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Entry information : PpaPrxII06 (PpaPrxIIF)
Entry ID 7424
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2010-06-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: PpaPrxII06 (PpaPrxIIF)
Name (synonym) PpaPrxII06 (PpaPrxIIF)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrxII06
start..stop		 S start..stop
MpPrxII04 262 1.26e-90 10..198 14..195
LuPrxII119 265 1.6e-90 1..195 55..252
AlyPrxII06 259 2.28e-89 1..195 1..198
AtPrxII06 257 1.83e-88 1..195 1..198
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 679770..679976 205 N° 2 679300..679329 28 N° 3 678943..679101 157 N° 4 678686..678780 93
N° 5 678452..678557 104  
complement(join(678452..678557,678686..678780,678943..679101,679300..679329,6797 70..679976))


exon

Literature and cross-references PpaPrxII06 (PpaPrxIIF)
DNA ref. Phytozome 12:   scaffold_31 (679976..678452)
Cluster/Prediction ref. UniGene:   Ppa.14871
Protein sequence: PpaPrxII06 (PpaPrxIIF)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   198
PWM (Da):   %s   21576.04 Transmb domain:   %s   i7-26o
PI (pH):   %s   9.37
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAFMVRQRGQGLWKNAMAMGQQYMQLRQMGSAAKKIDLESDVALQEARTWDEGVSTKFSTTPVSEIFKGKKVAIFGLPGAFTGVCSQKHVPSFLNNSDKLKSKGIDSIVCVSVNDPYTM
NAWAEKLGAKDKIKFYGDFDGKFHKSLGLDLDLSGALLGPRSQRYAAVVEDGKIKQLNVEEVPSDFKVSDAETLLKGL

