGCGTTCTTCCCGCCCTCGCCGGCG
TCGTCAGCTCGCGCGCGCGTTGGCCTCCGCGCCGCGCCGTCTCCGCTCCCGCAGAAGGCGAGGGCAGTGAGGTGCGCGGCTGTGGCGGCGGCGTCTGACGTGGCTCAGGTGAAGGCCGCG
CGCGAGGACATCAGGGAGCTTCTCAGGACGACTCACTGCCACCCCATCCTGGTACGTCTAGGATGGCATGATGCTGGTACATATGACAAGAATATTGAGGAGTGGCCACAACGAGGTGGA
GCTAATGGAAGCTTAAGATTTGATGTTGAGTTGAAACATGGAGCCAATGCTGGTCTGATAAATGCTCTAAAGCTTATCCAACCAATTAAGGACAAGTACCCGAGTATCACTTATGCAGAT
CTATTTCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGCCCAAAGATTCCGATGAAATACGGACGAGTTGATGTTACAGGACCTGAGCAGTGCCCACCTGAAGGGAAGCTTCCT
GATGCTGGCCCAAGTTCACCTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTGATGACAAGGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
CGGAGTGGCTGGGGGAAACCAGAAACAAAATATACTAAAAATGGTCCTGGTGCACCTGGTGGGCAATCATGGACAGTTGAGTGGCTGAGATTTGATAACAGTTACTTCAAGGATATCAAA
GAGAAACGAGATCAGGATCTTCTGGTCCTACCTACAGATGCTGCTTTATTTGAGGACCCAAACTTCAAGGTCTATGCGGAGAAATATGCAGAGGACCAAGACGCATTCTTCAGTGACTAC
GCTGAGGCTCATGCTAAACTGAGCAATTTGGGTGCGAAGTTCCAACCACCGCAGGGATTCTCTTTGGATGATTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCCGAGCGCC TCGCCGCATC CGCCGCCACC CTCCGCGCCT CGGCCGCCGC CGCCGCCACC CCGTCCGCGC GCCGCGCGGC GCGGGCCAGC CGCGCGTTCT TCCCGCCCTC GCCGGCGTCG  TCGGCTCGCG CGCGCGTTGG CCTCCGCGCC GCGCCGTCTC CGCTCCCGCA GAAGGCGAGG GCAGTGAGGT GCGCGGCTGT GGCGGCGGCG TCTGACGTGG CTCAGGTGAA GGCCGCGCGC  GAGGACATCA GGGAGCTTCT CAGGACGACT CACTGCCACC CCATCCTGGT ACGTCTAGGA TGGCATGATG CTGGTACATA TGACAAGAAT ATTGAGGAGT GGCCACAACG AGGTGGAGCT  AATGGAAGCT TAAGATTTGA TGTTGAGTTG AAACATGGAG CCAATGCTGG TCTGATAAAT GCTCTAAAGC TTATCCAACC AATTAAGGAC AAGTACCCGA GTATCACTTA TGCAGATCTA  TTTCAGTTGG CAAGTGCTAC AGCAATTGAG GACGGAGTGG CTGGGGGAAA CCAGAAACAA AATATACTAA AAATGGTCCT GGTGCACCTG GTGGGCAATC ATGGACAGTT GAGTGGCTGA  GATTTGATAA CAGTTACTTC AAGGATATCA AAGAGAAACG AGATCAGGAT CTTCTGGTCC TACCTACAGA TGCTGCTTTA TTTGAGGACC CAAAGTTCAA GGTCTATGCG GAGAAATATG  CAGAGGACCA AGACGCATTC TTCAGTGACT ACGCTGAAGC GCATGCTAAA CTGAGCAATT TGGGTGCGAA GTTCCAACCA CCGCAGGGAT TCTCTTTGGA TGATTAGTGC AGCAACAGAG  CTCCAGTCCG TGAAACAGGA AAATGCTGTC CTTGAACAGG ATCAAGATTC AAGAGGAAAC ATACAATTCA TTGCTCTTCT CATATCATCA TCGTACAAGA TGGACTGGTC CCCGGCTTTC 
CATGATGCTA TATATGAGTC TTCCAATTTA GCAAGATTTT GGAACCATCG AGCTTGCAAA TAAAAGAACT GACACAGTGA CACTACATAA ATAATATCAG AGCCATTGTG 

Retrieve as FASTA