Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
233 (274) |
PWM (Da): |
23623.51 (29180.8) |
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PI (pH):
| 8.73 (8.68) |
Peptide Signal:
| cut: 25 range:25-298 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MATSALVALS ATTAAAAAGK RILLSRPTAA ASSLSFASRR LAAAAGPLRG LLGAPIRAVA SSASAPPKTI AVGDRLPDAT LSYFDTSSPD GELKTVTVRD LTAGKKVVLF AVPGAFTPTC
TQKHLPGFVA KAGELRAKGV DAVACVSVND AFVMRAWKES LGIGDEVLLL SDGNGELARA MGVELDLSDK PVGLGVRSRR YALLAEDGVV KVLNLEEGGA FTNSSAEDML SAL
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 10, and 21 ESTs. Incorrect prediction from Phytozome (no ATG in the genomic: extra "g"). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCAACCT CCGCCCTCGT CGCTCTGTCC GCCACCACGG CCGCCGCCGC CGCCGGGAAG CGCATCCTCC TCTCGCGCCC CACCGCCGCC GCCTCCTCCC TCTCCTTCGC CTCCCGCCGC
CTGGCTGCCG CCGCGGGGCC CCTCCGGGGG CTCCTCGGCG CGCCAATCCG GGCCGTGGCG TCGTCGGCGT CGGCGCCCCC CAAGACCATC GCGGTTGGGG ACCGGCTCCC TGACGCGACG
CTGTCCTACT TCGACACCTC CTCCCCCGAC GGCGAGCTGA AGACGGTGAC GGTCCGCGAC CTCACCGCGG GGAAGAAGGT GGTGCTCTTC GCGGTGCCCG GCGCGTTCAC GCCCACCTGC
ACCCAGAAGC ACCTCCCGGG CTTCGTGGCC AAGGCCGGGG AGCTCCGCGC CAAGGGCGTC GACGCCGTCG CCTGCGTCTC CGTCAACGAC GCCTTCGTGA TGCGCGCGTG GAAGGAGAGC
CTGGGAATCG GCGACGAGGT GCTGCTGCTG TCCGACGGCA ACGGGGAGCT GGCGCGCGCC ATGGGCGTCG AGCTCGACCT CTCCGACAAG CCCGTCGGGC TCGGCGTCCG CTCCCGCCGC
TACGCGCTGC TCGCGGAGGA CGGCGTCGTC AAGGTGCTCA ACCTCGAGGA GGGCGGCGCG TTCACCAACA GCAGCGCCGA GGACATGCTC AGCGCGCTCT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCAACCT CCGCCCTCGT CGCTCTGTCC GCCACCACGG CCGCCGCCGC CGCCGGGAAG CGCATCCTCC TCTCGCGCCC CACCGCCGCC GCCTCCTCCC TCTCCTTCGC CTCCCGCCGC
CTGGCTGCCG CCGCGGGGCC CCTCCGGGGG CTCCTCGGCG CGCCAATCCG GGCCGTGGCG TCGTCGGCGT CGGCGCCCCC CAAGACCATC GCGGTTGGGG ACCGGCTCCC TGACGCGACG
CTGTCCTACT TCGACACCTC CTCCCCCGAC GGCGAGCTGA AGACGGTGAC GGTCCGCGAC CTCACCGCGG GGAAGAAGGT GGTGCTCTTC GCGGTGCCCG GCGCGTTCAC GCCCACCTGC
ACCCAGAAGC ACCTCCCGGG CTTCGTGGCC AAGGCCGGGG AGCTCCGCGC CAAGGGCGTC GACGCCGTCG CCTGCGTCTC CGTCAACGAC GCCTTCGTGA TGCGCGCGTG GAAGGAGAGC
CTGGGAATCG GCGACGAGGT GCTGCTGCTG TCCGACGGCA ACGGGGAGCT GGCGCGCGCC ATGGGCGTCG AGCTCGACCT CTCCGACAAG CCCGTCGGGC TCGGCGTCCG CTCCCGCCGC
TACGCGCTGC TCGCGGAGGA CGGCGTCGTC AAGGTGCTCA ACCTCGAGGA GGGCGGCGCG TTCACCAACA GCAGCGCCGA GGACATGCTC AGCGCGCTCT GA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AAAAAAAAAA GTCAAAACAG AAACCTCCAG TCCAGCTGCA ACAGGCCATT TCCTCGACCG CATCGCCGCC CGTGCGCTCC GCCTCCATGG CAACCTCCGC CCTCGTCGCT CTGTCCGCCA
CCACGGCCGC CGCCGCCGCC GGGAAGCGCA TCCTCCTCTC GCGCCCCACC GCCGCCGCCT CCTCCCTCTC CTTCGCCTCC CGCCGCCTGG CTGCCGCCGC GGGGCCCCTC CGGGGGCTCC
TCGGCGCGCC AATCCGGGCC GTGGCGTCGT CGGCGTCGGC GCCCCCCAAG ACCATCGCGG TTGGGGACCG GCTCCCTGAC GCGACGCTGT CCTACTTCGA CACCTCCTCC CCCGACGGCG
AGCTGAAGAC GGTGACGGTC CGCGACCTCA CCGCGGGGAA GAAGGTGGTG CTCTTCGCGG TGCCCGGCGC GTTCACGCCC ACCTGCACCC AGAAGCACCT CCCGGGCTTC GTGGCCAAGG
CCGGGGAGCT CCGCGCCAAG GGCGTCGACG CCGTCGCCTG CGTCTCCGTC AACGACGCCT TCGTGATGCG CGCGTGGAAG GAGAGCCTGG GAATCGGCGA CGAGGTGCTG CTGCTGTCCG
ACGGCAACGG GGAGCTGGCG CGCGCCATGG GCGTCGAGCT CGACCTCTCC GACAAGCCCG TCGGGCTCGG CGTCCGCTCC CGCCGCTACG CGCTGCTCGC GGAGGACGGC GTCGTCAAGG
TGCTCAACCT CGAGGAGGGC GGCGCGTTCA CCAACAGCAG CGCCGAGGAC ATGCTCAGCG CGCTCTGAGT TTGCCACGCG CCGACGCCAC GGTTGGGTTC GTCGTCTCAA TCCCGGCAAA
AAGTTAGTTT TTTTTTTTCG TTTCTGAATA ATCGTGACGG CAACGGTGGC TTGTTCCTGC CGCCACTGTG TTGTTGTGAT CGGCGCTGTT ACTAGTGCAC TGCACTGCAG AGATGCAAGT
TTGTTGCGAA CATGGCAGTA GTATAGGTAT AGATTCCTGC AATTGTGGAC GCCCTCTGTT TCATTCATGG CTTGTCATGG TATGCTACAC TTGTCTGAGA ATTGCTCATA GTACCACTAC
TATCACAGGC GTTCAGTGTG TTCAGTGTTC TTATCAAAGA GAAGGGGCGG CACAGCCGCA GTAT
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Retrieve as FASTA
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