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns) and 61 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCTTTCATGGTGAGGCAGCGAGGGCAGGGGCTGTGGAAGAATGCGATGGCCATGGGCCAGCAGTACATGCAGCTTCGGCAGATGGGCTCGGCCGCTAAGAAGATCGATCTAGAA
TCTGATGTCGCCTTGCAGGAGGCTCGCACCTGGGACGAGGGCGTCTCCACCAAATTCTCCACTACCCCAGTTTCCGAGATCTTCAAGGTTCGTGTTAATGGCTCCCTTTTCTGTGAGTAG
TAGCATGTGTTGGTATTGTGGGTTGTCGTTGCCTTGTGCTTTCCCCTGGTATTAGCCAGCGGTGGTTTCAACTTGATTACTTAAAAATAGTAGAACTAGCAATTTAGGTTATTTCGGATA
ACTGGTGGCGTTTTCTGTTCAACTAGATTTAGAACTGTATCGTCTCTTTCATGTTTTTTCCTTTTTATAAATCTTGGCAATGGCGTCAAGAGGATTGTTCCTGCGTTCCTTGCATTGACC
GCAGTGTTAGTCAATTGTCTAGAATATTCGTCCCACAGTACTTCGAGAAGTAAGCCCGTTGTGGGAGTTGGTGACCATTGTGTGTTGTGAACAAATGTGAAAAGATCGTGACAGTTCTGA
TCAGAATTCTAACATTCATTTCCTTTATGTATTTAAATGTTTTGTAGGGGGGAAGAAGGTTGCTATCTTTGGTCTTCCTGTAAGTGCTCGCTCACCTTGACATCTTAACTTTCACCTTGT
TAATTTGAAGATGGTTTTGTTGTTACACATGCCTGTCCTTCAATTGTCAATTTTTGGGTTAGGAAGCTTGACCTGGATGAGCACAATTTGTTTGGTCCTTGAAGGTGTGAAGGGCACGAG
ATTACCGATTTGAAGTTGCTCTTATCTTTCTCTGCAGGGGGTGCATTCACAGGGGTTTGTTCTCAGAAACATGTGCCAAGTTTCCTGAACAACTCAGACAAGTTGAAATCGAAGGGAATA
GACTCCATTGTGTGTGTCTCTGTGAACGATCCCTACACCATGAATGCCTGGGCAGAGAAGCTGGGTGCCAAGGACAAGGTTGGTCGTGACCATTTCTCACTCAGTAAACATTCACGAATC
CTCTTCTAGTAACGATTTTTTTTTTTCTTTTCCCCTCCGTTCCTGCACACCTTCAAAAGCAATGCAGATCGATTTCATTAGAAGTATCAATTTGCTTAGCTGATTCATGGATGTCTCCAG
ATATCAAATTTTATGGTGATTTCGACGGCAAGTTCCACAAATCTCTTGGCCTCGACCTCGATCTGTCAGGCGCTCTTCTCGGACCTCGCTCTCAAAGGTAAGCTTTCATGTTAGTTACCA
CTGGACTTGATGGAATCTTAGTCTTGCACCATCTTTGTGCAATCGTTTGTCTCATTACAAACTCTGTGCACGTAAGAAGTGAAATGGCATACATGTATATTGCAGGTGTACGCGGCAGTC
GTTGAGGACGGAAAAATCAAACAATTGAACGTTGAGGAAGTCCCGTCAGACTTCAAAGTATCCGACGCCGAAACACTGTTGAAAGGACTGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCTTTCATGGTGAGGCAGCGAGGGCAGGGGCTGTGGAAGAATGCGATGGCCATGGGCCAGCAGTACATGCAGCTTCGGCAGATGGGCTCGGCCGCTAAGAAGATCGATCTAGAA
TCTGATGTCGCCTTGCAGGAGGCTCGCACCTGGGACGAGGGCGTCTCCACCAAATTCTCCACTACCCCAGTTTCCGAGATCTTCAAGGGGAAGAAGGTTGCTATCTTTGGTCTTCCTGGT
GCATTCACAGGGGTTTGTTCTCAGAAACATGTGCCAAGTTTCCTGAACAACTCAGACAAGTTGAAATCGAAGGGAATAGACTCCATTGTGTGTGTCTCTGTGAACGATCCCTACACCATG
AATGCCTGGGCAGAGAAGCTGGGTGCCAAGGACAAGATCAAATTTTATGGTGATTTCGACGGCAAGTTCCACAAATCTCTTGGCCTCGACCTCGATCTGTCAGGCGCTCTTCTCGGACCT
CGCTCTCAAAGGTACGCGGCAGTCGTTGAGGACGGAAAAATCAAACAATTGAACGTTGAGGAAGTCCCGTCAGACTTCAAAGTATCCGACGCCGAAACACTGTTGAAAGGACTGTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AATTCGTGAA CATGCACATG TCCATCTGGA CGTTCTATCT ATCTATAGTA CTATGCGCAA ATTCGTGGAT GTGACAAAAG CAATGGATTC GGGGATCACC AGTGCGCATT TCGTCCCTTT  GCCAGCAAGC AGAGCTCTTG TGCAACCCTT ATTTTTGTGC GTCCAATCCT CAAGGCCGAT TAATTTCTCG TCTCTGCTAC TCTAGTGCGA TAACCCATCT GTTGTTTTAG CCATTTGAAG  CTTTAGGGTC GCCATCTGGG CTTCGCAGCG ATGGCAGCTT TCATGGTGAG GCAGCGAGGG CAGGGGCTGT GGAAGAATGC GATGGCCATG GGCCAGCAGT ACATGCAGCT TCGGCAGATG  GGCTCGGCCG CTAAGAAGAT CGATCTAGAA TCTGATGTCG CCTTGCAGGA GGCTCGCACC TGGGACGAGG GCGTCTCCAC CAAATTCTCC ACTACCCCAG TTTCCGAGAT CTTCAAGGGG  AAGAAGGTTG CTATCTTTGG TCTTCCTGGT GCATTCACAG GGGTTTGTTC TCAGAAACAT GTGCCAAGTT TCCTGAACAA CTCAGACAAG TTGAAATCGA AGGGAATAGA CTCCATTGTG  TGTGTCTCTG TGAACGATCC CTACACCATG AATGCCTGGG CAGAGAAGCT GGGTGCCAAG GACAAGATCA AATTTTATGG TGATTTCGAC GGCAAGTTCC ACAAATCTCT TGGCCTCGAC  CTCGATCTGT CAGGCGCTCT TCTCGGACCT CGCTCTCAAA GGTACGCGGC AGTCGTTGAG GACGGAAAAA TCAAACAATT GAACGTTGAG GAAGTCCCGT CAGACTTCAA AGTATCCGAC  GCCGAAACAC TGTTGAAAGG ACTGTAGAAC AATGCAGTTA ATGTTGGTGG AGGTTCGTAG AGTTTATGTA GCAGGAGAAT CACGTCCTTT GCACACGTGA CTTGGAAACT TATAACTTAT  TGTGACAATT GTAATCACCG CCAACGTTAT GCCAACCCCC GTCCGCCGGG TGCTACCTAC TGAACATGCC AATCTTAGTA GACAGAGGAC ATGGACAAAT ACGGTTCTCA CAAATTCTAT 
TCTCG 

Retrieve as FASTA